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| Abbrev | Code | Location | StopCodon | +4nt | +456nt | Upstream |
| mmar | NC_005791.1 | >ref|NC_005791.1|:72602-73564 | UAA | U | UUU | UUUAAAAUUA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:c74390-74160 | UAA | U | UUA | UUAAAUAACU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:c87817-87608 | UAA | U | UUA | UUACUUUUUU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:161607-161750 | UAA | U | UUA | UUAAAUCUGG |
| mmar | NC_005791.1 | >ref|NC_005791.1|:167490-167915 | UAA | U | UCC | UCCAUUACUU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:168917-169072 | UAA | G | GUA | GUAAUUUUAU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:211168-211401 | UAA | U | UUA | UUAAAAUAUC |
| mmar | NC_005791.1 | >ref|NC_005791.1|:c251442-251152 | UAA | U | UAU | UAUUGGAAUA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:c259915-259616 | UAA | U | UUU | UUUAAGAACC |
| mmar | NC_005791.1 | >ref|NC_005791.1|:c301604-301467 | UAA | U | UUA | UUAAAUUUCC |
| mmar | NC_005791.1 | >ref|NC_005791.1|:c370065-369232 | UAA | U | UUU | UUUUUCCAUG |
| mmar | NC_005791.1 | >ref|NC_005791.1|:c384262-384080 | UAA | U | UUA | UUAAACUUUU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:441246-441449 | UAA | U | UAU | UAUGGCAGCU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:c572407-571721 | UAA | U | UUC | UUCUUUUAAU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:c619149-618916 | UAA | A | AUU | AUUUUUUGAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:658446-659123 | UAA | U | UUU | UUUAUUUAUU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:844090-844917 | UAA | U | UUC | UUCCUCUUUU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:845702-847135 | UAA | A | AUA | AUAAAGUAAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:847128-848516 | UGA | G | GUU | GUUAAACGUA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:c940636-940241 | UAA | G | GCC | GCCCAAAAUA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1036729-1038489 | UAA | U | UUA | UUAAAAUUAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1038524-1039912 | UAA | C | CCU | CCUAAUUUAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:c1045514-1044633 | UAA | U | UUC | UUCAGAAGCU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:c1120247-1119759 | UAA | U | UUU | UUUUAAUUAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:c1137365-1137171 | UAA | U | UUC | UUCUUUUAAU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1173159-1174130 | UAA | U | UCU | UCUAAUUAAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1192748-1194088 | UAA | A | AUU | AUUAAUAUAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1194298-1194672 | UAA | U | UUA | UUACCUUUUU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1198055-1199104 | UAA | A | AUU | AUUAACUCUU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1200340-1200732 | UAA | C | CUU | CUUCAUCAGG |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1229443-1230501 | UAA | A | AUA | AUAAUUACAU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1230524-1230766 | UAA | U | UUU | UUUGAAUAUU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:c1243420-1242092 | UAA | C | CUA | CUAAGAUUUU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1308338-1308751 | UAA | U | UUG | UUGGUGAUUU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1308765-1309169 | UAA | U | UUG | UUGAGGUGAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1310751-1310939 | UAA | U | UUA | UUAUUUUUCU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:c1327652-1327452 | UAA | A | AUA | AUAUUAAUUA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1347723-1348166 | UAA | G | GGU | GGUGAUUUUA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1348200-1348766 | UAA | A | AUU | AUUAAGAUCU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1348868-1351051 | UAA | A | AUU | AUUAAAUACU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1351135-1352421 | UAA | A | ACA | ACAAGUACCA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1352470-1352778 | UAA | U | UUU | UUUAGCUUAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1365076-1365924 | UAA | U | UUU | UUUUAAUUCG |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1383244-1383408 | UAA | C | CUU | CUUCUUUUAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1383440-1383709 | UAA | A | AUU | AUUAAUCUAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1384030-1384491 | UAA | U | UUU | UUUCACCAAU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1384502-1385137 | UAA | U | UGG | UGGUGAAACA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1386287-1386616 | UAA | G | GGU | GGUGAUGUAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1386637-1387035 | UAA | U | UCC | UCCUUUAAAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1387426-1388160 | UAA | U | UUA | UUAGGCAUGU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1388189-1388734 | UAA | U | UGC | UGCCCAUAAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1388744-1388905 | UAA | G | GGU | GGUGAAAGAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1388924-1389316 | UAA | G | GGA | GGACAAGGAG |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1389338-1389886 | UAA | G | GGA | GGACAUUAUG |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1389896-1390303 | UAA | G | GGU | GGUGGUCUCA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1390803-1391384 | UAA | U | UCU | UCUCGCUUAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1391395-1392072 | UAA | G | GGU | GGUGAUAUAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1392583-1393014 | UAA | U | UUU | UUUAUUACUU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:c1405604-1405125 | UAA | U | UUC | UUCAAUUAAG |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1499911-1500669 | UAA | U | UUA | UUACUCAAAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1500691-1500951 | UAA | G | GCU | GCUCAAUACG |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1501753-1502238 | UAA | U | UUC | UUCGAUUUAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1509697-1511028 | UAA | U | UUG | UUGGAAUCCA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1512134-1512916 | UAA | G | GGU | GGUAAUAAAC |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1512964-1514625 | UAA | C | CUA | CUAAAUUUUA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1517711-1518430 | UAA | A | AUU | AUUCUAUAAU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1518447-1519208 | UAA | G | GGA | GGAGGAGGUG |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1519462-1520421 | UGA | G | GUA | GUAAAUGUCU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1528686-1529141 | UAA | U | UUA | UUAAUUUGUU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1556252-1557160 | UAA | U | UCG | UCGAAUUAAU |
| mmar | NC_005791.1 | >ref|NC_005791.1|:c1577461-1577219 | UAA | U | UUC | UUCUUUUUAA |
| mmar | NC_005791.1 | >ref|NC_005791.1|:1584652-1585041 | UAA | U | UUA | UUAAACUAUU |