Pseudoalteromonas haloplanktis TAC125 chromosome II, complete sequence - 0..635328 Location Strand Length PID Gene Synonym Code COG Product 35740-36240 + 166 77361952 - PSHAb0029 - COG0346E putative enzyme protein 67860-68585 + 241 77361982 - PSHAb0060 - - hypothetical protein 89904-90113 + 69 77362000 cspX PSHAb0078 - - Cold shock protein 94393-95094 + 233 77362004 deoD PSHAb0082 - COG0813F Purine nucleoside phosphorylase (Inosine phosphorylase) (PNP) 123441-123896 - 151 77362025 - PSHAb0104 - COG2259S putative membrane DoxD-like family protein 140003-140386 - 127 77362036 - PSHAb0115 - COG0346E putative enzyme protein 176632-177063 - 143 77362061 ndk PSHAb0142 - - nucleoside diphosphate kinase 225958-226500 + 180 77362103 - PSHAb0186 - COG2128S hypothetical protein 233628-235133 - 501 77362114 csgA PSHAb0197 - - putative secreted major subunit of curlin, may bind calcium 290846-291094 + 82 77362162 - PSHAb0247 - - hypothetical protein 310987-311556 + 189 77362178 ahpC PSHAb0265 - COG0450O Alkyl hydroperoxide reductase subunit C (Alkyl hydroperoxide reductase protein C22) (SCRP-23) (Sulfate starvation-induced protein 8)(SSI8) 329857-330321 - 154 77362196 bfr PSHAb0283 - COG2193P bacterioferritin (Cytochrome B-1) (Cytochrome B-557) 330336-330806 - 156 77362197 bfr PSHAb0284 - COG2193P bacterioferritin (Cytochrome B-1) (Cytochrome B-557) 362758-362820 - 20 77362225 - PSHAb0313 - - putative orphan protein 391677-394790 - 1037 77362252 - PSHAb0340 - - putative Outer membrane protein with a TonB box 395112-398318 - 1068 77362253 - PSHAb0341 - COG1629P,COG4771P putative outer membrane protein with a TonB box 415125-417041 + 638 77362268 dnaK PSHAb0357 - COG0443O Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) 447918-448127 - 69 77362295 cspX PSHAb0384 - - Cold shock protein 448317-448526 - 69 77362296 cspX PSHAb0386 - - Cold shock protein 448717-448923 - 68 77362297 cspX PSHAb0387 - - Cold shock protein 475595-476296 - 233 77362325 - PSHAb0416 - - putative periplasmic or outer membrane protein 503940-504071 - 43 77362351 - PSHAb0442 - - hypothetical protein 520113-520388 + 91 77362371 hupB PSHAb0462 - - DNA-binding protein HU-beta (NS1) (HU-1) 523204-524211 - 335 77362374 - PSHAb0465 - COG0473CE isocitrate dehydrogenase 543177-543692 - 171 77362390 - PSHAb0481 - - putative orphan lipoprotein 626490-628829 - 779 77362465 ppsA PSHAb0557 - COG0574G phosphoenolpyruvate synthase 11474-12643 - 389 77358992 fadA PSHAa0010 - COG0183I 3-ketoacyl-CoA thiolase 12648-14807 - 719 77358993 fadB PSHAa0011 - COG1024I,COG1250I 3-hydroxybutyryl-CoA epimerase 21700-21912 + 70 77358999 - PSHAa0017 - - calmodulin 45093-45785 + 230 77359020 - PSHAa0042 - COG1842KT hypothetical protein 67014-67466 - 150 77359043 - PSHAa0066 - - cytochrome c' 68256-71720 + 1154 77359045 - PSHAa0068 - - serine endoprotease 97340-97663 + 107 77359072 cyaY PSHAa0095 - - iron scavenging protein 157237-157842 + 201 77359117 rplD PSHAa0145 - - 50S ribosomal protein L4 157839-158141 + 100 77359118 rplW PSHAa0146 - COG0089J 50S ribosomal protein L23 158157-158981 + 274 77359119 rplB PSHAa0147 - COG0090J 50S ribosomal protein L2 174662-176068 - 468 77359138 glnA PSHAa0166 - - glutamine synthetase 176578-178401 + 607 77359139 typA PSHAa0167 - COG1217T GTP-binding protein 192148-193212 + 354 77359154 - PSHAa0183 - COG2885M hypothetical protein 193464-196106 + 880 77359155 acnB PSHAa0184 - COG1049C aconitate hydratase 2/ 2-methylisocitrate dehydratase 205294-206499 + 401 77359165 argD PSHAa0194 - COG4992E N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase 224907-225464 + 185 77359188 nusG PSHAa0217 - COG0250K transcription antitermination factor 226109-226813 + 234 77359190 rplA PSHAa0219 - - 50S ribosomal protein L1 227136-227630 + 164 77359191 rplJ PSHAa0220 - COG0244J 50S ribosomal protein L10 227705-228067 + 120 77359192 rplL PSHAa0221 - COG0222J 50S ribosomal subunit protein L7/L12 236833-237207 + 124 77359195 rpsL PSHAa0224 - - 30S ribosomal protein S12 239981-241165 + 394 77359198 tufA PSHAa0227 - COG0050J protein chain elongation factor 241543-243084 - 513 77359199 pck PSHAa0228 - COG1866C phosphoenolpyruvate carboxykinase 272763-274406 - 547 77359226 groL PSHAa0259 - COG0459O chaperonin 278350-278814 + 154 77359232 accB PSHAa0265 - COG0511I acetyl-CoA carboxylase biotin carboxyl carrier protein 285088-285351 + 87 77359238 hfq PSHAa0271 - COG1923R polyA-binding protein 289024-290337 + 437 77359242 purA PSHAa0275 - - adenylosuccinate synthetase 299916-300239 + 107 77359252 - PSHAa0285 - COG2863C cytochrome c4 320768-320887 + 39 77359274 - PSHAa0307 - - hypothetical protein 339326-340129 - 267 77359290 suhB PSHAa0323 - COG0483G inositol-1-monophosphatase 359309-359599 - 96 77359312 fis PSHAa0346 - COG2901KL DNA-binding protein 361834-363681 - 615 77359315 rpoD PSHAa0349 - COG0568K RNA polymerase sigma factor 366251-366466 - 71 77359318 rpsU PSHAa0352 - COG0828J 30S ribosomal subunit protein S21 385351-385839 + 162 77359335 secB PSHAa0369 - COG1952U export protein 404449-407115 + 888 77359357 aceE PSHAa0391 - COG2609C pyruvate dehydrogenase decarboxylase subunit 409248-410675 + 475 77359359 lpd PSHAa0393 - COG1249C dihydrolipoamide dehydrogenase 415431-416213 + 260 77359363 - PSHAa0397 - - hypothetical protein 492054-492620 + 188 77359439 efp PSHAa0474 - COG0231J elongation factor P (EF-P) 503857-504684 - 275 77359450 psd PSHAa0486 - COG0688I phosphatidylserine decarboxylase 519279-520049 + 256 77359463 - PSHAa0505 - - hypothetical protein 551650-551841 - 63 77359493 - PSHAa0536 - - hypothetical protein 593751-594896 + 381 77359529 - PSHAa0574 - COG1979C alcohol dehydrogenase with dehydroquinate synthase-like domain 622446-623510 + 354 77359550 fbaA PSHAa0596 - COG0191G fructose-bisphosphate aldolase 632446-632889 - 147 77359560 dksAA PSHAa0606 - COG1734T RNA polymerase factor 670581-672050 + 489 77359601 guaB PSHAa0648 - COG0517R,COG0516F inositol-5-monophosphate dehydrogenase 697043-698194 - 383 77359622 metK PSHAa0670 - COG0192H methionine adenosyltransferase 1 (AdoMet synthetase) 698498-700489 + 663 77359623 tktA PSHAa0671 - COG0021G transketolase 1 (TK 1) 720349-721392 + 347 77359646 recA PSHAa0694 - COG0468L RecA protein (Recombinase A) 723801-724979 - 392 77359648 - PSHAa0696 - - hypothetical protein 754950-755435 - 161 77359672 slyDA PSHAa0721 - COG1047O FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) 775455-777089 + 544 77359692 pyrG PSHAa0741 - COG0504F CTP synthetase 777199-778497 + 432 77359693 eno PSHAa0742 - COG0148G phosphopyruvate hydratase 792934-793662 - 242 77359709 - PSHAa0759 - COG0695O,COG0678O peroxiredoxin/glutaredoxin protein 817432-817833 - 133 77359735 fliS PSHAa0786 - COG1516NUO flagellar biosynthesis protein 867102-867707 + 201 77359788 ahpCB PSHAa0839 - COG0450O peroxiredoxin 2 (Thioredoxin peroxidase 1) (Thioredoxin-dependent peroxide reductase 1) (Thiol-specific antioxidant protein) (TSA) (PRP) 877231-878703 - 490 77359798 ilvC PSHAa0849 - COG0059EH ketol-acid reductoisomerase 894707-895003 - 98 77359817 yhbY PSHAa0868 - - RNA binding protein; ancient RNA-binding IF3-C fold 900841-901194 + 117 77359823 secG PSHAa0874 - COG1314U protein-export membrane protein secG(General Secretory Pathway) 943127-943387 - 86 77359862 rpsT PSHAa0914 - COG0268J 30S ribosomal subunit protein S20 974005-974253 + 82 77359890 rpsP PSHAa0944 - - 30S ribosomal subunit protein S16 975608-975967 + 119 77359893 rplS PSHAa0947 - - 50S ribosomal subunit protein L19 987231-988424 + 397 77359902 aspC PSHAa0956 - COG1448E aspartate aminotransferase 1024855-1026705 - 616 77359936 deaD PSHAa0990 - COG0513LKJ ATP-dependent RNA helicase, cold shock protein A 1031436-1032935 + 499 77359942 nusA PSHAa0996 - COG0195K transcription elongation factor NusA 1032961-1035621 + 886 77359943 infB PSHAa0997 - COG0532J translation initiation factor IF-2 1037329-1037598 + 89 77359946 rpsO PSHAa1000 - - 30S ribosomal subunit protein S15 1037949-1040075 + 708 77359947 pnp PSHAa1001 - COG1185J polynucleotide phosphorylase, has polyadenylase activity; part of the degradosome 1052507-1052719 + 70 77359960 - PSHAa1014 - - secreted calmodulin-like protein 1053177-1053392 + 71 77359962 - PSHAa1016 - - secreted calmodulin-like protein 1055385-1055624 - 79 77359964 - PSHAa1018 - COG0724R hypothetical protein 1057979-1059142 - 387 77359968 dacA PSHAa1022 - COG1686M D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5 1084026-1085435 - 469 77359992 miaB PSHAa1046 - COG0621J involved in methylthiolation of isopentenylated A37 derivatives in tRNA, Fe-S protein 1088735-1089826 - 363 77359994 engD PSHAa1051 - COG0012J GTP-dependent nucleic acid-binding protein engD 1090482-1091096 - 204 77359996 rplY PSHAa1053 - COG1825J 50S ribosomal protein L25 1091267-1092214 - 315 77359997 prs PSHAa1054 - COG0462FE ribose-phosphate pyrophosphokinase 1185265-1185969 + 234 77360085 - PSHAa1142 - - hypothetical protein 1222601-1222942 - 113 77360115 - PSHAa1172 - - hypothetical protein 1233082-1233285 + 67 77360127 cspC PSHAa1184 - - cold shock protein, transcription antiterminator, affects expression of rpoS and uspA 1235530-1236894 + 454 77360131 - PSHAa1188 - COG0811U MotA/TolQ/ExbB proton channel protein 1238466-1239725 + 419 77360135 - PSHAa1192 - - TPR domain protein (tetratricopeptide repeat) 1242452-1242988 + 178 77360139 - PSHAa1196 - - hypothetical protein 1244810-1244932 + 40 77360142 - PSHAa1199 - - hypothetical protein 1248237-1248563 + 108 77360145 - PSHAa1202 - COG0718S conserved protein of unknown function likely to be involved in DNA repair 1254422-1255066 + 214 77360151 adk PSHAa1208 - COG0563F adenylate kinase 1262989-1263570 - 193 77360158 sodB PSHAa1215 - COG0605P iron superoxide dismutase 1263838-1264176 + 112 77360159 - PSHAa1216 - COG0278O conserved protein of unknown function with thioredoxin-like domain 1269324-1269935 + 203 77360165 grpE PSHAa1222 - COG0576O nucleotide exchange factor 1284839-1285495 - 218 77360177 - PSHAa1234 - COG0778C Major NAD(P)H-flavin oxidoreductase 1357277-1357444 - 55 77360243 - PSHAa1300 - - hypothetical protein 1431835-1432548 - 237 77360313 - PSHAa1370 - - hypothetical protein 1451304-1452425 - 373 77360329 adhC PSHAa1386 - COG1062C alcohol dehydrogenase class III 1462844-1463290 - 148 77360338 - PSHAa1395 - - hypothetical protein 1484819-1485439 + 206 77360357 fklB PSHAa1414 - COG0545O FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase) 1500347-1502014 + 555 77360368 rpsA PSHAa1425 - COG0539J 30S ribosomal subunit protein S1; site specific RNA helicase; component of the degradosome 1502078-1502365 + 95 77360369 ihfB PSHAa1426 - - integration host factor (iHF), beta subunit, site-specific recombination 1642630-1643841 + 403 77360516 - PSHAa1575 - COG3203M outer membrane porin 1645589-1645786 - 65 77360520 - PSHAa1579 - - hypothetical protein 1679252-1680649 + 465 77360557 asnS PSHAa1616 - COG0017J asparaginyl-tRNA synthetase 1685341-1685910 + 189 77360562 - PSHAa1621 - - TonB-dependent receptor protein with OmpA-like transmembrane domain 1687203-1688837 + 544 77360564 proS PSHAa1623 - COG0442J prolyl-tRNA synthetase 1707233-1707760 + 175 77360580 fldA PSHAa1639 - COG0716C flavodoxin 1711528-1712400 - 290 77360585 sucD PSHAa1644 - COG0074C succinyl-CoA synthetase, alpha subunit, NAD(P)-binding 1712400-1713566 - 388 77360586 sucC PSHAa1645 - COG0045C succinyl-CoA synthetase subunit beta 1713744-1715282 - 512 77360587 sucB PSHAa1646 - COG0508C dihydrolipoyltranssuccinate transferase, component of the 2-oxoglutarate dehydrogenase complex 1718921-1720693 - 590 77360590 sdhA PSHAa1649 - COG1053C succinate dehydrogenase catalytic subunit 1721816-1723102 + 428 77360594 gltA PSHAa1653 - COG0372C citrate synthase 1768432-1769802 + 456 77360633 purB PSHAa1692 - COG0015F adenylosuccinate lyase 1796964-1798085 + 373 77360658 - PSHAa1718 - COG0686E Alanine dehydrogenase 1806674-1808896 + 740 77360667 - PSHAa1727 - - Isocitrate dehydrogenase 1835908-1836786 - 292 77360690 - PSHAa1750 - COG2084I tartronate semialdehyde reductase (TSAR) 1862859-1863983 - 374 77360714 prpC PSHAa1774 - COG0372C citrate synthase 1864009-1864881 - 290 77360715 prpB PSHAa1775 - COG2513G 2-methylisocitrate lyase 1896958-1897194 - 78 77360747 acpP PSHAa1807 - COG0236IQ acyl carrier protein 1900236-1900406 - 56 77360751 rpmF PSHAa1811 - COG0333J 50S ribosomal subunit protein L32 1904072-1907287 + 1071 77360756 rne PSHAa1816 - COG1530J RNase E: endoribonuclease for rRNA processing and mRNA degradation; member of the degradosome; involved in the production of deoxyribonucleotides via the formation of NDPs 1934259-1936706 - 815 77360780 - PSHAa1840 - COG1629P TonB-dependent receptor 1940604-1941638 + 344 77360785 - PSHAa1845 - COG2010C cytochrome c oxidase, subunit CcoP 1948746-1949465 + 239 77360794 - PSHAa1854 - COG1335Q hydrolase 1972432-1972974 - 180 77360808 pal PSHAa1870 - COG2885M required for outer membrane integrity, uptake of group A colicins, and translocation of phage DNA 2005515-2006957 - 480 77360838 gapA PSHAa1900 - COG0057G glyceraldehyde 3-phosphate dehydrogenase 2032144-2032947 - 267 77360853 - PSHAa1921 - - hypothetical protein 2096858-2099500 - 880 77360913 - PSHAa1989 - COG1629P hypothetical protein 2134658-2134822 + 54 77360944 - PSHAa2020 - COG4890S hypothetical protein 2141142-2141561 - 139 77360951 skp PSHAa2027 - COG2825M periplasmic molecular chaperone for outer membrane proteins 2148634-2149155 - 173 77360957 frr PSHAa2033 - - ribosome releasing factor 2150113-2150964 - 283 77360959 tsf PSHAa2035 - - elongation factor Ts 2151068-2151796 - 242 77360960 rpsB PSHAa2036 - - 30S ribosomal subunit protein S2 2176431-2176703 - 90 77360983 hupB PSHAa2059 - - DNA-binding protein 2181618-2182922 - 434 77360987 tig PSHAa2063 - COG0544O trigger factor 2186804-2187295 + 163 77360990 ppiB PSHAa2066 - COG0652O peptidyl-prolyl cis-trans isomerase B (rotamase B) 2202719-2203930 - 403 77361004 fabB PSHAa2080 - COG0304IQ 3-oxoacyl-[acyl-carrier-protein] synthase I 2210121-2210243 + 40 77361011 - PSHAa2087 - - hypothetical protein 2304360-2305406 + 348 77361091 melA PSHAa2168 - COG3185ER 4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase) 2320064-2322199 + 711 77361107 dcp PSHAa2184 - COG0339E Peptidyl-dipeptidase dcp (Dipeptidyl carboxypeptidase) 2330771-2331049 - 92 77361117 - PSHAa2194 - - calcium-binding EF-hand domain 2341440-2341628 + 62 77361128 - PSHAa2205 - - hypothetical protein 2357271-2357468 + 65 77361141 - PSHAa2218 - COG3237S hypothetical protein 2373815-2374027 - 70 77361157 - PSHAa2234 - - hypothetical protein 2375313-2376545 - 410 77361159 nrqF PSHAa2236 - COG2871C Na(+)-translocating NADH-quinone reductase subunit F 2376564-2377172 - 202 77361160 nqrE PSHAa2237 - COG2209C Na(+)-translocating NADH-quinone reductase subunit E (Na(+)-translocating NQR subunit E) (Na(+)-NQR subunit E) (NQR complex subunit E) 2456243-2457436 - 397 77361239 kbl PSHAa2316 - COG0156H 2-amino-3-ketobutyrate coenzyme A ligase 2522194-2523450 - 418 77361292 glyA PSHAa2376 - COG0112E serine hydroxymethyltransferase 2578308-2579552 - 414 77361342 fadL PSHAa2426 - COG2067I Long-chain fatty acid transport protein precursor (Outer membrane fadL protein) 2588854-2589306 - 150 77361355 rplI PSHAa2439 - COG0359J 50S ribosomal subunit protein L9 2589675-2589764 + 29 77361358 - PSHAa2442 - - hypothetical protein 2589945-2590286 - 113 77361359 rpsF PSHAa2443 - COG0360J 30S ribosomal protein S6 2624166-2624555 - 129 77361389 gcvH PSHAa2474 - COG0509E glycine cleavage system protein H 2639786-2640067 + 93 77361403 ppiC PSHAa2488 - COG0760O peptidyl-prolyl cis-trans isomerase C (rotamase C) 2640724-2641074 + 116 77361405 - PSHAa2490 - - hypothetical protein 2649652-2650902 - 416 77361414 ftsZ PSHAa2499 - COG0206D Cell division protein ftsZ 2680229-2680855 - 208 77361442 sspA PSHAa2527 - COG0625O stringent starvation protein A 2684056-2684445 - 129 77361446 rpsI PSHAa2531 - - 30S ribosomal subunit protein S9 2684457-2684885 - 142 77361447 rplM PSHAa2532 - - 50S ribosomal subunit protein L13 2793625-2793780 - 51 77361556 rpmG PSHAa2641 - COG0267J 50S ribosomal subunit protein L33 2810296-2810553 - 85 77361570 rpmA PSHAa2655 - - 50S ribosomal protein L27 2812379-2813311 - 310 77361573 mdh PSHAa2658 - COG0039C malate dehydrogenase 2824287-2824670 - 127 77361585 iscU PSHAa2670 - COG0822C Fe-S assembly protein 2824714-2825931 - 405 77361586 iscS PSHAa2671 - COG1104E cysteine desulfurase (tRNA sulfurtransferase; RNA 4-thiouridine sulfurtransferase), PLP-dependent 2924073-2924705 - 210 77361667 - PSHAa2752 - COG2863C Cytochrome c4 2969143-2969418 + 91 77361701 rpoZ PSHAa2791 - COG1758K DNA-directed RNA polymerase omega chain (RNAP omega subunit) (Transcriptase omega chain) (RNA polymerase omega subunit) 2987035-2987421 - 128 77361712 rpsK PSHAa2808 - COG0100J 30S ribosomal subunit protein S11 2989829-2990011 - 60 77361716 rpmD PSHAa2812 - COG1841J 50S ribosomal subunit protein L30 2990890-2991423 - 177 77361719 rplF PSHAa2815 - COG0097J 50S ribosomal protein L6 3013006-3013635 - 209 77361745 - PSHAa2842 - COG2885M lipoprotein 3019452-3020315 + 287 77361750 speE PSHAa2847 - COG0421E spermidine synthase 3034660-3035235 + 191 77361763 - PSHAa2860 - COG0316S,COG0694O hypothetical protein 3071069-3071821 - 250 77361803 fkpA PSHAa2901 - COG0545O periplasmic peptidyl-prolyl cis-trans isomerase 3079383-3080567 - 394 77361813 tufB PSHAa2911 - COG0050J protein chain elongation factor EF-Tu; possible GTP-binding factor (duplicate of tufA) 3114870-3116954 - 694 77361842 - PSHAa2940 - COG0480J elongation factor EF-2 3132931-3133404 + 157 77361856 dpsB PSHAa2954 - COG0783P DNA-binding DPS protein 3152440-3153759 + 439 77361870 - PSHAa2968 - - hypothetical protein 3166159-3166368 + 69 77361880 cspE PSHAa2978 - - RNA chaperone, transcription antiterminator, affects expression of rpoS and uspA 3166556-3166765 + 69 77361881 cspE PSHAa2979 - - RNA chaperone, transcription antiterminator, affects expression of rpoS and uspA 3166953-3167162 + 69 77361882 cspE PSHAa2980 - - Cold shock-like protein cspE, RNA chaperone, transcription antiterminator, affects expression of rpoS and uspA