Corynebacterium diphtheriae NCTC 13129, complete genome - 1..2488635 Location Strand Length PID Gene Synonym Code COG Product 5379-7436 + 685 38232647 gyrB DIP0005 - COG0187L DNA topoisomerase IV subunit B 8792-11362 + 856 38232651 gyrA DIP0009 - COG0188L DNA gyrase subunit A 24888-25430 + 180 38232667 ppiA DIP0025 - COG0652O probable peptidyl-prolyl cis-trans isomerase A 84797-84964 - 55 38232733 - DIP0103 - - hypothetical protein 135343-136104 - 253 38232786 - DIP0161 - COG1028IQR short chain dehydrogenase 136124-137590 - 488 38232787 - DIP0162 - COG0277C Putative oxidoreductase, FAD-binding 145272-146273 + 333 38232798 - DIP0173 - COG0803P hypothetical protein 209792-210235 + 147 38232870 - DIP0247 - COG0590FJ Putative cytosine deaminase 223595-223915 + 106 38232883 - DIP0260 - COG0718S hypothetical protein 236460-237116 + 218 38232894 deoC DIP0273 - COG0274F deoxyribose-phosphate aldolase 237124-238776 + 550 38232895 - DIP0274 - COG1109G Putative mutase 246016-247047 + 343 38232900 asd DIP0279 - COG0136E aspartate-semialdehyde dehydrogenase 247748-249286 + 512 38232902 cat DIP0281 - COG0753P Catalase 270766-271449 - 227 38232924 - DIP0303 - COG0664T Putative transcription regulator 285652-285855 + 67 38232941 cspA DIP0320 - - cold-shock protein 288591-290078 + 495 38232945 - DIP0324 - COG0747E Putative secreted protein 297398-299374 - 658 38232950 - DIP0329 - COG1297S opt family protein. Putative membrane protein 333123-334190 - 355 38232981 slpA DIP0365 - COG0627R surface layer protein A 334658-336067 + 469 38232984 lpd DIP0368 - COG1249C dihydrolipoamide dehydrogenase 338927-340942 + 671 38232987 - DIP0371 - COG1053C succinate dehydrogenase 340942-341691 + 249 38232988 - DIP0372 - COG0479C succinate dehydrogenase 349646-350107 - 153 38232997 - DIP0383 - - hypothetical protein 351641-353347 - 568 38233000 - DIP0386 - COG0318IQ acyl-CoA synthase 356496-357281 + 261 38233003 gpmA DIP0389 - COG0588G phosphoglyceromutase 395838-396629 + 263 38233045 nusG DIP0431 - COG0250K transcription antitermination protein NusG 396774-397202 + 142 38233046 rplK DIP0432 - - 50S ribosomal protein L11 397269-397976 + 235 38233047 rplA DIP0433 - - 50S ribosomal protein L1 399728-400243 + 171 38233050 rplJ DIP0436 - COG0244J 50S ribosomal protein L10 400287-400667 + 126 38233051 rplL DIP0437 - COG0222J 50S ribosomal protein L7/L12 409723-413250 + 1175 38233060 rpoB DIP0446 - COG0085K DNA-directed RNA polymerase beta subunit 413298-417308 + 1336 38233061 rpoC DIP0447 - COG0086K DNA-directed RNA polymerase beta' subunit 436884-437255 + 123 38233079 rpsL DIP0467 - - 30S ribosomal protein S12 437259-437726 + 155 38233080 rpsG DIP0468 - COG0049J 30S ribosomal protein S7 437925-440105 + 726 38233081 fusA DIP0469 - COG0480J elongation factor EF-2 440423-441613 + 396 38233082 tuf DIP0470 - COG0050J elongation factor Tu 443098-443754 + 218 38233085 rplC DIP0473 - - 50S ribosomal protein L3 443751-444404 + 217 38233086 rplD DIP0474 - - 50S ribosomal protein L4 444404-444709 + 101 38233087 rplW DIP0475 - COG0089J 50S ribosomal protein L23 444731-445573 + 280 38233088 rplB DIP0476 - COG0090J 50S ribosomal protein L2 445590-445868 + 92 38233089 rpsS DIP0477 - COG0185J 30S ribosomal protein S19 445872-446234 + 120 38233090 rplV DIP0478 - - 50S ribosomal protein L22 446234-446980 + 248 38233091 rpsC DIP0479 - COG0092J 30S ribosomal protein S3 446984-447400 + 138 38233092 rplP DIP0480 - COG0197J 50S ribosomal protein L16 447400-447630 + 76 38233093 rpmC DIP0481 - - 50S ribosomal protein L29 447633-447911 + 92 38233094 rpsQ DIP0482 - COG0186J 30S ribosomal protein S17 451955-452323 + 122 38233098 rplN DIP0486 - - 50S ribosomal protein L14 452326-452640 + 104 38233099 rplX DIP0487 - COG0198J 50S ribosomal protein L24 452643-453206 + 187 38233100 rplE DIP0488 - COG0094J 50S ribosomal protein L5 479270-480190 - 306 38233120 - DIP0511 - COG0329EM Putative lysine biosynthesis protein 484258-485874 - 538 38233124 - DIP0515 - COG0747E Putative transport system secreted protein 494228-494626 + 132 38233133 rpsH DIP0524 - - 30S ribosomal protein S8 494642-495178 + 178 38233134 rplF DIP0525 - COG0097J 50S ribosomal protein L6 495220-495588 + 122 38233135 rplR DIP0526 - COG0256J 50S ribosomal protein L18 495629-496255 + 208 38233136 rpsE DIP0527 - COG0098J 30S ribosomal protein S5 496259-496444 + 61 38233137 rpmD DIP0528 - COG1841J 50S ribosomal protein L30 496447-496893 + 148 38233138 rplO DIP0529 - COG0200J 50S ribosomal protein L15 508133-509269 - 378 38233148 - DIP0539 - COG3839G Putative sugar ABC transport syste ATP-binding protein 511081-511626 + 181 38233150 adk DIP0541 - COG0563F adenylate kinase 516618-516986 + 122 38233155 rpsM DIP0546 - COG0099J 30S ribosomal protein S13 516990-517394 + 134 38233156 rpsK DIP0547 - COG0100J 30S ribosomal protein S11 517418-518023 + 201 38233157 rpsD DIP0548 - COG0522J 30S ribosomal protein S4 518105-519121 + 338 38233158 rpoA DIP0549 - COG0202K DNA-directed RNA polymerase alpha subunit 519202-519675 + 157 38233159 rplQ DIP0550 - COG0203J 50S ribosomal protein L17 531311-531754 + 147 38233170 rplM DIP0561 - - 50S ribosomal protein L13 531751-532284 + 177 38233171 rpsI DIP0562 - - 30S ribosomal protein S9 543376-543672 + 98 38233184 groES DIP0575 - COG0234O 10 kDa chaperonin 543685-545304 + 539 38233185 groEL DIP0576 - COG0459O chaperonin GroEL 562428-564005 + 525 38233202 guaA DIP0595 - COG0518F,COG0519F bifunctional GMP synthase/glutamine amidotransferase protein 575214-575891 - 225 38233215 - DIP0608 - COG2011P Putative ABC transport system membrane protein 577994-578866 - 290 38233218 - DIP0611 - COG1464P Putative ABC transport system secreted protein 600526-602739 - 737 38233238 icd DIP0631 - - isocitrate dehydrogenase [NADP] 622563-624347 - 594 38233256 accBC DIP0649 - COG4770I acyl coenzyme A carboxylase 626082-627140 + 352 38233258 - DIP0651 - - hypothetical protein 633347-634978 - 543 38233265 pccB1 DIP0658 - COG4799I Propionyl CoA carboxylase beta chain 1 686052-686312 - 86 38233319 - DIP0712 - - Putative transcriptional regulator 716559-718115 + 518 38233346 mmdA DIP0740 - COG4799I methylmalonyl-CoA decarboxylase, alpha-subunit 718417-718785 + 122 38233348 - DIP0742 - COG0511I Putative decarboxylase 754956-755579 - 207 38233374 - DIP0775 - - hypothetical protein 765541-766848 + 435 38233384 gltA DIP0785 - COG0372C citrate synthase 767015-767374 + 119 38233385 - DIP0786 - COG0545O Putative FK506-binding protein 796859-797116 - 85 38233420 - DIP0823 - COG0695O hypothetical protein 825815-826120 - 101 38233446 rpsN DIP0849 - COG0199J 30S ribosomal protein S14 826124-826288 - 54 38233447 rpmG DIP0850 - COG0267J 50S ribosomal protein L33 826998-827264 + 88 38233449 rpmE DIP0852 - COG0254J 50S ribosomal protein L31 827283-827456 + 57 38233450 rpmF DIP0853 - - 50S ribosomal protein L32 832222-832626 - 134 38233456 mscL DIP0859 - - large-conductance mechanosensitive channel 870759-871376 - 205 38233497 - DIP0901 - COG1825J 50S ribosomal protein L25 873535-874515 - 326 38233499 prsA DIP0903 - COG0462FE ribose-phosphate pyrophosphokinase 891487-892764 + 425 38233513 eno DIP0917 - COG0148G phosphopyruvate hydratase 898245-898766 - 173 38233521 greA DIP0925 - COG0782K transcription elongation factor GreA 903498-904787 + 429 38233528 glyA DIP0932 - COG0112E serine hydroxymethyltransferase 908959-910362 - 467 38233534 fumC DIP0938 - COG0114C fumarate hydratase 910620-911636 - 338 38233535 - DIP0939 - - hypothetical protein 927733-929322 + 529 38233552 - DIP0956 - COG4166E Putative peptide transport system secreted protein 939899-941809 + 636 38233564 - DIP0969 - COG1217T Putative GTP-binding elongation factor 970254-973985 - 1243 38233597 kgd DIP1002 - COG0508C,COG0567C alpha-ketoglutarate decarboxylase 993506-995548 + 680 38233613 deaD DIP1018 - COG0513LKJ DEAD-box helicase 1006815-1007345 - 176 38233622 - DIP1027 - - hypothetical protein 1008712-1009341 - 209 38233625 - DIP1030 - COG1556S hypothetical protein 1009343-1010860 - 505 38233626 - DIP1031 - COG1139C Putative iron-sulfur protein 1029073-1029312 + 79 38233641 atpE DIP1047 - COG0636C ATP synthase subunit C 1029340-1029906 + 188 38233642 atpF DIP1048 - COG0711C ATP synthase subunit B 1030794-1032422 + 542 38233644 atpA DIP1050 - COG0056C ATP synthase subunit A 1033457-1034902 + 481 38233646 atpD DIP1052 - COG0055C ATP synthase subunit B 1034916-1035287 + 123 38233647 atpC DIP1053 - - ATP synthase subunit epsilon 1037086-1037544 - 152 38233651 - DIP1057 - COG0346E Putative methylmalonyl-CoA epimerase 1133555-1135015 + 486 38233738 rpsA DIP1148 - COG0539J 30S ribosomal protein S1 1152916-1153110 + 64 38233751 rpmI DIP1161 - COG0291J 50S ribosomal protein L35 1153172-1153555 + 127 38233752 rplT DIP1162 - - 50S ribosomal protein L20 1341260-1341583 - 107 38233915 mihF DIP1329 - - integration host factor 1438479-1439075 - 198 38234005 dirA DIP1420 - COG0450O iron repressible polypeptide (putative reductase) 1454634-1454900 + 88 38234016 - DIP1435 - COG1925G Putative carbohydrate carrier protein (PTS system) 1488766-1489035 - 89 38234049 rpsO DIP1468 - - 30S ribosomal protein S15 1530890-1531717 - 275 38234086 tsf DIP1507 - - elongation factor Ts 1531998-1532798 - 266 38234087 rpsB DIP1508 - - 30S ribosomal protein S2 1548534-1548875 - 113 38234104 rplS DIP1527 - - 50S ribosomal protein L19 1553211-1553684 - 157 38234109 rpsP DIP1532 - - 30S ribosomal protein S16 1673085-1675034 + 649 38234214 pdhC DIP1639 - COG0508C dihydrolipoamide acetyltransferase 1678597-1680033 + 478 38234219 glnA1 DIP1644 - - glutamine synthetase I 1723276-1726011 + 911 38234258 aceE DIP1687 - COG2609C pyruvate dehydrogenase subunit E1 1745608-1746993 - 461 38234279 glyS DIP1708 - COG0423J glycyl-tRNA synthetase 1809198-1811045 - 615 38234335 lepA DIP1764 - COG0481M GTP-binding protein LepA 1812042-1812305 + 87 38234337 rpsT DIP1766 - COG0268J 30S ribosomal protein S20 1818283-1818750 - 155 38234345 - DIP1774 - - hypothetical protein 1823886-1824152 - 88 38234351 rpmA DIP1780 - - 50S ribosomal protein L27 1824193-1824498 - 101 38234352 rplU DIP1781 - - 50S ribosomal protein L21 1827843-1828277 - 144 38234354 ndk DIP1783 - - nucleoside diphosphate kinase 1833151-1834131 - 326 38234358 mdh DIP1787 - COG0039C malate dehydrogenase 1840874-1842220 - 448 38234364 tig DIP1793 - COG0544O trigger factor 1851027-1852697 - 556 38234374 - DIP1803 - COG0488R Putative ABC transport system, ATP binding protein 1855730-1858015 + 761 38234377 cstA1 DIP1806 - COG1966T carbon starvation protein 1882473-1882748 - 91 38234412 - DIP1842 - - hypothetical protein 1895536-1896261 - 241 38234421 rph DIP1851 - COG0689J ribonuclease PH 1910803-1911288 + 161 38234436 - DIP1866 - COG1528P Putative bacterioferritin 1940558-1941493 + 311 38234460 - DIP1890 - COG0031E Putative cysteine synthase 1956426-1957979 - 517 38234472 cat1 DIP1902 - COG0427C succinyl-CoA:Coenzyme A transferase 1970918-1971982 - 354 38234486 purM DIP1919 - COG0150F phosphoribosylaminoimidazole synthetase 2017931-2018872 - 313 38234534 - DIP1970 - COG0566J SpoU rRNA Methylase family protein 2021529-2022110 - 193 38234538 - DIP1974 - - Putative CarD-like transcriptional factor 2030233-2032884 - 883 38234547 clpC DIP1983 - COG0542O ATP-dependent Clp protease ATP-binding subunit 2035873-2037435 - 520 38234551 lysS DIP1987 - COG1190J lysyl-tRNA synthetase 2054407-2054883 + 158 38234570 ppa DIP2006 - COG0221C inorganic pyrophosphatase 2073868-2075508 - 546 38234584 groEL DIP2020 - COG0459O chaperonin GroEL 2087440-2088801 + 453 38234595 - DIP2037 - COG0624E hypothetical protein 2107606-2108106 + 166 38234615 - DIP2058 - COG2236R Putative purine phosphoribosyltransferase 2113380-2114669 - 429 38234620 purA DIP2063 - - adenylosuccinate synthetase 2121346-2122479 + 377 38234626 - DIP2069 - - Putative secreted protein 2144833-2145867 - 344 38234643 fba DIP2094 - COG0191G fructose-bisphosphate aldolase 2163769-2164809 - 346 38234663 adhA DIP2114 - COG1064R alcohol dehydrogenase 2170794-2172629 - 611 38234669 dnaK DIP2120 - COG0443O molecular chaperone DnaK 2190630-2194346 + 1238 38234679 - DIP2130 - COG0046F,COG0047F Putative phosphoribosylformylglycinamidine synthase 2256423-2258261 - 612 38234723 pckG DIP2180 - COG1274C phosphoenolpyruvate carboxykinase (GTP) 2258718-2259497 + 259 38234724 trmB DIP2181 - COG0220R tRNA (guanine-N(7)-)-methyltransferase 2329968-2331227 - 419 38234776 serS DIP2240 - COG0172J seryl-tRNA synthetase 2345667-2346533 - 288 38234789 - DIP2253 - - hypothetical protein 2347413-2348369 - 318 38234791 ldh DIP2255 - COG0039C L-lactate dehydrogenase 2353492-2354091 + 199 38234797 sodA DIP2261 - COG0605P manganese superoxide dismutase 2361757-2363166 + 469 38234806 uhpT DIP2270 - COG2271G hexose phosphate transport protein 2366976-2367878 - 300 38234812 - DIP2276 - COG0589T Conserved hypothetical protein (universal stress protein family) 2386879-2387331 - 150 38234824 rplI DIP2289 - COG0359J 50S ribosomal protein L9 2388168-2388464 - 98 38234826 rpsF DIP2291 - COG0360J 30S ribosomal protein S6 2399360-2399845 - 161 38234838 - DIP2303 - COG0783P Putative DNA protection during starvation protein 2436460-2437851 + 463 38234865 - DIP2331 - COG1012C Putative aldehyde dehydrogenase