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| Abbrev | Code | Location | StopCodon | +4nt | +456nt | Upstream |
| saga | NC_004116.1 | >ref|NC_004116.1|:76288-76596 | UAA | C | CAG | CAGCAGUCGA |
| saga | NC_004116.1 | >ref|NC_004116.1|:76701-77327 | UAA | U | UUU | UUUGAUUUCU |
| saga | NC_004116.1 | >ref|NC_004116.1|:77351-77974 | UAA | U | UAA | UAAGAAAGGA |
| saga | NC_004116.1 | >ref|NC_004116.1|:77974-78270 | UAA | U | UGA | UGAAUUUGUA |
| saga | NC_004116.1 | >ref|NC_004116.1|:78288-79121 | UAA | U | UCU | UCUAAGGAGG |
| saga | NC_004116.1 | >ref|NC_004116.1|:79220-79498 | UAA | U | UAG | UAGGUUAAUA |
| saga | NC_004116.1 | >ref|NC_004116.1|:79514-79858 | UAA | U | UAG | UAGGAGGAGG |
| saga | NC_004116.1 | >ref|NC_004116.1|:79871-80524 | UAA | G | GGA | GGAGGUAAAA |
| saga | NC_004116.1 | >ref|NC_004116.1|:80528-80941 | UAA | C | CAA | CAAAUGUUAG |
| saga | NC_004116.1 | >ref|NC_004116.1|:80951-81157 | UAA | G | GGA | GGAGAAGACA |
| saga | NC_004116.1 | >ref|NC_004116.1|:81183-81443 | UAA | U | UAG | UAGAUUGGGA |
| saga | NC_004116.1 | >ref|NC_004116.1|:81468-81836 | UAA | U | UCA | UCAAACUAAA |
| saga | NC_004116.1 | >ref|NC_004116.1|:81916-82221 | UAA | U | UCU | UCUCAGAUUA |
| saga | NC_004116.1 | >ref|NC_004116.1|:82245-82787 | UAA | U | UCA | UCACGAAGGA |
| saga | NC_004116.1 | >ref|NC_004116.1|:83145-83543 | UAA | U | UCU | UCUAGGAGGU |
| saga | NC_004116.1 | >ref|NC_004116.1|:83653-84189 | UAA | A | AAU | AAUUUUACCU |
| saga | NC_004116.1 | >ref|NC_004116.1|:84665-85159 | UAA | U | UAG | UAGGAUUGAU |
| saga | NC_004116.1 | >ref|NC_004116.1|:85174-85353 | UAA | G | GAA | GAAAGGGGAU |
| saga | NC_004116.1 | >ref|NC_004116.1|:85478-85918 | UAA | U | UUA | UUAAAUGCUA |
| saga | NC_004116.1 | >ref|NC_004116.1|:88092-88310 | UAA | U | UUA | UUAAUGAGAG |
| saga | NC_004116.1 | >ref|NC_004116.1|:88470-88835 | UAG | U | UCG | UCGAAAUAAU |
| saga | NC_004116.1 | >ref|NC_004116.1|:88880-89236 | UAA | A | AAU | AAUAGGAGGU |
| saga | NC_004116.1 | >ref|NC_004116.1|:90239-90625 | UAA | U | UCA | UCAUAGCAUU |
| saga | NC_004116.1 | >ref|NC_004116.1|:105338-107167 | UAA | U | UUU | UUUUUAUCAA |
| saga | NC_004116.1 | >ref|NC_004116.1|:113600-114883 | UAA | U | UUA | UUAUUAAUAU |
| saga | NC_004116.1 | >ref|NC_004116.1|:115072-115647 | UAA | U | UUG | UUGCUUAUUA |
| saga | NC_004116.1 | >ref|NC_004116.1|:136869-137750 | UAG | A | ACG | ACGGGGAUUU |
| saga | NC_004116.1 | >ref|NC_004116.1|:138990-139178 | UAA | U | UUA | UUAACAUAAA |
| saga | NC_004116.1 | >ref|NC_004116.1|:179288-182863 | UAA | U | UAA | UAAACUGAGA |
| saga | NC_004116.1 | >ref|NC_004116.1|:221565-221834 | UAA | A | AUU | AUUUAUCUAG |
| saga | NC_004116.1 | >ref|NC_004116.1|:230809-231255 | UAA | U | UAG | UAGACAACAG |
| saga | NC_004116.1 | >ref|NC_004116.1|:231276-231668 | UAA | G | GAG | GAGGAAAGGA |
| saga | NC_004116.1 | >ref|NC_004116.1|:240870-241160 | UAA | A | AAA | AAACUGCUUU |
| saga | NC_004116.1 | >ref|NC_004116.1|:322251-322565 | UAA | U | UUG | UUGGCUUAUU |
| saga | NC_004116.1 | >ref|NC_004116.1|:358375-358599 | UAA | G | GCA | GCAAGUCAAA |
| saga | NC_004116.1 | >ref|NC_004116.1|:c371842-370931 | UAA | U | UUA | UUAAGUCGUA |
| saga | NC_004116.1 | >ref|NC_004116.1|:485763-487604 | UAA | A | AAA | AAAUAUCUAA |
| saga | NC_004116.1 | >ref|NC_004116.1|:493265-494545 | UAA | U | UAU | UAUCCAAAGU |
| saga | NC_004116.1 | >ref|NC_004116.1|:517969-518244 | UAA | U | UUA | UUAAAAUGAU |
| saga | NC_004116.1 | >ref|NC_004116.1|:542486-543832 | UAA | U | UUC | UUCGUCUAGA |
| saga | NC_004116.1 | >ref|NC_004116.1|:550545-552065 | UAA | U | UAA | UAAAAAAGCG |
| saga | NC_004116.1 | >ref|NC_004116.1|:c552438-552178 | UAA | U | UAU | UAUUUAAAAG |
| saga | NC_004116.1 | >ref|NC_004116.1|:558254-558601 | UAA | G | GCU | GCUACCAAAA |
| saga | NC_004116.1 | >ref|NC_004116.1|:617328-618635 | UAA | U | UUU | UUUUGAUGAU |
| saga | NC_004116.1 | >ref|NC_004116.1|:705289-707232 | UAG | U | UCU | UCUCAGAUUA |
| saga | NC_004116.1 | >ref|NC_004116.1|:732734-733165 | UAA | A | AUU | AUUUUAUUAG |
| saga | NC_004116.1 | >ref|NC_004116.1|:c744595-743105 | UAA | A | AAA | AAAAGAAGCU |
| saga | NC_004116.1 | >ref|NC_004116.1|:758981-759739 | UAA | U | UUU | UUUAACUUAA |
| saga | NC_004116.1 | >ref|NC_004116.1|:759916-760608 | UAA | A | AUC | AUCACAUGAU |
| saga | NC_004116.1 | >ref|NC_004116.1|:786470-787078 | UAA | U | UCU | UCUAAUCUUU |
| saga | NC_004116.1 | >ref|NC_004116.1|:809004-811622 | UAA | U | UAA | UAAAAAACGA |
| saga | NC_004116.1 | >ref|NC_004116.1|:c819574-819350 | UAA | G | GAA | GAAACACCUC |
| saga | NC_004116.1 | >ref|NC_004116.1|:820225-821958 | UAA | G | GAA | GAAAAUGACA |
| saga | NC_004116.1 | >ref|NC_004116.1|:885368-886336 | UGA | G | GAA | GAAUAAUAAA |
| saga | NC_004116.1 | >ref|NC_004116.1|:886411-887409 | UAA | A | AAU | AAUAACCUAA |
| saga | NC_004116.1 | >ref|NC_004116.1|:947803-949305 | UAA | U | UUC | UUCAUAAAAC |
| saga | NC_004116.1 | >ref|NC_004116.1|:c956528-956280 | UAA | U | UUU | UUUUUGAAUU |
| saga | NC_004116.1 | >ref|NC_004116.1|:c966404-965415 | UAA | U | UUU | UUUAAAAUUA |
| saga | NC_004116.1 | >ref|NC_004116.1|:c1311762-1311397 | UAA | A | AUA | AUAAUAACUC |
| saga | NC_004116.1 | >ref|NC_004116.1|:c1441035-1440859 | UAA | U | UAA | UAAAAGACUC |
| saga | NC_004116.1 | >ref|NC_004116.1|:c1526124-1525567 | UAG | U | UAC | UACGUCUAGA |
| saga | NC_004116.1 | >ref|NC_004116.1|:1754753-1754983 | UAG | U | UUU | UUUGUAUUCG |
| saga | NC_004116.1 | >ref|NC_004116.1|:c1758877-1757531 | UAG | A | AAA | AAAGGAGUUA |
| saga | NC_004116.1 | >ref|NC_004116.1|:c1901430-1901089 | UAA | U | UAA | UAACCAGGAG |
| saga | NC_004116.1 | >ref|NC_004116.1|:2090838-2091020 | UAA | U | UUA | UUAAAAAAGA |
| saga | NC_004116.1 | >ref|NC_004116.1|:2091036-2091185 | UAA | U | UAG | UAGAAGGGAG |