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| Abbrev | Code | Location | StopCodon | +4nt | +456nt | Upstream |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:59019-60560 | UAA | U | UUU | UUUUACCACU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:61562-62947 | UAA | U | UCA | UCAGUCUUUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:63009-63431 | UAA | U | UCA | UCAUCUGGUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c89085-88978 | UAA | U | UAU | UAUUUGGUUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:125702-126910 | UAA | A | ACU | ACUACGCUCA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:150023-150550 | UAA | C | CCG | CCGUUGAAAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:160286-161065 | UAA | G | GCG | GCGUUUAACU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:184024-184350 | UAA | U | UUC | UUCACCUGUC |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:184591-185850 | UAA | A | AUG | AUGUAUAAAU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:218319-218555 | UAA | U | UCG | UCGCGACAUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:218580-218735 | UAA | U | UAA | UAACUUUAUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:227552-228130 | UAA | U | UUA | UUAAUUUUUG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c273607-272252 | UAA | A | AAU | AAUUUAGUUC |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c323463-323161 | UAG | U | UAU | UAUUGCUAAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c362960-362868 | UAA | A | AGG | AGGAUAACUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c382519-382385 | UGA | A | AUU | AUUUACUACA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:423437-423664 | UAA | G | GUA | GUAAUCUGUG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:423682-424134 | UAA | G | GCU | GCUAAUAGGG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:438097-438864 | UAA | U | UUU | UUUAUAACUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:445407-446474 | UAG | U | UUA | UUAGUUAUUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:462423-463679 | UAA | G | GAU | GAUGCUUUAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c480669-479980 | UAA | C | CAA | CAAUGGCUUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:549482-551083 | UAA | U | UAU | UAUCGAAUUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:552484-553779 | UAA | G | GAU | GAUUGAUUCU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c569746-568730 | UAA | C | CUA | CUAAUUUGAU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:611378-613195 | UAA | U | UGU | UGUAAAUAUG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:616947-617252 | UAA | U | UUA | UUAUUAACUC |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:617272-617661 | UAA | U | UUC | UUCACGGGAG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:617672-618205 | UAA | G | GGA | GGAGAAUAAU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:619276-619710 | UAG | G | GGU | GGUAAUACUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:621720-622109 | UAA | U | UAC | UACACAAUGG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:623821-624225 | UAA | G | GCG | GCGCUUUUUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c632334-630856 | UAA | A | ACG | ACGAAAGUUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c698008-695813 | UAG | A | AGC | AGCUCCAGAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:729351-730610 | UAG | G | GUU | GUUUCAUUGC |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c737863-737654 | UAG | C | CUU | CUUUUAUCUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c831454-830975 | UAA | U | UUU | UUUGAACCAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c893221-891860 | UAG | A | AAA | AAAAUAAUUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:964651-966297 | UAG | U | UCA | UCACAGAAAU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:977194-977769 | UAA | U | UUU | UUUAUGCUUG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c1011057-1008217 | UAA | G | GAU | GAUAGUAAAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:1043267-1045804 | UAA | C | CUU | CUUUAAGGUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c1084092-1081594 | UAA | G | GUC | GUCAUCGUUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:1104545-1105768 | UAG | U | UAA | UAAUAAAGAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c1151079-1150276 | UAA | U | UAU | UAUUUUACUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:1155494-1155877 | UAG | A | ACG | ACGCUCUUUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c1193569-1191506 | UAA | C | CGG | CGGAGAUAAC |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c1205070-1204810 | UAA | U | UAU | UAUUUUAUCG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:1258768-1258896 | UAA | U | UUC | UUCGAACCGU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:1264150-1265733 | UGA | A | ACU | ACUCAAUAUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c1266743-1265937 | UAA | U | UAG | UAGUAACUAG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:1310018-1310407 | UAA | U | UUG | UUGAAAAUUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:1310695-1313592 | UAA | U | UUU | UUUUCGGUCA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:1335032-1335139 | UAG | U | UUA | UUAACCAGUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:1463147-1463239 | UAG | U | UUC | UUCACAUUCA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c1482153-1480090 | UAG | A | AGG | AGGAAUGCGU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:1507645-1507806 | UAA | U | UUU | UUUUCGAUCU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:1573322-1573786 | UAG | U | UGU | UGUUACUAGC |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:1597017-1597745 | UAA | U | UUU | UUUCUGAACU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:1597880-1598728 | UAA | U | UUU | UUUCAGUUAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c1622728-1622204 | UAA | U | UUC | UUCGUUUUAU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c1709606-1709514 | UAA | U | UGU | UGUCGGCUUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:1781427-1781981 | UAA | U | UUG | UUGAUGCGAU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:1811437-1811787 | UAA | U | UAC | UACUUACUAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:1812587-1812727 | UAA | U | UAG | UAGAAAAUGA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c1825307-1825206 | UGA | A | AAU | AAUUAUAUAG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c1927204-1926929 | UAG | A | AAG | AAGAUGGAGG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:2034624-2034728 | UAA | C | CGC | CGCGCAGUUC |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c2034997-2034878 | UAA | U | UUA | UUAAACUUGU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c2144782-2144507 | UAG | C | CCA | CCAUUGUAUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c2235031-2234744 | UAA | U | UUA | UUAGGUAACC |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:2303666-2304094 | UAA | C | CUA | CUAGUAUCUC |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:2305298-2305567 | UAA | G | GUA | GUAAUGGCAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:2305949-2308066 | UAA | U | UAG | UAGCAAUUUG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c2315535-2314249 | UAA | U | UUA | UUAUGUAAAG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:2318602-2319309 | UAA | G | GGA | GGAGCAUUGU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:2322493-2323968 | UAA | U | UAA | UAAAUACCAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:2324157-2325323 | UAA | G | GUG | GUGUAUAUCU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:2325323-2326195 | UAA | U | UGU | UGUCUGUAUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c2378914-2377463 | UAG | G | GCU | GCUAACGCUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:2396853-2397599 | UAA | G | GCG | GCGAUUACUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:2397760-2397993 | UAA | G | GCC | GCCUUGAUUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:2433740-2435401 | UAA | U | UUG | UUGUUAAUAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c2439434-2438430 | UAA | U | UAU | UAUUCCUUAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:2455403-2455675 | UAA | A | AGU | AGUUCGUUUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:2614204-2614437 | UAA | U | UAU | UAUUAAUUUG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:2659969-2661111 | UAA | G | GCG | GCGCCACUUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c2695076-2693676 | UAG | U | UUA | UUAUUGAGCU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:2728260-2728364 | UAA | U | UAA | UAAUUACUGC |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c2784869-2784663 | UAG | U | UCU | UCUUUUCAAU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:2877151-2878098 | UAA | G | GGG | GGGUUUAAUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:2879866-2880084 | UAA | U | UUU | UUUUUUGCAG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:2915357-2917021 | UAA | G | GCC | GCCAGUAACU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c2922349-2921870 | UAA | U | UAC | UACUCUUUAG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c2944454-2943792 | UGA | G | GAC | GACUGGCCUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c3041078-3040719 | UAA | U | UCU | UCUUUUCUUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c3141996-3141001 | UAA | U | UAC | UACGCUAUUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:3327017-3328057 | UAA | C | CAG | CAGUUAACAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c3350592-3349180 | UAA | G | GUA | GUAGCUAACG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c3416352-3415984 | UAA | G | GCU | GCUAACGCUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:3556153-3557655 | UAG | A | AGG | AGGUUGCUAU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c3583004-3582600 | UAA | A | AGC | AGCACCAACU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c3621891-3620836 | UAA | A | AGA | AGACAAAAUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:3695399-3696343 | UAA | G | GUA | GUACUAGUUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:3696640-3697275 | UAA | U | UUC | UUCCUGACAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c3750419-3748896 | UAA | U | UAG | UAGCCACAUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:3818309-3822280 | UAA | A | AUC | AUCUAGUUAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:3833560-3834312 | UAA | U | UCU | UCUUUUUGCU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:3834309-3835235 | UGA | G | GUA | GUAUUUUAGU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c3883751-3883656 | UAA | C | CUC | CUCAAACAUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c3973882-3972671 | UAA | C | CCU | CCUUAGCGGC |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:4016256-4017320 | UAA | C | CGG | CGGCGACUUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:4043798-4045786 | UAA | G | GAU | GAUAGUUUAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:4046986-4048161 | UAA | G | GCA | GCAAAUGAGU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:4048601-4049665 | UAA | U | UAA | UAACAUUGCU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c4052303-4052208 | UAA | C | CAU | CAUCAUCGAU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c4081045-4080941 | UAA | U | UGU | UGUUAGCCAG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c4085418-4084900 | UAG | U | UUA | UUAACACUUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:4385657-4386382 | UAA | U | UCA | UCACAAUUAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:4414694-4414951 | UAA | C | CGU | CGUUAAUCGU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c4444980-4443352 | UAG | U | UUA | UUAUUUUUGC |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c4486456-4486025 | UAA | A | AUA | AUAAUAGUAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c4597249-4597037 | UAG | U | UAC | UACGUAUUUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c4813951-4812908 | UAA | U | UUU | UUUGCAAUAU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c4858471-4857644 | UAA | A | AAC | AACAAUGAGU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c4994283-4993714 | UAA | C | CCA | CCAGUUCACG |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:5036303-5038057 | UAA | G | GCU | GCUUUAACUU |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c5043337-5042153 | UAA | U | UAC | UACCACAACA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:c5096383-5094950 | UAA | U | UAG | UAGAUAGAUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:5137617-5139479 | UAA | A | AAU | AAUGCCUUUA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:5163943-5165010 | UAA | A | AAC | AACUGAAAAA |
| cpsy | NC_003910.7 | >ref|NC_003910.7|:5280130-5281320 | UAG | U | UUA | UUAGCACUUU |