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| Abbrev | Code | Location | StopCodon | +4nt | +456nt | Upstream |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c140524-140006 | UAA | G | GCA | GCACUGCCCG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:182883-184157 | UGA | U | UCG | UCGCCAUGAC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c244708-243311 | UGA | U | UGU | UGUGAGGGAG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c310283-308133 | UAA | U | UUG | UUGAUUCUGU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:355076-355858 | UAA | C | CUG | CUGGCAGGCU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c401465-400455 | UGA | C | CCC | CCCACUGAGU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:442416-443684 | UAA | G | GAC | GACUGGCUGC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:455633-460078 | UGA | U | UCC | UCCCUGACCC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:509745-510323 | UAA | A | AAG | AAGCAGCUGC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c515237-513828 | UAA | U | UUG | UUGCACGCUU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:677323-677748 | UAA | U | UAC | UACUUCGCCG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:677777-678007 | UAA | U | UCC | UCCACGGACC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:678963-679409 | UGA | G | GAC | GACCAGGUAG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c737368-737153 | UAA | G | GCA | GCAAUACGUA |
| psyr | NC_005773.3 | >ref|NC_005773.3|:837320-837595 | UAA | U | UCA | UCAGGCUGCA |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c841221-840943 | UAA | U | UCA | UCACGCAGUU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:1000302-1000880 | UGA | U | UUC | UUCGCGCCUA |
| psyr | NC_005773.3 | >ref|NC_005773.3|:1044514-1045530 | UAA | A | ACC | ACCCCGAGCA |
| psyr | NC_005773.3 | >ref|NC_005773.3|:1069139-1069480 | UAA | G | GCU | GCUUUAGCUU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c1132836-1131805 | UGA | U | UUC | UUCUGUCGGG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:1250729-1251214 | UAA | G | GGC | GGCAUUCUGA |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c1261334-1261038 | UGA | U | UUU | UUUGUGCUGC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c1355599-1352753 | UGA | U | UUG | UUGACUCGGC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:1513017-1513352 | UGA | G | GUA | GUACUGAUUG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c1517735-1516920 | UGA | G | GCA | GCAGUAACUU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:1521491-1521877 | UAA | U | UUU | UUUAAAGUCG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:1525372-1525797 | UAA | G | GCA | GCAGGCAGGC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:1543651-1545120 | UAA | G | GUC | GUCAUUUUUG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:1545226-1546803 | UGA | U | UCC | UCCGGACUGC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:1571687-1571944 | UGA | U | UCU | UCUCGCGUCC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:1573292-1573642 | UGA | G | GUC | GUCUUAUGAA |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c1602244-1602035 | UGA | U | UAC | UACAGUUUUU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:1794100-1794810 | UGA | G | GUC | GUCGAUGGGU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c1804632-1804252 | UAA | G | GCG | GCGGAAAAAA |
| psyr | NC_005773.3 | >ref|NC_005773.3|:1904835-1905071 | UAA | U | UUU | UUUCUUGUCC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c1939743-1939201 | UAA | G | GAU | GAUUUGUAAU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:1962953-1964236 | UGA | U | UUU | UUUCUCUUUU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:1966990-1967262 | UAA | C | CAC | CACACGCAGG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c1970258-1969464 | UAA | G | GCC | GCCUCUCGAU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:2136535-2136705 | UGA | C | CGG | CGGUCGUCUG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:2151802-2153265 | UAA | C | CUG | CUGAGCGACU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c2312486-2310831 | UAA | A | AUG | AUGUUGAACG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:2322701-2324473 | UAA | A | AUG | AUGACGAUCC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:2324486-2325190 | UAA | G | GGG | GGGGUGACCG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:2328323-2329543 | UGA | U | UUG | UUGAUCGUUU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:2329714-2331150 | UGA | U | UGA | UGAGGCAGCC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:2331359-2332525 | UGA | G | GAC | GACAACAAGA |
| psyr | NC_005773.3 | >ref|NC_005773.3|:2332525-2333406 | UAA | U | UGA | UGAGCGUCCU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:2335774-2337681 | UAA | G | GCU | GCUUCACUGU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c2340011-2338788 | UGA | U | UAG | UAGCCGGUUG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:2445105-2445449 | UAA | U | UUA | UUAGCCGCUU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c2490200-2489988 | UGA | U | UGU | UGUAACGGGA |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c2556981-2556664 | UAA | G | GUC | GUCCCCGACA |
| psyr | NC_005773.3 | >ref|NC_005773.3|:2627405-2627968 | UGA | U | UUU | UUUUCGAUUG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c2700791-2700510 | UGA | G | GUC | GUCGCAUGAA |
| psyr | NC_005773.3 | >ref|NC_005773.3|:3601989-3603359 | UAA | G | GCG | GCGGCAUGAG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:3813267-3814091 | UGA | C | CAC | CACGCAAAAA |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c3920708-3919860 | UGA | U | UCC | UCCGAAGCGC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c4180248-4178536 | UAA | G | GCA | GCACGAAAGC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:4258810-4259523 | UGA | U | UGC | UGCCAGCCAU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c4260816-4260277 | UGA | U | UUG | UUGCCCUGAC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:4295151-4296398 | UAG | C | CGC | CGCUUAUAGG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c4317584-4317084 | UGA | U | UGG | UGGGUACGAU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:4332394-4334109 | UAA | U | UCG | UCGCAGCUCA |
| psyr | NC_005773.3 | >ref|NC_005773.3|:4345006-4346349 | UGA | G | GUC | GUCAAAAGGC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c4356465-4355401 | UAA | G | GCA | GCACAGCCCC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c4418342-4417695 | UGA | U | UGC | UGCUGUGUGC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c4428120-4426618 | UAA | G | GCG | GCGACUGAGC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:4612948-4614399 | UAA | G | GCU | GCUUCAAACG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:4615638-4617161 | UGA | U | UAG | UAGCAGAACG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:4645239-4645820 | UAA | G | GUA | GUAACGAUGG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c4660905-4659262 | UGA | U | UUC | UUCCAGCCUC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c4771570-4771217 | UGA | U | UCC | UCCUCGUCAC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c5033239-5032853 | UGA | U | UAA | UAAGCCUCGU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:5075886-5077229 | UGA | C | CCC | CCCGGGGAGA |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c5137900-5137403 | UAA | G | GCC | GCCAGUGUGU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:5309454-5309981 | UAG | G | GCC | GCCAGUUGAU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:5392609-5393862 | UGA | U | UCA | UCACUGAUCU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c5411836-5410130 | UGA | G | GUC | GUCAGGAGUA |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c5506828-5504864 | UAA | A | AAA | AAACCAGUAA |
| psyr | NC_005773.3 | >ref|NC_005773.3|:5555056-5556345 | UGA | U | UCC | UCCAGCCGCG |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c5576330-5576115 | UGA | U | UCC | UCCGAGCGCC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c5632916-5632626 | UGA | A | AAA | AAACAGUGAA |
| psyr | NC_005773.3 | >ref|NC_005773.3|:5688423-5689967 | UAA | G | GGC | GGCUGCAGAC |
| psyr | NC_005773.3 | >ref|NC_005773.3|:5756381-5756764 | UAA | U | UUA | UUAGCGUCCU |
| psyr | NC_005773.3 | >ref|NC_005773.3|:c5912765-5911386 | UAG | A | ACC | ACCUUGUGAA |