Bacteroides fragilis NCTC 9343, complete genome - 1..5205140 Location Strand Length PID Gene Synonym Code COG Product 25097-25675 + 192 60679617 rbr BF0020 - COG1592C putative rubrerythrin 54894-55127 + 77 60679648 - BF0051 - - hypothetical protein 74735-76027 + 430 60679675 tyrS BF0079 - COG0162J putative tyrosyl-tRNA synthetase 1 195005-196267 - 420 60679773 - BF0178 - COG0304IQ putative 3-oxoacyl-[acyl-carrier-protein] synthase II 196283-196519 - 78 60679774 acpP BF0179 - COG0236IQ putative acyl carrier protein 235681-236943 + 420 60679812 - BF0218 - COG0195K transcription elongation factor NusA 265179-266693 + 504 60679834 gpmI BF0241 - COG0696G phosphoglyceromutase 276015-276269 - 84 60679840 rpsT BF0247 - COG0268J 30S ribosomal protein S20 334274-337477 + 1067 60679881 - BF0288 - COG1629P,COG4206H putative TonB dependent receptor outer membrane protein 337485-339371 + 628 60679882 - BF0289 - - putative lipoprotein 339391-340098 + 235 60679883 - BF0290 - - hypothetical protein 359630-359923 + 97 60679895 - BF0305 - - hypothetical protein 429964-431505 + 513 60679942 glyS BF0354 - COG0423J glycyl-tRNA synthetase 481258-482700 + 480 60679978 gadB BF0393 - COG0076E putative glutamate decarboxylase 506236-507255 + 339 60680002 ptaA BF0423 - COG0280C putative phosphate acetyltransferase 507274-508470 + 398 60680003 ackA BF0424 - COG0282C putative acetate kinase 513514-514080 - 188 60680009 efp BF0431 - COG0231J elongation factor P 514274-514435 + 53 60680010 - BF0432 - COG0230J 50S ribosomal protein L34 526843-527352 - 169 60680024 - BF0447 - - putative outer membrane protein 594597-594950 - 117 60680082 - BF0513 - - 50S ribosomal protein L19 701719-702576 + 285 60680152 - BF0586 - COG1196D hypothetical protein 705770-708751 - 993 60680156 - BF0590 - COG4771P,COG4206H putative surface membrane protein 715846-718881 + 1011 60680160 - BF0594 - COG4771P hypothetical protein 731661-733307 + 548 60680167 fumB BF0601 - COG1838C putative fumarate hydratase class I, anaerobic 778479-778793 + 104 60680203 trxA BF0642 - COG0526OC putative thioredoxin 824236-824919 - 227 60680237 - BF0678 - - hypothetical protein 1025508-1026332 - 274 60680382 - BF0831 - COG0284F putative orotidine 5'-phosphate decarboxylase 1033487-1034431 - 314 60680391 hemH BF0840 - - phosphoribosylaminoimidazole-succinocarboxamide synthase 1049570-1050964 - 464 60680404 - BF0853 - COG0673R putative GFO/IDH/MOCA family oxidoreductase 1068866-1070503 - 545 60680414 - BF0863 - - putative outer membrane protein 1070525-1073572 - 1015 60680415 - BF0864 - COG4771P,COG1629P hypothetical protein 1074153-1075913 - 586 60680416 - BF0865 - - hypothetical protein 1087602-1090946 + 1114 60680422 - BF0871 - COG1629P hypothetical protein 1090965-1092749 + 594 60680423 - BF0872 - - possible outer membrane protein 1097424-1098107 - 227 60680427 - BF0876 - - hypothetical protein 1106086-1107087 - 333 60680436 gap BF0885 - COG0057G putative glyceraldehyde 3-phosphate dehydrogenase 1122305-1123162 + 285 60680444 - BF0894 - COG0623I putative enoyl-[acyl-carrier-protein] reductase [NADH] 1133908-1134720 + 270 60680454 nagB BF0905 - COG0363G glucosamine-6-phosphate deaminase 1163210-1163479 - 89 60680478 rpmA BF0929 - - 50S ribosomal protein L27 1163502-1163819 - 105 60680479 - BF0930 - - putative 50S ribosomal protein L21 1199461-1201254 + 597 60680506 rpsA BF0959 - COG0539J putative 30S ribosomal protein S1 1241380-1242705 + 441 60680534 - BF0991 - - hypothetical protein 1244707-1246845 + 712 60680538 - BF0994 - - hypothetical protein 1282592-1283161 + 189 60680574 adk BF1032 - COG0563F adenylate kinase 1300651-1300785 + 44 60680586 - BF1047 - - hypothetical protein 1418224-1419837 + 537 60680685 - BF1160 - - hypothetical protein 1421890-1422480 - 196 60680689 - BF1164 - COG1825J putative ribosomal L25p family stress protein 1424153-1424479 + 108 60680692 - BF1167 - COG1862U conserved hypothetical protein with preprotein translocase motif 1426141-1426557 + 138 60680695 - BF1170 - - hypothetical protein 1436557-1437750 - 397 60680707 - BF1182 - COG1748E hypothetical protein 1445996-1447915 + 639 60680714 dnaK BF1189 - COG0443O molecular chaperone DnaK 1540845-1541981 - 378 60680803 - BF1285 - COG2885M putative outer membrane protein 1589490-1589594 + 34 60680843 - BF1325 - - hypothetical protein 1765682-1765825 + 47 60681009 - BF1507 - - hypothetical protein 1769824-1771461 - 545 60681013 - BF1511 - - putative outer membrane protein 1771472-1774855 - 1127 60681014 - BF1512 - COG4206H,COG4771P putative outer membrane protein 1809811-1810212 + 133 60681054 - BF1553 - - hypothetical protein 1824339-1824614 - 91 60681069 hup1 BF1568 - - putative histone-like DNA-binding protein HU1 1934446-1935600 - 384 60681155 galK BF1661 - COG0153G putative galactokinase 1935636-1936961 - 441 60681156 - BF1662 - COG0738G putative transmembrane glucose/galactose transporter 1940070-1940279 - 69 60681161 - BF1667 - - hypothetical protein 1942936-1943433 + 165 60681164 - BF1670 - - hypothetical protein 1958578-1960797 - 739 60681177 - BF1683 - - hypothetical protein 1965253-1966329 + 358 60681181 - BF1687 - - hypothetical protein 1967208-1968326 + 372 60681183 - BF1689 - COG2885M putative outer membrane protein 1973213-1975153 + 646 60681188 thrS BF1694 - COG0441J putative threonyl-tRNA synthetase 1975272-1975883 + 203 60681189 infC BF1695 - COG0290J translation initiation factor IF-3 1976247-1976597 + 116 60681191 rplT BF1697 - - 50S ribosomal protein L20 1995684-1996601 + 305 60681206 - BF1712 - COG0329EM putative N-acetylneuraminate lyase 2109152-2111476 + 774 60681303 nahB BF1811 - COG3525G beta-N-acetylhexosaminidase 2158466-2160115 + 549 60681341 - BF1850 - - hypothetical protein 2304597-2305688 + 363 60681463 - BF1975 - - hypothetical protein 2387138-2389927 + 929 60681529 - BF2044 - COG1629P putative TonB-dependent outer membrane receptor protein 2419687-2420364 + 225 60681551 nqrC BF2067 - COG2869C Na(+)-translocating NADH-quinone reductase subunit C 2613064-2613420 - 118 60681716 - BF2237 - COG0526OC putative thioredoxin 2725914-2726651 + 245 60681812 - BF2334 - - hypothetical protein 2743922-2744809 - 295 60681832 fabD BF2352 - COG0331I malonyl CoA-acyl carrier protein transacylase 2755667-2755912 + 81 60681841 rbp BF2361 - COG0724R RNA binding protein 2772087-2772641 - 184 60681855 - BF2375 - - hypothetical protein 2872074-2872898 + 274 60681954 - BF2474 - COG1579R hypothetical protein 2901913-2903103 + 396 60681974 - BF2494 - - hypothetical protein 2912663-2913658 - 331 60681984 - BF2504 - COG0714R putative magnesium chelatase 2918293-2918481 - 62 60681989 rpmG BF2509 - COG0267J 50S ribosomal protein L33 2989970-2990482 - 170 60682045 - BF2565 - - hypothetical protein 3008786-3008986 - 66 60682061 - BF2582 - - hypothetical protein 3042142-3043176 - 344 60682092 galE BF2613 - COG1087M UDP-glucose 4-epimerase 3051507-3053108 + 533 60682103 pyrG BF2624 - COG0504F CTP synthetase 3070986-3071789 - 267 60682118 - BF2639 - COG4105R conserved hypothetical lipoprotein 3179871-3180416 + 181 60682204 rpsP BF2731 - - 30S ribosomal protein S16 3182366-3182734 - 122 60682207 - BF2734 - COG0724R putative RNA-binding protein 3187573-3188676 + 367 60682212 - BF2739 - COG0526OC putative lipoprotein/thioderoxin 3189560-3192103 - 847 60682214 - BF2741 - COG0058G putative glycogen phosphorylase 3194049-3194510 - 153 60682216 - BF2743 - - putative V(vacuolar)-type Na+-ATP synthase subunit K 3200981-3201571 - 196 60682222 - BF2749 - COG1390C putative V-type ATP synthase subunit E 3382321-3382557 + 78 60682382 - BF2912 - - hypothetical protein 3408736-3410379 - 547 60682408 - BF2938 - COG0205G diphosphate--fructose-6-phosphate 1-phosphotransferase 3492437-3492718 - 93 60682472 - BF3002 - - hypothetical protein 3495985-3496371 - 128 60682476 - BF3006 - - hypothetical protein 3509233-3509790 - 185 60682488 - BF3018 - COG1592C putative rubrerythrin-like protein 3538441-3539244 - 267 60682512 - BF3042 - - putative lipoprotein 3541010-3541711 + 233 60682515 - BF3045 - COG0822C hypothetical protein 3541732-3542742 + 336 60682516 - BF3046 - - hypothetical protein 3580066-3580662 - 198 60682546 - BF3077 - COG2825M hypothetical protein 3626612-3627871 + 419 60682576 pgk BF3107 - - phosphoglycerate kinase 3645426-3645830 + 134 60682596 - BF3127 - COG0346E hypothetical protein 3658580-3659584 - 334 60682607 fba BF3138 - COG0191G fructose-bisphosphate aldolase 3661056-3661307 + 83 60682609 rpmE BF3140 - COG0254J 50S ribosomal protein L31 3710593-3714147 + 1184 60682637 nifJ BF3168 - COG1014C,COG0674C,COG1013C putative pyruvate-flavodoxin oxidoreductase 3729432-3730970 - 512 60682650 - BF3181 - - putative lipoprotein 3749935-3751119 + 394 60682664 - BF3195 - COG3579E hypothetical protein 3787952-3789589 - 545 60682691 groEL BF3222 - COG0459O chaperonin GroEL 3789632-3789904 - 90 60682692 groES BF3223 - COG0234O co-chaperonin GroES 3822806-3823270 - 154 60682717 - BF3248 - - putative AraC-family regulatory protein 3839906-3840916 - 336 60682729 - BF3259 - COG0451MG putative UDP-glucuronic acid epimerase 3843125-3843859 - 244 60682732 - BF3262 - COG0463M putative glycosyl transferase 3850702-3850974 - 90 60682738 - BF3268 - - putative lipoprotein 3913336-3913800 - 154 60682785 - BF3317 - COG2030I hypothetical protein 4006151-4006465 + 104 60682856 - BF3394 - - hypothetical protein 4118890-4119507 - 205 60682955 - BF3496 - - hypothetical protein 4152895-4153359 - 154 60682985 - BF3527 - COG0848U hypothetical protein 4153359-4153949 - 196 60682986 - BF3528 - - hypothetical protein 4153986-4154456 - 156 60682987 - BF3529 - - hypothetical protein 4154463-4155284 - 273 60682988 - BF3530 - COG0811U hypothetical protein 4191648-4192238 + 196 60683016 - BF3558 - COG1047O putative isomerase 4198107-4199978 - 623 60683022 - BF3567 - - hypothetical protein 4236922-4239069 - 715 60683043 mutB BF3592 - COG2185I methylmalonyl-CoA mutase 4286531-4286749 + 72 60683079 - BF3629 - - hypothetical protein 4287072-4287515 - 147 60683080 rplI BF3630 - COG0359J putative 50S ribosomal protein L9 4287527-4287799 - 90 60683081 rpsR BF3631 - - putative 30S ribosomal protein S18 4287802-4288146 - 114 60683082 rpsF BF3632 - COG0360J 30S ribosomal protein S6 4398476-4399231 - 251 60683174 tpiA BF3729 - COG0149G triosephosphate isomerase 4429037-4429411 - 124 60683197 - BF3751 - COG3682K putative antibiotic resistance-related regulatory protein 4433020-4433961 - 313 60683199 mdh BF3753 - COG0039C putative malate dehydrogenase 4465980-4466972 - 330 60683229 tsf BF3784 - - elongation factor Ts 4467096-4467932 - 278 60683230 rpsB BF3785 - - 30S ribosomal protein S2 4468053-4468439 - 128 60683231 rpsI BF3786 - - 30S ribosomal protein S9 4468446-4468907 - 153 60683232 rplM BF3787 - - 50S ribosomal protein L13 4471397-4472797 - 466 60683236 - BF3791 - COG1187J putative ribosomal large subunit pseudouridine synthase 4516331-4516642 - 103 60683266 - BF3823 - - hypothetical protein 4585888-4587243 - 451 60683332 - BF3895 - COG0544O putative cell division trigger factor 4588483-4588728 + 81 60683334 - BF3897 - COG0724R putative RNA-binding protein 4613919-4615442 - 507 60683354 purH BF3917 - - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4621651-4622553 - 300 60683359 - BF3922 - - hypothetical protein 4638191-4638937 - 248 60683369 fabG BF3932 - COG1028IQR putative 3-oxoacyl-[acyl-carrier protein] reductase 4652792-4653604 - 270 60683384 - BF3947 - COG0811U putative transmembrane MotA/TolQ/ExbB proton channel family protein 4692510-4692995 - 161 60683410 rplQ BF3975 - COG0203J putative 50S ribosomal protein L17 4692999-4693991 - 330 60683411 rpoA BF3976 - COG0202K DNA-directed RNA polymerase alpha subunit 4694003-4694608 - 201 60683412 rpsD BF3977 - COG0522J 30S ribosomal protein S4 4694728-4695117 - 129 60683413 rpsK BF3978 - COG0100J 30S ribosomal protein S11 4695129-4695509 - 126 60683414 rpsM BF3979 - COG0099J 30S ribosomal protein S13 4696702-4698048 - 448 60683418 secY BF3983 - COG0201U preprotein translocase SecY 4698053-4698499 - 148 60683419 rplO BF3984 - COG0200J putative 50S ribosomal protein L15 4698530-4698706 - 58 60683420 rpmD BF3985 - COG1841J putative 50S ribosomal protein L30 4698717-4699235 - 172 60683421 rpsE BF3986 - COG0098J putative 30S ribosomal protein S5 4699241-4699585 - 114 60683422 rplR BF3987 - COG0256J putative 50S ribosomal protein L18 4699607-4700176 - 189 60683423 rplF BF3988 - COG0097J 50S ribosomal protein L6 4700192-4700587 - 131 60683424 rpsH BF3989 - - putative 30S ribosomal protein S8 4700948-4701505 - 185 60683426 rplE BF3991 - COG0094J 50S ribosomal protein L5 4701505-4701825 - 106 60683427 rplX BF3992 - COG0198J 50S ribosomal protein L24 4703141-4703875 - 244 60683432 rpsC BF3997 - COG0092J putative 30S ribosomal protein S3 4703881-4704237 - 118 60683433 rplV BF3998 - - putative 50S ribosomal protein L22 4704327-4704596 - 89 60683434 rpsS BF3999 - COG0185J 30S ribosomal protein S19 4704617-4705441 - 274 60683435 rplB BF4000 - COG0090J 50S ribosomal protein L2 4705447-4705737 - 96 60683436 rplW BF4001 - COG0089J putative 50S ribosomal protein L23 4705754-4706380 - 208 60683437 rplD BF4002 - - 50S ribosomal protein L4 4706380-4706997 - 205 60683438 rplC BF4003 - - 50S ribosomal protein L3 4707403-4709520 - 705 60683440 fusA BF4005 - COG0480J elongation factor EF-2 4709574-4710050 - 158 60683441 rpsG BF4006 - COG0049J 30S ribosomal protein S7 4710210-4710611 - 133 60683442 rpsL BF4007 - - 30S ribosomal protein S12 4714095-4718378 - 1427 60683449 rpoC BF4014 - COG0086K DNA-directed RNA polymerase beta' subunit 4718525-4722337 - 1270 60683450 rpoB BF4015 - COG0085K DNA-directed RNA polymerase beta subunit 4722442-4722816 - 124 60683451 rplL BF4016 - COG0222J putative 50S ribosomal protein L7/L12 4722865-4723377 - 170 60683452 rplJ BF4017 - COG0244J putative 50S ribosomal protein L10 4723393-4724091 - 232 60683453 rplA BF4018 - - 50S ribosomal protein L1 4725502-4726686 - 394 60683457 tuf BF4022 - COG0050J elongation factor Tu 4728521-4728712 - 63 60683460 - BF4025 - - putative ribosomal protein S21 4741300-4741878 - 192 60683469 - BF4035 - - putative transmembrane protein 4804044-4804265 - 73 60683505 - BF4081 - - hypothetical protein 4854363-4854767 - 134 60683547 - BF4126 - COG0537FGR putative Hit-family protein 4856811-4858937 + 708 60683550 pnpA BF4129 - COG1185J putative polyribonucleotide nucleotidyltransferase 4994622-4997645 + 1007 60683645 - BF4225 - COG0342U putative protein-export transmembrane SecDF protein 5021551-5023158 + 535 60683662 pckA BF4244 - COG1866C phosphoenolpyruvate carboxykinase 5024440-5027655 + 1071 60683664 - BF4246 - COG4771P,COG1629P putative outer membrane protein 5027668-5029668 + 666 60683665 - BF4247 - - hypothetical protein 5054313-5054582 + 89 60683677 rpsO BF4259 - - putative 30S ribosomal protein S15 5074151-5074483 - 110 60683689 - BF4274 - COG0858J putative ribosome-binding factor A 5078605-5080284 + 559 60683695 - BF4280 - - hypothetical protein 5115370-5116233 + 287 60683721 - BF4309 - COG0545O putative isomerase 5162003-5163946 + 647 60683751 - BF4340 - COG1053C succinate dehydrogenase 5163976-5164731 + 251 60683752 - BF4341 - COG0479C succinate dehydrogenase