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| Abbrev | Code | Location | StopCodon | +4nt | +456nt | Upstream |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c52708-52433 | UAA | U | UUC | UUCUUCUUUG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c69941-69009 | UAA | U | UUU | UUUUAGCGGA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c96937-96170 | UGA | U | UGA | UGAACACCAA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:119972-120187 | UAA | U | UAA | UAAGUAAAUA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:210924-211511 | UAA | U | UUA | UUAUCGCCCG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:212265-213065 | UAA | U | UAU | UAUCUGACCC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:215246-215620 | UAA | U | UUU | UUUGACUUAG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:215717-216187 | UAA | U | UGG | UGGUUCUCCG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:216281-218389 | UAA | U | UAU | UAUCCCGCAG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:218462-219646 | UAA | G | GCU | GCUUUCGGGU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:221655-221966 | UAA | U | UUU | UUUUUCUGAU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:221999-222628 | UAA | U | UCA | UCAGGUCAUU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:222645-223250 | UAA | C | CGU | CGUCGAGGAG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:223247-223549 | UGA | U | UUC | UUCGUGAAGA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:223566-224390 | UAA | G | GUC | GUCGGAGGAG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:224698-225030 | UAA | U | UUA | UUAGAGGAUA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:225048-225746 | UGA | G | GAC | GACUCUGGAG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:227177-227491 | UAA | G | GGA | GGAGAAUCGC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:227506-228045 | UAA | U | UUU | UUUGGAGUAA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:228398-228790 | UAA | G | GGU | GGUAGGGUUA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:229348-229701 | UAA | U | UUC | UUCGGGAGGA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:229716-230219 | UAA | G | GGU | GGUAGAGGUG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:230222-230401 | UAA | C | CCA | CCAUGGCAAA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:230405-230839 | UAA | C | CAG | CAGAUGCGUU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:232212-232328 | UAA | G | GUA | GUAGCAGAUG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:232476-232832 | UGA | U | UUU | UUUAUCUUGC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:232849-233238 | UAA | U | UCG | UCGGGGUGAU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:233269-233889 | UAA | C | CGC | CGCUGCUUUU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:234945-235334 | UAA | A | AGC | AGCUUAGUAC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:299025-299603 | UAA | U | UCU | UCUGUAAACG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:299787-300362 | UAA | U | UCA | UCAUUCCCUU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:361243-361536 | UAA | C | CGA | CGACUGCCCG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:361583-363229 | UAA | U | UCA | UCACGCUCUC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:365600-366166 | UAA | U | UGC | UGCUCCCAGC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c369118-368384 | UAA | G | GCC | GCCGUGAUAG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:392614-393912 | UAA | C | CCA | CCAAUGCGUA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:459643-460866 | UAA | U | UUA | UUAACUGGCU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:490204-491157 | UAG | C | CGC | CGCACAAGGC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:497339-499249 | UAA | U | UUG | UUGACAUCGC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c503350-503087 | UAA | U | UCG | UCGCCCUUAA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:609376-612090 | UAA | U | UUU | UUUCCGAAUA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c692850-692692 | UAA | U | UAC | UACUUGCGCU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:798592-799797 | UAA | U | UAA | UAAACCGCCA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c994765-994379 | UAA | U | UAA | UAAACCGCCA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c1080537-1080046 | UAA | A | AUU | AUUUCAUUCC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:1186217-1187074 | UAA | U | UAA | UAAGUCCGGC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:1195917-1196414 | UAA | U | UGC | UGCUCCAAAU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c1214542-1213727 | UAA | A | AAC | AACAUGCCUU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:1262346-1263218 | UAA | U | UGU | UGUCUAUUUU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:1268903-1270069 | UAA | U | UCA | UCAAGAAAGU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:1271532-1272038 | UAA | G | GGU | GGUUUGAUUG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c1281048-1280296 | UAA | G | GAG | GAGAAUCGCA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c1360624-1359182 | UAG | A | AAA | AAAUAAUGUU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c1421070-1420786 | UAA | U | UUC | UUCUGAUUAU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c1598888-1597698 | UAA | U | UAA | UAACGGGGGG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:1711305-1712312 | UAG | U | UGA | UGACCCGUCA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:1756276-1757685 | UAA | U | UCA | UCACUGUGAC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:1777163-1777480 | UAA | U | UCC | UCCCUUUAAC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c1791315-1789948 | UAA | G | GGU | GGUUUAUCCA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:1824120-1824356 | UGA | G | GUA | GUAGUACUUG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:1866223-1867476 | UAA | G | GCG | GCGAACAUGC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:1883773-1883985 | UAG | U | UUC | UUCUGACGUA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:1989489-1989698 | UAA | U | UUG | UUGGCCUUUG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:2086661-2087770 | UAA | U | UCA | UCAGCGUUUG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c2283232-2282141 | UAA | U | UUC | UUCGACGGCA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c2428153-2427149 | UAA | G | GCG | GCGUUAUCGC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:2613025-2613630 | UAG | C | CCC | CCCCAUUGAG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:2636489-2636992 | UAA | G | GCC | GCCGAGUGAU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:2689564-2690976 | UAA | G | GUA | GUAUCACCAC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:2691297-2691533 | UAA | U | UUC | UUCCAACGCG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c2732316-2731960 | UAA | U | UAU | UAUUACUUCC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:2830226-2830486 | UAA | U | UUU | UUUAUUUUGC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c2861359-2860817 | UAA | U | UCG | UCGACUAAUA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:2881104-2883257 | UAA | A | AUA | AUAAUACUUC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:2917054-2917263 | UAA | U | UCU | UCUUUGGGUU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c2933495-2930913 | UAA | G | GUA | GUAGCCCAUA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:3032552-3032935 | UAA | U | UUC | UUCACAUUAC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:3089861-3091084 | UAA | U | UUC | UUCUUAGACG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:3092975-3093505 | UAA | G | GCU | GCUUAAACGC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c3206681-3205218 | UAA | U | UUA | UUACAGAUUU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c3250325-3249072 | UAA | U | UUC | UUCCACGCAA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c3280284-3279799 | UAA | U | UAC | UACCGCUCGU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:3345454-3345963 | UAA | U | UCA | UCAACGCGCU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:3430215-3430709 | UAG | G | GCC | GCCGUAUCAA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:3439389-3440303 | UAA | U | UGA | UGACGGCUUA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c3475667-3475023 | UAA | C | CCA | CCAUGCUGGA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c3672318-3671971 | UAA | U | UAA | UAAGAUUUAA |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c3852718-3852287 | UAA | U | UUA | UUAAUCAAAC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c3948352-3947900 | UAG | U | UUC | UUCUGCGUAU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c4065295-4065083 | UAA | U | UCC | UCCCUCCCCC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:4142000-4142518 | UAG | U | UCA | UCAGCCAAAG |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c4145842-4144571 | UAA | U | UAU | UAUUGUAUUU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c4154034-4152388 | UAA | C | CUG | CUGUCUACUC |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c4513441-4511834 | UAA | U | UUA | UUAUAUUGAU |
| ypestis | NC_003143.1 | >ref|NC_003143.1|:c4585138-4584782 | UAA | U | UUC | UUCGCUUAUC |