Lactobacillus acidophilus NCFM, complete genome - 1..1993561 Location Strand Length PID Gene Synonym Code COG Product 8933-9229 + 98 58336361 rpsF LBA0007 - COG0360J 30S ribosomal protein S6 9822-10058 + 78 58336363 rpsR LBA0009 - - 30S ribosomal protein S18 12271-12726 + 151 58336365 rplI LBA0012 - COG0359J 50S ribosomal protein L9 50079-51128 - 349 58336405 ldhD LBA0055 - COG1052CHR D-lactate dehydrogenase 101104-101244 + 46 58336449 - LBA0102 - - hypothetical protein 124218-125204 + 328 58336478 - LBA0131 - COG0462FE ribose-p pyrokinase 140422-140901 - 159 58336492 - LBA0145 - COG3613F 2-deoxyribosyltransferase 143306-144235 + 309 58336498 - LBA0151 - COG3221P alkylphosphonate ABC transporter 147414-147899 + 161 58336503 - LBA0156 - - hypothetical protein 151439-152707 + 422 58336506 - LBA0159 - COG0458EF,COG3919R hypothetical protein 159007-160959 + 650 58336512 pepO LBA0165 - COG3590O neutral endopeptidase 163671-164081 - 136 58336514 - LBA0167 - - hypothetical protein 165277-166611 + 444 58336516 slpA LBA0169 - - S-layer 169584-170957 - 457 58336520 slpB LBA0175 - - S-layer 178485-179177 + 230 58336527 - LBA0185 - COG0588G phosphoglyceromutase 187222-188484 + 420 58336534 - LBA0192 - COG0162J tyr-tRNA synthetase 191288-192913 + 541 58336538 oppA LBA0197 - COG4166E oligopeptide binding protein 217766-218614 + 282 58336563 - LBA0222 - - hypothetical protein 220709-221683 + 324 58336565 prsA LBA0224 - COG0462FE ribose-p-pyrophosphokinase 228791-229345 + 184 58336573 - LBA0232 - COG3343K DNA-directed RNA polymerase subunit delta 229463-231082 + 539 58336574 - LBA0233 - COG0504F CTP synthetase 256048-256293 + 81 58336604 - LBA0265 - COG0254J ribosomal protein 261799-262770 - 323 58336610 - LBA0271 - COG0039C L-LDH 273663-275213 + 516 58336620 lysS LBA0281 - COG1190J lysyl-tRNA synthetase 279065-282706 + 1213 58336623 - LBA0284 - COG0085K DNA-directed RNA polymerase beta subunit 282722-286375 + 1217 58336624 - LBA0285 - COG0086K DNA-directed RNA polymerase beta' subunit 287288-287695 + 135 58336626 - LBA0287 - - 30S ribosomal protein S12 287711-288181 + 156 58336627 - LBA0288 - COG0049J 30S ribosomal protein S7 288215-290308 + 697 58336628 - LBA0289 - COG0480J elongation factor EF-2 290628-290936 + 102 58336629 - LBA0290 - COG0051J 30S ribosomal protein S10 291613-292230 + 205 58336631 - LBA0292 - - 50S ribosomal protein L4 292548-293384 + 278 58336633 - LBA0294 - COG0090J 50S ribosomal protein L2 294074-294748 + 224 58336636 rpsC LBA0297 - COG0092J 30S ribosomal protein S3 295394-295660 + 88 58336639 - LBA0300 - COG0186J 30S ribosomal protein S17 296328-296870 + 180 58336642 - LBA0303 - COG0094J 50S ribosomal protein L5 297517-298047 + 176 58336644 - LBA0305 - COG0097J 50S ribosomal protein L6 299181-299621 + 146 58336648 - LBA0309 - COG0200J 50S ribosomal protein L15 301894-302010 + 38 58336652 - LBA0314 - COG0257J 50S ribosomal protein L36 302035-302385 + 116 58336653 - LBA0315 - COG0099J 30S ribosomal protein S13 303811-304194 + 127 58336656 - LBA0318 - COG0203J 50S ribosomal protein L17 307756-308199 + 147 58336661 - LBA0323 - - 50S ribosomal protein L13 308211-308606 + 131 58336662 - LBA0324 - - 30S ribosomal protein S9 324213-325562 - 449 58336681 - LBA0343 - COG3579E aminopeptidase C 328066-329565 + 499 58336685 gltX LBA0347 - COG0008J glutamyl-tRNA synthetase 333046-333264 + 72 58336690 - LBA0352 - - hypothetical protein 338867-339424 + 185 58336696 nusG LBA0358 - COG0250K transcriptional antiterminator 339551-339976 + 141 58336697 - LBA0359 - - 50S ribosomal protein L11 340056-340748 + 230 58336698 - LBA0360 - - 50S ribosomal protein L1 347907-348419 + 170 58336707 - LBA0369 - COG0244J 50S ribosomal protein L10 348469-348831 + 120 58336708 - LBA0370 - COG0222J 50S ribosomal protein L7-L12 354802-355137 + 111 58336715 - LBA0378 - - hypothetical protein 366636-367973 - 445 58336732 - LBA0395 - COG1804C formyl-coenzyme A transferase 379398-379682 + 94 58336742 - LBA0405 - COG0234O cochaperonin 379705-381333 + 542 58336743 - LBA0406 - COG0459O chaperonin 387650-388060 + 136 58336749 - LBA0412 - COG1862U protein translocase 390795-391751 + 318 58336752 - LBA0415 - COG0618R hypothetical protein 393347-395986 + 879 58336754 - LBA0417 - COG0013J ala-tRNA synthetase 399539-399850 + 103 58336759 - LBA0422 - COG0526OC thioredoxin reductase 403737-404105 + 122 58336766 - LBA0429 - - hypothetical protein 440521-441330 + 269 58336788 manM LBA0455 - - mannose-specific PTS system component IIC 441359-442282 + 307 58336789 manN LBA0456 - - mannose-specific PTS system component IID 453492-455150 - 552 58336799 - LBA0466 - COG1866C hypothetical protein 479955-480071 - 38 58336821 - LBA0490 - - hypothetical protein 482878-483573 + 231 58336824 - LBA0493 - - aggregation promoting protein 521114-522553 + 479 58336859 gatA LBA0532 - - Glu-tRNAGln amidotransferase subunit A 522558-523988 + 476 58336860 gatB LBA0533 - COG0064J aspartyl/glutamyl-tRNA amidotransferase subunit B 585252-587651 + 799 58336925 - LBA0600 - COG3957G putative phosphoketolase 609383-610210 + 275 58336948 ampM LBA0623 - COG0024J methionine aminopeptidase 626544-626810 + 88 58336964 ptsH LBA0639 - COG1925G phosphocarrier protein HPr 626810-628543 + 577 58336965 ptsI LBA0640 - COG1080G p-enolpyruvate-protein p-transferase PTSI 692948-693964 + 338 58337019 - LBA0698 - COG0057G glyceraldehyde-3-p dehydrogenase 694078-695289 + 403 58337020 - LBA0699 - - phosphoglycerate kinase 695315-696073 + 252 58337021 - LBA0700 - COG0149G triosephosphate isomerase 707353-708711 + 452 58337035 - LBA0716 - COG1109G phosphoglucomutase (glycolysis) 721708-722436 + 242 58337048 - LBA0733 - - hypothetical protein 739022-740359 + 445 58337066 - LBA0752 - COG0166G glucose-6-phosphate isomerase 769129-769740 - 203 58337098 - LBA0786 - COG0522J 30S ribosomal protein S4 776256-778895 + 879 58337105 - LBA0794 - COG0525J valyl-tRNA synthetase 798407-801190 + 927 58337125 - LBA0817 - COG0060J isoleucyl-tRNA synthetase 814206-816050 + 614 58337139 bipA LBA0831 - COG1217T GTP-binding protein -BipA-EF-TU family 824243-824389 + 48 58337149 - LBA0842 - - putative 30S ribosomal protein S15 827438-828628 + 396 58337152 tuf LBA0845 - COG0050J elongation factor Tu 828774-830102 + 442 58337153 tig LBA0846 - COG0544O trigger factor 848905-849060 + 51 58337171 - LBA0866 - - putative dehydrogenase 855310-855645 + 111 58337181 - LBA0876 - COG1440G cellobiose-specific PTS IIC 861033-862460 - 475 58337189 - LBA0884 - COG1455G cellobiose-specific PTS IIC 866241-867527 - 428 58337194 eno LBA0889 - COG0148G phosphopyruvate hydratase 910169-912013 + 614 58337236 - LBA0936 - COG0173J aspartyl-tRNA synthetase 927150-927338 + 62 58337250 - LBA0952 - COG0333J 50S Ribosomal protein L32 933614-935383 + 589 58337255 kpyK LBA0957 - - pyruvate kinase 941963-943174 + 403 58337265 - LBA0968 - COG0539J 30S Ribosomal protein S1 944731-945006 + 91 58337267 - LBA0970 - - DNA-binding protein II HB 972197-973459 + 420 58337293 - LBA0997 - COG4100P aluminum resistance protein 1080285-1081073 + 262 58337388 - LBA1098 - COG1028IQR glucose-1-dehydrogenase 1103207-1104142 + 311 58337415 - LBA1125 - COG1227C putative manganese-dependent inorganic pyrophosphatase 1139255-1140499 - 414 58337447 - LBA1162 - COG0017J asparaginyl-tRNA synthetase 1176063-1176980 - 305 58337481 glyQ LBA1199 - - glycyl-tRNA synthetase alpha subunit 1224952-1226796 - 614 58337526 dnaK LBA1247 - COG0443O molecular chaperone DnaK 1247958-1248983 - 341 58337546 tsf LBA1269 - - elongation factor Ts 1249023-1249799 - 258 58337547 - LBA1270 - - 30S ribosomal protein S2 1258962-1259222 - 86 58337555 - LBA1279 - - hypothetical protein 1265101-1265448 - 115 58337562 - LBA1286 - - 50S ribosomal protein L19 1266887-1267159 - 90 58337565 - LBA1289 - - 30S ribosomal protein S16 1271181-1272602 - 473 58337570 - LBA1294 - - dipeptidase 1279789-1281546 - 585 58337576 oppA LBA1300 - COG0747E oligopeptide ABC trasporter substrate binding protein 1287773-1288015 - 80 58337582 - LBA1307 - COG0236IQ carrier protein ACP 1293323-1293508 + 61 58337587 rpmB LBA1312 - COG0227J 50s ribosomal protein RL28 1312036-1312605 - 189 58337608 - LBA1335 - COG0231J elongation factor P 1313920-1314210 - 96 58337610 rpmA LBA1337 - - 50S ribosomal protein L27 1314229-1314540 - 103 58337611 rplU LBA1338 - - 50s ribosomal protein RL21 1491499-1492836 - 445 58337766 glnA LBA1501 - - glutamine synthetase 1502339-1503262 + 307 58337776 - LBA1511 - COG2971G predicted N-acetylglucosamine kinase 1511768-1512244 - 158 58337782 greA LBA1517 - COG0782K transcriptional elongation factor 1512320-1514734 - 804 58337783 pheS LBA1518 - COG0072J,COG0073R phenylalanyl-tRNA synthetase, beta subunit 1528756-1529112 - 118 58337801 rplT LBA1536 - - 50S ribosomal protein L20 1529154-1529354 - 66 58337802 rpmI LBA1537 - COG0291J 50S ribosomal protein L35 1531791-1533725 - 644 58337807 thrS LBA1543 - COG0441J theronyl-tRNA synthetase 1575172-1575819 - 215 58337843 pheT LBA1580 - COG0073R phenylalanyl-tRNA synthetase (beta subunit) 1579822-1580724 + 300 58337850 prsA LBA1588 - COG0760O peptidylprolyl isomerase 1585463-1585813 - 116 58337854 - LBA1592 - COG3679S hypothetical protein 1591739-1592650 - 303 58337860 fbaA LBA1599 - COG0191G fructose-bisphosphate aldolase 1592759-1594444 - 561 58337861 argS LBA1600 - COG0018J arginyl-tRNA synthetase 1603631-1604044 - 137 58337871 - LBA1610 - COG1917S hypothetical protein 1618588-1621002 - 804 58337877 leuS LBA1617 - COG0495J leucyl-tRNA synthetase 1634901-1636208 - 435 58337885 - LBA1626 - COG0172J seryl-tRNA synthetase 1660865-1662166 - 433 58337899 - LBA1641 - COG1653G glycerol-3-phosphate ABC transporter 1690350-1690925 - 191 58337926 - LBA1668 - COG0231J elongation factor 1714692-1714811 - 39 58337951 - LBA1693 - - hypothetical protein 1715174-1715302 - 42 58337952 - LBA1694 - - hypothetical protein 1780997-1781551 - 184 58338001 - LBA1744 - COG0791M putative glycosidase 1798727-1799092 + 121 58338023 - LBA1769 - COG3576R hypothetical protein 1803212-1805209 - 665 58338030 fruA LBA1777 - COG1299G,COG1762GT PTS system, fructose-specific enzyme II 1862892-1863254 + 120 58338098 lysM LBA1850 - - putative aggregation promoting protein 1874742-1875968 - 408 58338112 - LBA1866 - COG2182G maltose ABC transporter permease protein 1902007-1903296 - 429 58338136 purA LBA1892 - - adenylosuccinate synthase 1919089-1921218 - 709 58338154 clpE LBA1910 - COG0542O ATP-dependent protease 1934408-1934647 - 79 58338167 dltC LBA1924 - - D-alanine--poly(phosphoribitol) ligase subunit 2