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| Abbrev | Code | Location | StopCodon | +4nt | +456nt | Upstream |
| tcru | NC_007520.2 | >ref|NC_007520.2|:61689-62312 | UAA | U | UGU | UGUUUAACAG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:c158298-158047 | UAA | C | CGA | CGAUUCAAAU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:189475-190470 | UAA | U | UAA | UAAAACAAUC |
| tcru | NC_007520.2 | >ref|NC_007520.2|:c283051-282440 | UAA | U | UAU | UAUUAAGCUU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:293974-294975 | UAA | U | UUA | UUAUUUGUUU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:295138-296319 | UAA | G | GUU | GUUACGGCUG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:296525-297967 | UAA | G | GCU | GCUAAGUUAU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:298068-299132 | UAG | G | GAA | GAAACCAAGG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:312524-313228 | UAA | G | GUU | GUUUUUAGUU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:328853-330043 | UAA | U | UCU | UCUUUUUGAG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:331253-331681 | UAA | U | UAA | UAAUUAGCAC |
| tcru | NC_007520.2 | >ref|NC_007520.2|:331681-332376 | UAA | U | UGG | UGGGAAUGGC |
| tcru | NC_007520.2 | >ref|NC_007520.2|:332554-333054 | UAA | G | GAG | GAGAUUUCUC |
| tcru | NC_007520.2 | >ref|NC_007520.2|:333094-333465 | UAA | G | GCU | GCUUACGUAU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:337709-341935 | UAA | A | AAC | AACUUCUUCU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:342074-342448 | UGA | U | UUC | UUCAUUGAAU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:343042-345144 | UAA | U | UAA | UAAUUCCUUA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:345179-346369 | UAA | U | UUU | UUUAAAAUUU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:346503-346814 | UAA | U | UAA | UAAUUAGCAC |
| tcru | NC_007520.2 | >ref|NC_007520.2|:346877-347515 | UAA | U | UUA | UUAGCUUGGU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:347526-348146 | UAA | G | GGU | GGUGGGCGUG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:348143-348439 | UGA | G | GUA | GUAAAGAACG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:348451-349278 | UAA | G | GAG | GAGGGUUUGU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:349290-349562 | UAA | G | GGA | GGAAGGACCC |
| tcru | NC_007520.2 | >ref|NC_007520.2|:349574-349906 | UAA | G | GGA | GGAGAGAUAA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:349918-350604 | UAA | G | GGA | GGAGAGUCAG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:350619-351032 | UAA | A | AAG | AAGGAAUACU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:351034-351222 | UAA | G | GAU | GAUGACUUCA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:351225-351488 | UAA | G | GAA | GAAUGGCUGG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:352329-352871 | UAA | U | UAA | UAAAAGUAGA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:352881-353186 | UAG | A | AGG | AGGUUUCUCA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:353607-354140 | UAA | G | GGA | GGAUAAAUAU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:354524-355033 | UAA | A | AGG | AGGUUGGGAA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:355225-355659 | UAA | A | AAU | AAUGUCAGAU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:355662-356975 | UGA | U | UUA | UUAUGAAUAG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:357074-357430 | UAA | U | UUU | UUUUAAUUUA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:357451-357840 | UAA | G | GCA | GCAUAAAUUA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:357857-358477 | UAA | A | AAU | AAUUCAGAGG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:358504-359493 | UAA | A | ACC | ACCCUUUGAA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:359511-359897 | UAA | U | UUU | UUUAAAGGAA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:390403-390717 | UAA | A | AAU | AAUAAGAAGC |
| tcru | NC_007520.2 | >ref|NC_007520.2|:390817-391074 | UAA | U | UUU | UUUUUAAAUU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:393950-395584 | UAA | U | UUA | UUAAAUAGUC |
| tcru | NC_007520.2 | >ref|NC_007520.2|:397729-398070 | UAA | U | UUU | UUUAAAUUGG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:444278-444859 | UAA | U | UUU | UUUCUAAAAC |
| tcru | NC_007520.2 | >ref|NC_007520.2|:c476655-475276 | UAA | U | UUU | UUUUUAACGU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:480418-480768 | UAA | U | UAG | UAGAUAAUUU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:481014-481832 | UAA | U | UUU | UUUUAAUUAA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:c497658-497203 | UAA | U | UAA | UAAAAAUCAG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:517202-517630 | UAA | A | ACG | ACGCUAAGAA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:517644-518036 | UAA | G | GAG | GAGGGAUUUG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:521125-522162 | UAA | G | GCU | GCUUUAUUUC |
| tcru | NC_007520.2 | >ref|NC_007520.2|:547715-547978 | UAA | U | UGU | UGUAAAGCUC |
| tcru | NC_007520.2 | >ref|NC_007520.2|:c600439-599033 | UAA | U | UUA | UUACCAGCGU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:673599-673946 | UAA | U | UUA | UUACGACGCG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:677893-678294 | UAA | G | GUU | GUUGUUUCAA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:c679376-678546 | UAA | C | CCC | CCCACUUAAA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:727224-727571 | UAA | U | UUA | UUAUGUUAAG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:746823-747389 | UAA | G | GUU | GUUUUAUAAC |
| tcru | NC_007520.2 | >ref|NC_007520.2|:777161-777703 | UAG | G | GUU | GUUGGAGAAA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:777721-777894 | UAA | A | AUU | AUUCAGGAGA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:781985-782221 | UAA | U | UCU | UCUUUUUAUG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:897272-897763 | UAA | U | UUU | UUUCUUUGCG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:916929-918344 | UAA | U | UUA | UUAUUACCGU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:918390-918734 | UAA | G | GUU | GUUUCGUCUU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:922956-923246 | UAA | A | ACC | ACCCAAACGU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:923273-923566 | UAA | U | UUA | UUAAUUUUCU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:923593-923901 | UAA | G | GAC | GACUUUUUCU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:949045-950961 | UAA | G | GUU | GUUAUUUUUA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:960903-961379 | UAA | U | UUC | UUCUUUUACG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:961981-962343 | UAA | U | UUG | UUGUCUUGGU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:1013384-1013590 | UAA | G | GCC | GCCACCUUGU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:1015115-1015738 | UAG | A | AGA | AGAGUGAAAU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:1029207-1029440 | UAG | G | GUC | GUCAAUAGGG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:c1053264-1052929 | UAA | C | CGU | CGUGUUUUUU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:c1131887-1131681 | UAA | G | GAC | GACAUCCUUG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:1210101-1211588 | UAA | U | UGA | UGAAAUUCGG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:1216970-1217236 | UAA | U | UCU | UCUAGGAGGG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:c1231292-1229895 | UAA | G | GAA | GAAUCGCCAA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:1288095-1288367 | UAA | G | GCA | GCAAGCGCGC |
| tcru | NC_007520.2 | >ref|NC_007520.2|:1311327-1313000 | UAA | G | GAU | GAUAAAAUCC |
| tcru | NC_007520.2 | >ref|NC_007520.2|:c1375147-1373867 | UAA | U | UUG | UUGUAAUUCA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:c1392478-1391945 | UAA | U | UUU | UUUAAGACGG |
| tcru | NC_007520.2 | >ref|NC_007520.2|:c1477844-1477392 | UAA | U | UUC | UUCACGGUUC |
| tcru | NC_007520.2 | >ref|NC_007520.2|:c1520117-1519686 | UAA | U | UUU | UUUAAUUCAC |
| tcru | NC_007520.2 | >ref|NC_007520.2|:1624994-1626238 | UAA | G | GCU | GCUAAGCGUU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:c1675349-1675035 | UAA | U | UCU | UCUCAAAUAA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:c1818592-1818236 | UAA | U | UUC | UUCUAUUCAU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:2100986-2101138 | UAA | G | GGG | GGGAGCCCGA |
| tcru | NC_007520.2 | >ref|NC_007520.2|:c2161297-2160398 | UAA | G | GUU | GUUUUACCAU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:2298008-2298925 | UAA | A | AAC | AACGGCUUUU |
| tcru | NC_007520.2 | >ref|NC_007520.2|:c2333131-2332715 | UAA | U | UUA | UUACCCCCUA |