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| Abbrev | Code | Location | StopCodon | +4nt | +456nt | Upstream |
| shae | NC_007168.1 | >ref|NC_007168.1|:18395-18841 | UAA | U | UUC | UUCAUUAGUU |
| shae | NC_007168.1 | >ref|NC_007168.1|:20726-22009 | UAA | G | GAA | GAAGCGGAUA |
| shae | NC_007168.1 | >ref|NC_007168.1|:32834-32977 | UAA | A | AAA | AAAAGGUGUG |
| shae | NC_007168.1 | >ref|NC_007168.1|:152947-153171 | UAA | G | GGC | GGCUCUACGU |
| shae | NC_007168.1 | >ref|NC_007168.1|:157900-158199 | UAA | U | UAU | UAUGAAUUAU |
| shae | NC_007168.1 | >ref|NC_007168.1|:c230483-230049 | UAA | U | UUU | UUUUAUGACU |
| shae | NC_007168.1 | >ref|NC_007168.1|:467042-467206 | UAA | U | UUU | UUUGAAAUCA |
| shae | NC_007168.1 | >ref|NC_007168.1|:c468668-467778 | UAA | U | UAA | UAAAUAUUAG |
| shae | NC_007168.1 | >ref|NC_007168.1|:532285-534024 | UAG | G | GAU | GAUUUACUAA |
| shae | NC_007168.1 | >ref|NC_007168.1|:c557644-556652 | UAA | G | GAA | GAAAUAGAUU |
| shae | NC_007168.1 | >ref|NC_007168.1|:c623709-622666 | UAA | G | GAU | GAUAGUUAGU |
| shae | NC_007168.1 | >ref|NC_007168.1|:666972-667487 | UAG | U | UCA | UCAACAACAA |
| shae | NC_007168.1 | >ref|NC_007168.1|:727807-728454 | UAA | U | UCA | UCACUAGUUA |
| shae | NC_007168.1 | >ref|NC_007168.1|:c776496-775849 | UAA | G | GGA | GGAGGUCAUA |
| shae | NC_007168.1 | >ref|NC_007168.1|:819378-819686 | UAG | G | GAG | GAGGUAAUAA |
| shae | NC_007168.1 | >ref|NC_007168.1|:819714-820376 | UAA | U | UAG | UAGAAAAUUU |
| shae | NC_007168.1 | >ref|NC_007168.1|:822239-822517 | UAA | U | UAA | UAAGUAGCGA |
| shae | NC_007168.1 | >ref|NC_007168.1|:822545-822898 | UAA | U | UAA | UAAAUAGAAG |
| shae | NC_007168.1 | >ref|NC_007168.1|:822922-823575 | UAA | U | UAA | UAACUAUUUA |
| shae | NC_007168.1 | >ref|NC_007168.1|:824238-824501 | UAA | U | UAA | UAAUGUUACU |
| shae | NC_007168.1 | >ref|NC_007168.1|:824533-824901 | UAA | U | UAC | UACAAGAUUA |
| shae | NC_007168.1 | >ref|NC_007168.1|:824937-825254 | UAA | U | UUU | UUUAUAAAAA |
| shae | NC_007168.1 | >ref|NC_007168.1|:825280-825819 | UAA | U | UAA | UAACUAGUUG |
| shae | NC_007168.1 | >ref|NC_007168.1|:826059-826457 | UAA | U | UCU | UCUCUAAAAG |
| shae | NC_007168.1 | >ref|NC_007168.1|:826482-827018 | UAA | U | UAA | UAAUAAAUAA |
| shae | NC_007168.1 | >ref|NC_007168.1|:827050-827412 | UAA | U | UAG | UAGAUAACUC |
| shae | NC_007168.1 | >ref|NC_007168.1|:827433-827933 | UAA | U | UUU | UUUAAAGGAG |
| shae | NC_007168.1 | >ref|NC_007168.1|:831135-831500 | UAA | G | GGA | GGAGGGAAAA |
| shae | NC_007168.1 | >ref|NC_007168.1|:831523-831912 | UAA | U | UAG | UAGGUAAAGG |
| shae | NC_007168.1 | >ref|NC_007168.1|:832962-833333 | UAA | U | UUU | UUUAUAAUAG |
| shae | NC_007168.1 | >ref|NC_007168.1|:838803-839240 | UAA | U | UUC | UUCAAGAUAU |
| shae | NC_007168.1 | >ref|NC_007168.1|:839260-839652 | UAA | U | UUA | UUAGAAGGAG |
| shae | NC_007168.1 | >ref|NC_007168.1|:843832-844260 | UAA | U | UGC | UGCUGGAAUU |
| shae | NC_007168.1 | >ref|NC_007168.1|:844276-844791 | UAA | U | UUG | UUGGAGGAAU |
| shae | NC_007168.1 | >ref|NC_007168.1|:856226-856756 | UAA | G | GGA | GGAAGAUGUG |
| shae | NC_007168.1 | >ref|NC_007168.1|:889333-891138 | UAA | U | UAA | UAAUAGAUUU |
| shae | NC_007168.1 | >ref|NC_007168.1|:917498-918355 | UAG | U | UUC | UUCGUCUAAA |
| shae | NC_007168.1 | >ref|NC_007168.1|:923730-923987 | UAA | A | AUA | AUAAUGUAAU |
| shae | NC_007168.1 | >ref|NC_007168.1|:933175-933387 | UAA | U | UUA | UUAUAAGUUU |
| shae | NC_007168.1 | >ref|NC_007168.1|:942579-943286 | UAA | G | GAA | GAAAAUUUCA |
| shae | NC_007168.1 | >ref|NC_007168.1|:c1007355-1006732 | UAA | U | UAU | UAUAGUAAUU |
| shae | NC_007168.1 | >ref|NC_007168.1|:1034038-1034211 | UGA | A | AAA | AAAGACCAAU |
| shae | NC_007168.1 | >ref|NC_007168.1|:1058834-1060261 | UAA | U | UAA | UAAUAGUAAU |
| shae | NC_007168.1 | >ref|NC_007168.1|:c1066179-1065679 | UAA | U | UUA | UUAAAGAUUU |
| shae | NC_007168.1 | >ref|NC_007168.1|:1124654-1124998 | UAA | A | AUU | AUUUAAAAGU |
| shae | NC_007168.1 | >ref|NC_007168.1|:1172445-1172756 | UAA | U | UUG | UUGUUAGCAC |
| shae | NC_007168.1 | >ref|NC_007168.1|:1191538-1191963 | UAA | U | UCA | UCAUGCAUAA |
| shae | NC_007168.1 | >ref|NC_007168.1|:1206330-1206836 | UAA | U | UCU | UCUUGAUUUU |
| shae | NC_007168.1 | >ref|NC_007168.1|:1215366-1217033 | UAA | U | UAU | UAUGAUUCAA |
| shae | NC_007168.1 | >ref|NC_007168.1|:c1235486-1234884 | UAG | U | UAG | UAGAUUGAAG |
| shae | NC_007168.1 | >ref|NC_007168.1|:1265263-1266531 | UAA | U | UAU | UAUCAAUUUU |
| shae | NC_007168.1 | >ref|NC_007168.1|:1282880-1283080 | UAA | U | UUU | UUUAUUUACA |
| shae | NC_007168.1 | >ref|NC_007168.1|:1283135-1283491 | UAA | U | UUG | UUGUAAUUGA |
| shae | NC_007168.1 | >ref|NC_007168.1|:1285345-1286649 | UAA | U | UUG | UUGAUUUAUA |
| shae | NC_007168.1 | >ref|NC_007168.1|:1305615-1305737 | UAA | U | UAA | UAAUUCAUUG |
| shae | NC_007168.1 | >ref|NC_007168.1|:1307417-1307725 | UAA | C | CUA | CUAAAUUGAG |
| shae | NC_007168.1 | >ref|NC_007168.1|:1308061-1308345 | UAA | U | UUU | UUUAUGAUUA |
| shae | NC_007168.1 | >ref|NC_007168.1|:1330443-1330577 | UAA | U | UUU | UUUUUGUCUA |
| shae | NC_007168.1 | >ref|NC_007168.1|:1341363-1341677 | UAA | U | UUA | UUAAAUUUUU |
| shae | NC_007168.1 | >ref|NC_007168.1|:c1364934-1364683 | UAG | U | UUU | UUUUCUAGAU |
| shae | NC_007168.1 | >ref|NC_007168.1|:1376421-1376597 | UAA | U | UUG | UUGCUAACCG |
| shae | NC_007168.1 | >ref|NC_007168.1|:1396071-1396493 | UAA | U | UUA | UUAAUAACUC |
| shae | NC_007168.1 | >ref|NC_007168.1|:1397018-1397548 | UAA | A | AAU | AAUUUUAUGA |
| shae | NC_007168.1 | >ref|NC_007168.1|:1399838-1399987 | UAA | U | UUC | UUCUAUAUCU |
| shae | NC_007168.1 | >ref|NC_007168.1|:1416253-1416810 | UAA | U | UAA | UAACUCAUCU |
| shae | NC_007168.1 | >ref|NC_007168.1|:1461245-1462423 | UAG | U | UUA | UUAACAGUAG |
| shae | NC_007168.1 | >ref|NC_007168.1|:1465141-1465413 | UAA | U | UCU | UCUCAAGUUA |
| shae | NC_007168.1 | >ref|NC_007168.1|:1523711-1524211 | UAA | U | UUU | UUUACUUAAA |
| shae | NC_007168.1 | >ref|NC_007168.1|:1547911-1548111 | UAA | U | UGA | UGAAAGAACA |
| shae | NC_007168.1 | >ref|NC_007168.1|:1561633-1562583 | UAA | U | UAA | UAAAUAGAUU |
| shae | NC_007168.1 | >ref|NC_007168.1|:1564728-1565603 | UAA | U | UAA | UAAUCAUUAU |
| shae | NC_007168.1 | >ref|NC_007168.1|:c1605169-1602464 | UAA | U | UAU | UAUUCUGUAA |
| shae | NC_007168.1 | >ref|NC_007168.1|:c1921424-1921158 | UAA | U | UGA | UGAAGCAAUU |
| shae | NC_007168.1 | >ref|NC_007168.1|:1978880-1979056 | UAA | U | UUA | UUAUUAAGAA |
| shae | NC_007168.1 | >ref|NC_007168.1|:c2067249-2066041 | UAA | G | GAA | GAAGGUAUAC |
| shae | NC_007168.1 | >ref|NC_007168.1|:c2140765-2139461 | UAG | G | GAU | GAUAUAGAAU |
| shae | NC_007168.1 | >ref|NC_007168.1|:c2404269-2403280 | UAA | U | UUU | UUUCUUUGUG |
| shae | NC_007168.1 | >ref|NC_007168.1|:2605025-2605594 | UAG | U | UUC | UUCUAAAAGU |
| shae | NC_007168.1 | >ref|NC_007168.1|:c2631487-2631245 | UAA | G | GGA | GGAGGCAUUA |