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| Abbrev | Code | Location | StopCodon | +4nt | +456nt | Upstream |
| pacn | NC_006085.1 | >ref|NC_006085.1|:162739-163731 | UGA | U | UGG | UGGCGAAUCU |
| pacn | NC_006085.1 | >ref|NC_006085.1|:173823-175121 | UGA | C | CGU | CGUAACAGUA |
| pacn | NC_006085.1 | >ref|NC_006085.1|:c183081-181699 | UGA | G | GUA | GUACUCCGGC |
| pacn | NC_006085.1 | >ref|NC_006085.1|:c392860-391709 | UGA | C | CAC | CACUUCGGGC |
| pacn | NC_006085.1 | >ref|NC_006085.1|:599061-600341 | UGA | U | UCG | UCGUGCAUUG |
| pacn | NC_006085.1 | >ref|NC_006085.1|:c621886-621380 | UGA | C | CUG | CUGACGCUAU |
| pacn | NC_006085.1 | >ref|NC_006085.1|:c680415-679498 | UGA | G | GCC | GCCCGAUAGG |
| pacn | NC_006085.1 | >ref|NC_006085.1|:c740111-738690 | UGA | G | GUC | GUCGCCGUAA |
| pacn | NC_006085.1 | >ref|NC_006085.1|:789789-790301 | UGA | U | UGA | UGACCGCUAU |
| pacn | NC_006085.1 | >ref|NC_006085.1|:843812-845245 | UGA | G | GUA | GUAGCUAGCC |
| pacn | NC_006085.1 | >ref|NC_006085.1|:854597-856093 | UGA | U | UCG | UCGCGGGUAU |
| pacn | NC_006085.1 | >ref|NC_006085.1|:897632-898639 | UGA | U | UUC | UUCUACUUUU |
| pacn | NC_006085.1 | >ref|NC_006085.1|:898762-899970 | UGA | U | UCU | UCUCACCAUC |
| pacn | NC_006085.1 | >ref|NC_006085.1|:899970-900749 | UGA | U | UGU | UGUCCCGUAC |
| pacn | NC_006085.1 | >ref|NC_006085.1|:909691-909999 | UGA | U | UCA | UCAGGCAGUU |
| pacn | NC_006085.1 | >ref|NC_006085.1|:910011-910280 | UGA | G | GGU | GGUAGACAGA |
| pacn | NC_006085.1 | >ref|NC_006085.1|:956567-957559 | UGA | U | UCC | UCCCCACGAC |
| pacn | NC_006085.1 | >ref|NC_006085.1|:c979307-979041 | UGA | C | CGA | CGACGAUGCC |
| pacn | NC_006085.1 | >ref|NC_006085.1|:c1065829-1065584 | UGA | G | GGA | GGACAUAUUC |
| pacn | NC_006085.1 | >ref|NC_006085.1|:c1196202-1195744 | UGA | G | GGU | GGUGUAUUCC |
| pacn | NC_006085.1 | >ref|NC_006085.1|:1296934-1297281 | UGA | G | GCA | GCAUUCCAAA |
| pacn | NC_006085.1 | >ref|NC_006085.1|:1335132-1336535 | UGA | U | UCU | UCUGAGACCG |
| pacn | NC_006085.1 | >ref|NC_006085.1|:c1534943-1534572 | UGA | U | UCU | UCUUUCCGUG |
| pacn | NC_006085.1 | >ref|NC_006085.1|:1899521-1900504 | UGA | G | GCG | GCGACCGCUC |
| pacn | NC_006085.1 | >ref|NC_006085.1|:c1916401-1915508 | UGA | U | UCG | UCGACCCGAC |
| pacn | NC_006085.1 | >ref|NC_006085.1|:c1994645-1994109 | UGA | U | UCC | UCCGUAGGCC |
| pacn | NC_006085.1 | >ref|NC_006085.1|:c2180061-2178487 | UGA | G | GUU | GUUCCGACCC |
| pacn | NC_006085.1 | >ref|NC_006085.1|:2278033-2278341 | UGA | G | GGU | GGUCUUACUU |
| pacn | NC_006085.1 | >ref|NC_006085.1|:2282705-2283520 | UAG | C | CGG | CGGUGAACGU |
| pacn | NC_006085.1 | >ref|NC_006085.1|:2285027-2286121 | UGA | C | CCC | CCCACCCUCC |
| pacn | NC_006085.1 | >ref|NC_006085.1|:2320819-2321400 | UGA | G | GCA | GCAUGCACAU |
| pacn | NC_006085.1 | >ref|NC_006085.1|:2321679-2322800 | UGA | G | GUA | GUAUCGCUAA |
| pacn | NC_006085.1 | >ref|NC_006085.1|:2335970-2337637 | UGA | G | GCA | GCACUACUCA |
| pacn | NC_006085.1 | >ref|NC_006085.1|:2365576-2366217 | UGA | U | UUC | UUCAUCCGUG |
| pacn | NC_006085.1 | >ref|NC_006085.1|:2381756-2383180 | UGA | C | CUA | CUAUCCUGCG |
| pacn | NC_006085.1 | >ref|NC_006085.1|:c2406290-2405472 | UGA | U | UCG | UCGCCACAUG |