Classification of EPSP Synthase

5-enolpyruvylshikimate-3-phosphate synthase (EPSPS)

PRE-COMPUTED DATASETS

Putative Active Site: PF00275 (txt,csv) | COG0128 (txt,csv) | PDB (txt,csv) | NCBI (txt,csv)

HOW TO CITE THIS RESOURCE

Servers and datasets: Leino L, Tall T, Helander M, Saloniemi I, Saikkonen K, Ruuskanen S, Puigbo P. (2021) Classification of the glyphosate target enzyme (5-enolpyruvylshikimate-3-phosphate synthase) for assessing sensitivity of organisms to the herbicide. Journal of Hazardous Materials,408:124556

ATGC Dataset: Rainio MJ, Ruuskanen S, Helander M, Saikkonen K, Saloniemi I, Puigbo P. (2021) Adaptation of bacteria to glyphosate: a microevolutionary perspective of the enzyme 5-enolpyruvylshikimate 3-phosphate synthase. Environmental Microbiology Reports, doi: 10.1111/1758-2229.12931. Online ahead of print.

Video Protocol: Mathew SA, Muola A, Saikkonen A, Saloniemi I, Helander M, Puigbo P. (2022) Quantification of the Potential Impact of Glyphosate-Based Products on Microbiomes. J. Vis. Exp., e63109, doi:10.3791/63109.

Human Microbiota: Puigbo P, Leino LI, Rainio MJ, Saikkonen K, Saloniemi I, Helander M. (2022) Does Glyphosate Affect the Human Microbiota?. Life, 12(5), 707; https://doi.org/10.3390/life12050707

Glyphosate on fungi: Tall T, Puigbo P. (2022) Rethinking the Intrinsic Sensitivity of Fungi to Glyphosate. Biotech, 11(3), 28; https://doi.org/10.3390/biotech11030028

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