Lactobacillus plantarum WCFS1, complete genome - 1..3308274 Location Strand Length PID Gene Synonym Code COG Product 9860-10159 + 99 28376981 rpsF lp_0009 - COG0360J ribosomal protein S6 10837-11073 + 78 28376983 rpsR lp_0011 - - 30S ribosomal protein S18 13279-13731 + 150 28376985 rplI lp_0013 - COG0359J ribosomal protein L9 36680-36880 + 66 28377002 cspL lp_0031 - - cold shock protein CspL 89314-89547 - 77 28377052 - lp_0099 - - hypothetical protein 151222-152475 + 417 28377115 malE lp_0175 - COG2182G maltose/maltodextrin ABC transporter, substrate binding protein 206280-206993 + 237 28377158 gnp lp_0226 - COG0363G glucosamine-6-phosphate isomerase 213329-214486 + 385 28377163 mtlD lp_0233 - - mannitol-1-phosphate 5-dehydrogenase 220124-220672 + 182 28377171 - lp_0244 - COG0431R oxidoreductase (putative) 232292-233083 - 263 28377183 pepM lp_0257 - COG0024J methionyl aminopeptidase 278235-279038 - 267 28377225 - lp_0302 - - extracellular protein 280089-280727 - 212 28377226 - lp_0304 - - extracellular protein 301990-302853 + 287 28377250 fba lp_0330 - COG0191G fructose-bisphosphate aldolase 420927-421907 + 326 28377367 prs1 lp_0471 - COG0462FE ribose-phosphate pyrophosphokinase 428432-429031 + 199 28377374 rpoE lp_0480 - COG3343K DNA-directed RNA polymerase subunit delta 458582-458827 + 81 28377400 rpmE lp_0512 - COG0254J ribosomal protein L31 485467-486429 - 320 28377422 ldhL1 lp_0537 - COG0039C L-lactate dehydrogenase 496382-498619 + 745 28377431 ftsH lp_0547 - COG0465O cell division protein FtsH, ATP-dependent zinc metallopeptidase 517651-518787 + 378 28377444 nagA lp_0562 - COG1820G N-acetylglucosamine-6-phosphate deacetylase 533143-534117 + 324 28377456 pts9AB lp_0575 - COG2893G mannose PTS, EIIAB 534155-534961 + 268 28377457 pts9C lp_0576 - - mannose PTS, EIIC 534979-535896 + 305 28377458 pts9D lp_0577 - - mannose PTS, EIID 572690-574021 - 443 28377479 pepC1 lp_0601 - COG3579E cysteine aminopeptidase 579545-581035 + 496 28377485 gltX lp_0609 - COG0008J glutamyl-tRNA synthetase 587629-588054 + 141 28377495 rplK lp_0619 - - ribosomal protein L11 588155-588844 + 229 28377496 rplA lp_0620 - - 50S ribosomal protein L1 589043-589546 + 167 28377497 rplJ lp_0621 - COG0244J ribosomal protein L10 589608-589976 + 122 28377498 rplL lp_0622 - COG0222J ribosomal protein L12/L7 637543-638553 - 336 28377561 nrdF lp_0692 - COG0208F ribonucleotide-diphosphate reductase beta subunit 640885-641115 - 76 28377563 nrdH lp_0694 - COG0695O glutaredoxin-like protein NrdH 656135-657187 - 350 28377582 phnD lp_0715 - COG3221P phosphonates ABC transporter, substrate binding protein (putative) 665004-665288 + 94 28377590 groES lp_0727 - COG0234O GroES co-chaperonin 665344-666969 + 541 28377591 groEL lp_0728 - COG0459O GroEL chaperonin 674619-675185 + 188 28377598 - lp_0737 - COG1544J ribosomal protein S30EA 691787-692707 + 306 28377616 galU lp_0757 - COG1210M UTP--glucose-1-phosphate uridylyltransferase 710128-710604 + 158 28377630 luxS lp_0774 - - S-ribosylhomocysteinase 720764-721354 - 196 28377639 clpP lp_0786 - COG0740OU ATP-dependent Clp protease proteolytic subunit 724979-726001 + 340 28377642 gapB lp_0789 - COG0057G glyceraldehyde 3-phosphate dehydrogenase 726122-727324 + 400 28377643 pgk lp_0790 - - phosphoglycerate kinase 727351-728109 + 252 28377644 tpiA lp_0791 - COG0149G triosephosphate isomerase 728191-729519 + 442 28377645 enoA1 lp_0792 - COG0148G phosphopyruvate hydratase 787619-789358 + 579 28377692 pox1 lp_0849 - COG0028EH pyruvate oxidase 860617-861039 + 140 28377757 asp1 lp_0929 - - alkaline shock protein 888834-889802 - 322 28377779 asnA lp_0957 - COG2502E asparagine synthetase AsnA 921009-921209 + 66 28377809 cspC lp_0997 - - cold shock protein CspC 933125-934402 + 425 28377821 serS2 lp_1012 - COG0172J seryl-tRNA synthetase 939961-943575 + 1204 28377825 rpoB lp_1021 - COG0085K DNA-directed RNA polymerase beta subunit 943593-947234 + 1213 28377826 rpoC lp_1022 - COG0086K DNA-directed RNA polymerase beta' subunit 948830-949243 + 137 28377828 rpsL lp_1025 - - 30S ribosomal protein S12 949260-949730 + 156 28377829 rpsG lp_1026 - COG0049J 30S ribosomal protein S7 949872-951968 + 698 28377830 fusA2 lp_1027 - COG0480J elongation factor EF-2 952919-953227 + 102 28377831 rpsJ lp_1032 - COG0051J ribosomal protein S10 953265-953894 + 209 28377832 rplC lp_1033 - - ribosomal protein L3 953913-954536 + 207 28377833 rplD lp_1034 - - 50S ribosomal protein L4 954536-954829 + 97 28377834 rplW lp_1035 - COG0089J ribosomal protein L23 954853-955692 + 279 28377835 rplB lp_1036 - COG0090J 50S ribosomal protein L2 955735-956010 + 91 28377836 rpsS lp_1038 - COG0185J ribosomal protein S19 956031-956378 + 115 28377837 rplV lp_1039 - - ribosomal protein L22 956391-957044 + 217 28377838 rpsC lp_1040 - COG0092J 30S ribosomal protein S3 957047-957481 + 144 28377839 rplP lp_1041 - COG0197J 50S ribosomal protein L16 957471-957665 + 64 28377840 rpmC lp_1043 - - 50S ribosomal protein L29 957688-957957 + 89 28377841 rpsQ lp_1044 - COG0186J 30S ribosomal protein S17 958000-958368 + 122 28377842 rplN lp_1045 - - ribosomal protein L14 958402-958713 + 103 28377843 rplX lp_1046 - COG0198J ribosomal protein L24 958742-959284 + 180 28377844 rplE lp_1047 - COG0094J ribosomal protein L5 959305-959490 + 61 28377845 rpsN lp_1048 - COG0199J ribosomal protein S14 959524-959919 + 131 28377846 rpsH lp_1050 - - ribosomal protein S8 959949-960485 + 178 28377847 rplF lp_1051 - COG0097J 50S ribosomal protein L6 960520-960885 + 121 28377848 rplR lp_1052 - COG0256J ribosomal protein L18 960906-961406 + 166 28377849 rpsE lp_1053 - COG0098J ribosomal protein S5 961421-961603 + 60 28377850 rpmD lp_1054 - COG1841J ribosomal protein L30 961635-962066 + 143 28377851 rplO lp_1055 - COG0200J ribosomal protein L15 963427-964077 + 216 28377853 adk lp_1058 - COG0563F adenylate kinase 964252-964470 + 72 28377854 infA lp_1059 - COG0361J translation initiation factor IF-1 964654-965019 + 121 28377856 rpsM lp_1060 - COG0099J 30S ribosomal protein S13 965044-965433 + 129 28377857 rpsK lp_1061 - COG0100J 30S ribosomal protein S11 965520-966464 + 314 28377858 rpoA lp_1062 - COG0202K DNA-directed RNA polymerase alpha subunit 966486-966869 + 127 28377859 rplQ lp_1063 - COG0203J ribosomal protein L17 973064-973990 + 308 28377865 - lp_1070 - COG4939S lipoprotein precursor 978985-979428 + 147 28377871 rplM lp_1077 - - 50S ribosomal protein L13 979442-979834 + 130 28377872 rpsI lp_1078 - - ribosomal protein S9 1015132-1016775 + 547 28377905 mleS lp_1118 - COG0281C malolactic enzyme 1045876-1047300 + 474 28377927 gatB lp_1149 - COG0064J aspartyl/glutamyl-tRNA amidotransferase subunit B 1058875-1059075 + 66 28377937 cspP lp_1160 - - cold shock protein CspP 1085724-1086272 + 182 28377962 rfbC lp_1188 - COG1898M dTDP-4-dehydrorhamnose 3,5-epimerase 1086316-1087344 + 342 28377963 rfbB lp_1189 - COG1088M dTDP-glucose 4,6-dehydratase 1124674-1124886 - 70 28378005 - lp_1236 - - hypothetical protein 1146477-1148120 + 547 28378027 oppA lp_1261 - COG4166E oligopeptide ABC transporter, substrate binding protein 1157150-1157416 + 88 28378035 hpr lp_1273 - COG1925G phosphocarrier protein Hpr 1157416-1159146 + 576 28378036 ptsI lp_1274 - COG1080G phosphoenolpyruvate--protein phosphatase 1210182-1212608 + 808 28378066 leuS lp_1316 - COG0495J leucyl-tRNA synthetase 1271336-1271581 + 81 28378121 - lp_1388 - - hypothetical protein 1295072-1295416 + 114 28378143 - lp_1415 - COG3679S hypothetical protein 1329379-1330275 - 298 28378171 prsA lp_1452 - COG0760O peptidylprolyl isomerase 1385839-1387803 + 654 28378228 thrS lp_1514 - COG0441J threonine--tRNA ligase 1 1388568-1388762 + 64 28378230 rpmI lp_1516 - COG0291J ribosomal protein L35 1388799-1389155 + 118 28378231 rplT lp_1517 - - 50S ribosomal protein L20 1407210-1408646 + 478 28378252 gnd2 lp_1541 - COG0362G 6-phosphogluconate dehydrogenase 1428800-1429282 + 160 28378269 greA2 lp_1563 - COG0782K transcription elongation factor GreA 1438505-1439467 + 320 28378278 glk lp_1573 - COG1940KG glucokinase 1441064-1441240 - 58 28378281 - lp_1577 - - hypothetical protein 1443550-1444896 + 448 28378285 glnA lp_1581 - - glutamate--ammonia ligase 1450655-1450963 + 102 28378293 rplU lp_1592 - - ribosomal protein L21 1451345-1451623 + 92 28378295 rpmA lp_1594 - - 50S ribosomal protein L27 1452950-1453507 + 185 28378297 efp lp_1596 - COG0231J elongation factor P 1466199-1466411 + 70 28378313 rpoZ lp_1613 - COG1758K DNA-directed RNA polymerase, omega subunit 1478004-1478189 - 61 28378323 rpmB lp_1624 - COG0227J ribosomal protein L28 1483839-1484084 + 81 28378328 acpA1 lp_1629 - COG0236IQ acyl carrier protein 1492439-1492711 + 90 28378334 rpsP lp_1636 - - ribosomal protein S16 1494569-1494925 + 118 28378338 rplS lp_1640 - - 50S ribosomal protein L19 1524296-1524544 + 82 28378362 acpA2 lp_1672 - COG0236IQ acyl carrier protein 1579487-1580785 + 432 28378421 asnS2 lp_1740 - COG0017J asparagine--tRNA ligase 1656719-1656919 + 66 28378495 - lp_1834 - - hypothetical protein 1658188-1659117 - 309 28378498 - lp_1837 - COG1227C putative manganese-dependent inorganic pyrophosphatase 1697626-1697901 - 91 28378532 hbsU lp_1879 - - DNA-binding protein II 1699597-1700886 - 429 28378535 rpsA lp_1882 - COG0539J ribosomal protein S1 1711809-1713569 - 586 28378548 pyk lp_1897 - - pyruvate kinase 1713655-1714617 - 320 28378549 pfkA lp_1898 - COG0205G 6-phosphofructokinase 1785273-1785461 - 62 28378615 rpsU lp_1973 - COG0828J ribosomal protein S21 1826580-1828448 - 622 28378660 dnaK lp_2027 - COG0443O molecular chaperone DnaK 1857090-1857968 - 292 28378685 tsf lp_2054 - - elongation factor Ts 1858071-1858874 - 267 28378686 rpsB lp_2055 - - 30S ribosomal protein S2 1860110-1861108 - 332 28378688 ldhD lp_2057 - COG1052CHR D-lactate dehydrogenase 1889787-1891754 + 655 28378719 pts16ABC lp_2097 - COG1299G,COG1762GT fructose PTS, EIIABC 1911390-1912712 - 440 28378739 tig lp_2118 - COG0544O trigger factor 1912916-1914103 - 395 28378740 tuf lp_2119 - COG0050J elongation factor Tu 1919368-1919637 - 89 28378745 rpsO lp_2125 - - ribosomal protein S15 1919865-1920119 + 84 28378746 rpsT lp_2126 - COG0268J ribosomal protein S20 1938778-1940616 - 612 28378761 typA lp_2146 - COG1217T GTP-binding protein TypA 1944627-1945922 - 431 28378765 pdhC lp_2152 - COG0508C pyruvate dehydrogenase complex, E2 component; dihydrolipoamide S-acetyltransferase 1946959-1948071 - 370 28378767 pdhA lp_2154 - COG1071C pyruvate dehydrogenase complex, E1 component, alpha subunit 2037060-2037788 - 242 28378848 - lp_2253 - - hypothetical protein 2053175-2053471 - 98 28378867 - lp_2273 - COG3906S hypothetical protein 2061186-2061569 - 127 28378875 - lp_2281 - COG1862U preprotein translocase, subunit (putative) 2108055-2108663 + 202 28378911 rpsD lp_2331 - COG0522J 30S ribosomal protein S4 2115699-2116181 + 160 28378919 - lp_2340 - COG0589T hypothetical protein 2134716-2136119 - 467 28378938 atpD lp_2364 - COG0055C ATP synthase subunit B 2137118-2138632 - 504 28378940 atpA lp_2366 - COG0056C ATP synthase subunit A 2139759-2139971 - 70 28378943 atpE lp_2369 - COG0636C H(+)-transporting two-sector ATPase, C subunit 2143433-2144062 - 209 28378946 upp lp_2374 - COG0035F uracil phosphoribosyltransferase 2218833-2219066 + 77 28379039 - lp_2482 - - hypothetical protein 2222028-2224781 - 917 28379043 - lp_2486 - - cell surface protein precursor, GY family 2224956-2225087 - 43 28379044 - lp_2488 - - hypothetical protein 2233585-2234937 - 450 28379049 pgi lp_2502 - COG0166G glucose-6-phosphate isomerase 2344959-2345279 - 106 28379150 trxH lp_2633 - COG0526OC thioredoxin H-type 2362936-2365302 - 788 28379168 xpk1 lp_2659 - COG3957G putative phosphoketolase 2372049-2372390 - 113 28379178 - lp_2669 - - hypothetical protein 2472129-2472476 - 115 28379265 pts20A lp_2780 - - cellobiose PTS, EIIA 2472577-2472894 - 105 28379266 pts20B lp_2781 - COG1440G cellobiose PTS, EIIB 2658778-2658996 - 72 28379421 - lp_2987 - - hypothetical protein 2682080-2682694 + 204 28379442 - lp_3014 - COG1388M extracellular protein 2825555-2825719 - 54 28379557 - lp_3165 - - transposase, fragment 2827652-2828344 - 230 28379560 pmg9 lp_3170 - COG0588G phosphoglyceromutase 2832356-2833549 + 397 28379564 cfa2 lp_3174 - COG2230M cyclopropane-fatty-acyl-phospholipid synthase 2854090-2855373 - 427 28379587 nupC lp_3204 - - nucleoside transport protein 2949059-2951317 + 752 28379671 pflB2 lp_3313 - COG1882C formate C-acetyltransferase 3017894-3018754 - 286 28379735 - lp_3403 - COG0656R oxidoreductase 3031702-3032205 - 167 28379748 - lp_3416 - COG1846K transcription regulator (putative) 3037010-3038122 - 370 28379752 - lp_3421 - COG0791M,COG1388M extracellular protein, gamma-D-glutamate-meso-diaminopimelate muropeptidase (putative) 3051810-3052034 - 74 28379768 - lp_3442 - COG2608P hypothetical protein 3056767-3058119 - 450 28379772 nox5 lp_3449 - COG0446R NADH oxidase 3115214-3116116 - 300 28379817 - lp_3501 - COG1082G hypothetical protein 3167027-3167323 - 98 28379858 pts35B lp_3547 - COG3414G galactitol PTS, EIIB 3169067-3171478 + 803 28379861 xpk2 lp_3551 - COG3957G putative phosphoketolase 3172679-3174103 - 474 28379864 araA lp_3554 - COG2160G L-arabinose isomerase 3209669-3210514 - 281 28379899 rhaD lp_3592 - COG0235G rhamnulose-1-phosphate aldolase 3210563-3211846 - 427 28379900 rhaA lp_3593 - - L-rhamnose isomerase 3279931-3280326 - 131 28379959 rbsD lp_3659 - COG1869G ribose transport protein, membrane-associated protein 3282611-3285214 - 867 28379962 adhE lp_3662 - COG1012C,COG1454C bifunctional protein: alcohol dehydrogenase; acetaldehyde dehydrogenase 3286816-3287352 + 178 28379965 pdc lp_3665 - - p-coumaric acid decarboxylase