Shewanella amazonensis SB2B, complete genome - 1..4306142


Location	Strand	Length	PID		Gene	Synonym	Code	COG	Product

7951-9576	-	541	119773151	-	Sama_0009	-	-	inner membrane protein, 60 kDa 
10175-10312	-	45	119773154	-	Sama_0012	-	-	50S ribosomal protein L34 
14471-16888	+	805	119773158	-	Sama_0016	-	-	DNA topoisomerase (ATP-hydrolyzing) 
23457-25526	-	689	119773167	-	Sama_0025	-	-	Glycine--tRNA ligase 
25552-26457	-	301	119773168	-	Sama_0026	-	-	Glycine--tRNA ligase 
67576-68055	+	159	119773204	-	Sama_0062	-	-	protein-export protein SecB 
96995-98335	-	446	119773228	-	Sama_0086	-	-	oxygen-independent coproporphyrinogen III oxidase 
102313-102933	-	206	119773233	-	Sama_0091	-	-	cytochrome c, class I 
109791-110816	-	341	119773239	-	Sama_0097	-	-	threonine 3-dehydrogenase 
110838-112031	-	397	119773240	-	Sama_0098	-	-	Glycine C-acetyltransferase 
137358-138170	-	270	119773266	-	Sama_0124	-	-	putative sulfate transport system substrate-binding protein 
193980-195521	-	513	119773306	-	Sama_0165	-	-	Phosphoenolpyruvate carboxykinase (ATP) 
233618-234802	+	394	119773340	-	Sama_0199	-	-	translation elongation factor Tu 
236531-237232	+	233	119773344	-	Sama_0203	-	-	50S ribosomal protein L1 
238041-238412	+	123	119773346	-	Sama_0205	-	-	50S ribosomal protein L7/L12 
238654-242682	+	1342	119773347	-	Sama_0206	-	-	DNA-directed RNA polymerase 
242768-246982	+	1404	119773348	-	Sama_0207	-	-	DNA-directed RNA polymerase 
247158-247532	+	124	119773349	-	Sama_0208	-	-	ribosomal protein S12 
247612-248082	+	156	119773350	-	Sama_0209	-	-	30S ribosomal protein S7 
250344-251528	+	394	119773352	-	Sama_0211	-	-	translation elongation factor Tu 
252232-252870	+	212	119773354	-	Sama_0213	-	-	50S ribosomal protein L3 
253490-253792	+	100	119773356	-	Sama_0215	-	-	ribosomal protein L25/L23 
253804-254628	+	274	119773357	-	Sama_0216	-	-	50S ribosomal protein L2 
254938-255270	+	110	119773359	-	Sama_0218	-	-	50S ribosomal protein L22 
255284-255976	+	230	119773360	-	Sama_0219	-	-	30S ribosomal protein S3 
256589-256837	+	82	119773363	-	Sama_0222	-	-	30S ribosomal subunit protein S17 
257717-258256	+	179	119773366	-	Sama_0225	-	-	50S ribosomal protein L5 
258598-258993	+	131	119773368	-	Sama_0227	-	-	30S ribosomal protein S8 
259004-259537	+	177	119773369	-	Sama_0228	-	-	50S ribosomal protein L6 
260424-260603	+	59	119773372	-	Sama_0231	-	-	50S ribosomal protein L30 
262410-262523	+	37	119773375	-	Sama_0234	-	-	ribosomal protein L36 
269706-269999	+	97	119773387	-	Sama_0246	-	-	cytochrome c 
296823-298046	+	407	119773400	-	Sama_0259	-	-	Argininosuccinate synthase 
302424-302807	-	127	119773404	-	Sama_0263	-	-	YjgF-like protein 
304957-305235	-	92	119773406	-	Sama_0265	-	-	DNA-directed RNA polymerase, omega subunit 
387592-388305	+	237	119773461	-	Sama_0320	-	-	tRNA nucleotidyltransferase 
395508-395681	+	57	119773470	-	Sama_0329	-	-	ribosomal protein L33 
429123-430307	+	394	119773499	-	Sama_0358	-	-	cell division protein FtsZ 
453823-456519	+	898	119773516	-	Sama_0375	-	-	pyruvate dehydrogenase, E1 component 
458630-460060	+	476	119773518	-	Sama_0377	-	-	dihydrolipoamide dehydrogenase 
467111-469171	+	686	119773521	-	Sama_0380	-	-	Endothelin-converting enzyme 1 
470282-472879	+	865	119773523	-	Sama_0382	-	-	Aconitate hydratase 
478996-480060	+	354	119773528	-	Sama_0387	-	-	Uroporphyrinogen decarboxylase 
489862-491157	-	431	119773534	-	Sama_0394	-	-	Phosphoribosylamine--glycine ligase 
491215-492804	-	529	119773535	-	Sama_0395	-	-	Phosphoribosylaminoimidazolecarboxamide formyltransferase 
497645-498667	-	340	119773540	-	Sama_0400	-	-	putative lipoprotein 
524819-527146	-	775	119773568	-	Sama_0428	-	-	peptidase M4, thermolysin 
542817-544142	-	441	119773580	-	Sama_0440	-	-	heat shock protein HslVU, ATPase subunit HslU 
545443-547188	-	581	119773583	-	Sama_0443	-	-	Arginine--tRNA ligase 
552877-553089	+	70	119773587	-	Sama_0447	-	-	ribosomal protein L31 
595731-597212	-	493	119773625	-	Sama_0485	-	-	MiaB-like putative RNA modifying enzyme YliG 
628459-630372	-	637	119773652	-	Sama_0512	-	-	ATP-dependent RNA helicase DeaD 
636101-636805	+	234	119773656	-	Sama_0516	-	-	single-strand binding protein 
669483-670568	-	361	119773684	-	Sama_0544	-	-	outer membrane porin, putative 
720879-725432	+	1517	119773718	-	Sama_0580	-	-	acetyl-CoA carboxylase multifunctional enzyme accADC, carboxyl transferase subunit alpha/carboxyl transferase subunit beta/biotin carboxylase 
729256-731346	+	696	119773722	-	Sama_0584	-	-	elongation factor EF-G 
734874-736049	-	391	119773727	-	Sama_0589	-	-	phosphate-selective porin O and P 
748603-749136	-	177	119773736	-	Sama_0598	-	-	Inorganic diphosphatase 
770595-771164	+	189	119773755	-	Sama_0617	-	-	alkyl hydroperoxide reductase, C subunit 
787020-792071	+	1683	119773773	-	Sama_0635	-	-	serine protease, subtilase family 
797333-798097	+	254	119773780	-	Sama_0642	-	-	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA 
803874-805277	+	467	119773786	-	Sama_0648	-	-	Nitrite reductase (cytochrome; ammonia-forming) 
828182-829117	+	311	119773810	-	Sama_0672	-	-	malate dehydrogenase 
954860-955390	+	176	119773908	-	Sama_0771	-	-	Hypoxanthine phosphoribosyltransferase 
973085-975946	-	953	119773927	-	Sama_0790	-	-	valyl-tRNA synthetase 
979556-981064	-	502	119773932	-	Sama_0795	-	-	Leucyl aminopeptidase 
1006839-1008701	-	620	119773960	-	Sama_0823	-	-	RNA polymerase sigma-70 factor 
1011081-1011296	-	71	119773963	-	Sama_0826	-	-	ribosomal protein S21 
1016164-1016427	-	87	119773970	-	Sama_0833	-	-	major outer membrane lipoprotein, putative 
1023262-1024545	-	427	119773976	-	Sama_0839	-	-	glutamate-1-semialdehyde-2,1-aminomutase 
1028356-1028706	+	116	119773980	-	Sama_0843	-	-	HesB/YadR/YfhF family protein 
1066895-1068685	+	596	119774015	-	Sama_0878	-	-	GTP-binding protein LepA 
1078064-1078315	+	83	119774026	-	Sama_0889	-	-	ribosomal protein S16 
1079662-1080015	+	117	119774029	-	Sama_0892	-	-	ribosomal protein L19 
1089750-1090193	-	147	119774038	-	Sama_0901	-	-	cytochrome c, class II 
1104264-1105370	-	368	119774051	-	Sama_0914	-	-	OmpA/MotB 
1113292-1113558	-	88	119774058	-	Sama_0921	-	-	ribosomal protein S20 
1116414-1119236	+	940	119774061	-	Sama_0924	-	-	isoleucyl-tRNA synthetase 
1132332-1134977	+	881	119774075	-	Sama_0938	-	-	TonB-dependent receptor 
1161111-1163759	+	882	119774098	-	Sama_0961	-	-	translation initiation factor IF-2 
1165272-1165541	+	89	119774101	-	Sama_0964	-	-	ribosomal protein S15 
1167839-1169938	+	699	119774103	-	Sama_0966	-	-	Polyribonucleotide nucleotidyltransferase 
1175591-1176400	+	269	119774109	-	Sama_0972	-	-	putative sugar hydrolase 
1180325-1181035	+	236	119774113	-	Sama_0976	-	-	purine nucleoside phosphorylase 
1215224-1216621	-	465	119774141	-	Sama_1004	-	-	peptidase, U32 family 
1227104-1228771	-	555	119774150	-	Sama_1013	-	-	ABC transporter, ATP-binding protein 
1229015-1230268	+	417	119774151	-	Sama_1014	-	-	Glycine hydroxymethyltransferase 
1255111-1256406	+	431	119774173	-	Sama_1036	-	-	Phosphopyruvate hydratase 
1265502-1266569	+	355	119774183	-	Sama_1046	-	-	recA protein 
1299682-1300608	+	308	119774210	-	Sama_1073	-	-	porin, gram-negative type 
1303044-1304015	+	323	119774213	-	Sama_1076	-	-	phosphate-binding protein 
1384757-1385581	-	274	119774273	-	Sama_1136	-	-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 
1389252-1390028	+	258	119774276	-	Sama_1139	-	-	30S ribosomal protein S2 
1390156-1391007	+	283	119774277	-	Sama_1140	-	-	translation elongation factor Ts 
1391845-1392402	+	185	119774279	-	Sama_1142	-	-	ribosome recycling factor 
1416155-1417873	-	572	119774298	-	Sama_1161	-	-	prolyl-tRNA synthetase 
1430689-1432845	-	718	119774309	-	Sama_1172	-	-	Peptidyl-dipeptidase Dcp 
1473553-1475010	+	485	119774338	-	Sama_1201	-	-	peptidase M4, thermolysin 
1481971-1483941	-	656	119774345	-	Sama_1208	-	-	decaheme cytochrome c 
1497161-1498828	+	555	119774353	-	Sama_1216	-	-	Glutamine--tRNA ligase 
1501199-1501708	-	169	119774357	-	Sama_1220	-	-	peptidyl-prolyl cis-trans isomerase B 
1504977-1506281	+	434	119774360	-	Sama_1223	-	-	trigger factor 
1511088-1511360	+	90	119774364	-	Sama_1227	-	-	DNA-binding protein, HU family 
1514278-1515480	-	400	119774367	-	Sama_1230	-	-	hypothetical protein 
1522209-1522892	+	227	119774374	-	Sama_1237	-	-	phage shock protein A 
1537855-1540578	+	907	119774389	-	Sama_1252	-	-	TonB-dependent receptor 
1543477-1544832	+	451	119774392	-	Sama_1255	-	-	MotA/TolQ/ExbB proton channel family protein 
1560147-1560584	-	145	119774409	-	Sama_1272	-	-	hypothetical protein 
1581148-1581531	+	127	119774431	-	Sama_1294	-	-	NifU family protein 
1586191-1586622	+	143	119774438	-	Sama_1301	-	-	Nucleoside-diphosphate kinase 
1588539-1588982	+	147	119774441	-	Sama_1304	-	-	hypothetical protein 
1599152-1599796	+	214	119774452	-	Sama_1315	-	-	Adenylate kinase 
1662435-1663076	+	213	119774508	-	Sama_1371	-	-	outer membrane protein OmpW, putative 
1667012-1668505	+	497	119774513	-	Sama_1376	-	-	methylmalonate-semialdehyde dehydrogenase 
1677573-1679168	+	531	119774523	-	Sama_1386	-	-	ABC transporter, ATP-binding protein 
1695646-1698549	-	967	119774536	-	Sama_1399	-	-	TonB-dependent receptor 
1731406-1732692	-	428	119774559	-	Sama_1422	-	-	Citrate (Si)-synthase 
1733843-1735609	+	588	119774562	-	Sama_1425	-	-	Succinate dehydrogenase 
1735622-1736329	+	235	119774563	-	Sama_1426	-	-	Succinate dehydrogenase (ubiquinone) 
1736522-1739344	+	940	119774564	-	Sama_1427	-	-	2-oxoglutarate dehydrogenase E1 component 
1739373-1740575	+	400	119774565	-	Sama_1428	-	-	2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) 
1740653-1741819	+	388	119774566	-	Sama_1429	-	-	Succinate--CoA ligase (ADP-forming) 
1741819-1742691	+	290	119774567	-	Sama_1430	-	-	succinyl-CoA synthetase alpha chain 
1754414-1754779	+	121	119774581	-	Sama_1444	-	-	cytochrome c3 
1812619-1814901	-	760	119774635	-	Sama_1498	-	-	Formate C-acetyltransferase 
1822416-1825115	-	899	119774640	-	Sama_1503	-	-	outer membrane receptor protein 
1831345-1832313	-	322	119774645	-	Sama_1508	-	-	cysteine synthase A 
1912255-1913292	-	345	119774705	-	Sama_1568	-	-	4-hydroxyphenylpyruvate dioxygenase 
1940681-1945522	+	1613	119774729	-	Sama_1592	-	-	hypothetical protein 
1973022-1973309	+	95	119774751	-	Sama_1614	-	-	ribosomal protein L25 
1989511-1990314	-	267	119774762	-	Sama_1625	-	-	hypothetical protein 
2005890-2006960	-	356	119774776	-	Sama_1640	-	-	alcohol dehydrogenase, iron-containing 
2006980-2008167	-	395	119774777	-	Sama_1641	-	-	polysaccharide biosynthesis protein 
2030305-2033127	-	940	119774797	-	Sama_1661	-	-	TonB dependent receptor-related protein 
2058084-2059484	-	466	119774820	-	Sama_1684	-	-	asparaginyl-tRNA synthetase 
2062237-2063772	+	511	119774824	-	Sama_1688	-	-	fumarate hydratase, class I, anaerobic, putative 
2080349-2080915	-	188	119774835	-	Sama_1699	-	-	translation elongation factor P 
2082200-2082727	-	175	119774837	-	Sama_1701	-	-	flavodoxin 
2118311-2121016	+	901	119774866	-	Sama_1731	-	-	DNA gyrase subunit A 
2126185-2127852	+	555	119774871	-	Sama_1736	-	-	30S ribosomal subunit protein S1 
2162135-2162329	+	64	119774902	-	Sama_1767	-	-	50S ribosomal protein L35 
2162346-2162705	+	119	119774903	-	Sama_1768	-	-	ribosomal protein L20 
2163974-2165086	-	370	119774905	-	Sama_1770	-	-	alanine dehydrogenase 
2198300-2199739	-	479	119774941	-	Sama_1806	-	-	Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 
2200983-2201996	+	337	119774943	-	Sama_1808	-	-	Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 
2237370-2239889	-	839	119774973	-	Sama_1838	-	-	TonB-dependent receptor, putative 
2243378-2245153	-	591	119774978	-	Sama_1843	-	-	aspartyl-tRNA synthetase 
2278706-2281153	+	815	119775005	-	Sama_1870	-	-	oxidoreductase, acyl-CoA dehydrogenase family 
2346156-2346488	-	110	119775054	-	Sama_1919	-	-	glutaredoxin-related protein 
2346731-2347315	+	194	119775055	-	Sama_1920	-	-	Superoxide dismutase 
2398716-2398925	-	69	119775105	-	Sama_1970	-	-	putative cold-shock DNA-binding domain protein 
2408197-2408430	-	77	119775114	-	Sama_1979	-	-	acyl carrier protein 
2412348-2412518	-	56	119775119	-	Sama_1984	-	-	ribosomal protein L32 
2456354-2458069	-	571	119775156	-	Sama_2021	-	-	5'-nucleotidase 
2466286-2466768	-	160	119775162	-	Sama_2027	-	-	peptidylprolyl isomerase, FKBP-type 
2484933-2486960	+	675	119775184	-	Sama_2049	-	-	methionyl-tRNA synthetase 
2493959-2496184	-	741	119775194	-	Sama_2059	-	-	Isocitrate dehydrogenase (NADP(+)) 
2499725-2501095	+	456	119775199	-	Sama_2064	-	-	Adenylosuccinate lyase 
2503088-2504122	+	344	119775202	-	Sama_2067	-	-	leucine dehydrogenase 
2509179-2511548	-	789	119775207	-	Sama_2072	-	-	Pyruvate, water dikinase 
2529076-2529612	-	178	119775220	-	Sama_2085	-	-	peptidoglycan-associated lipoprotein 
2538204-2538809	-	201	119775229	-	Sama_2094	-	-	alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen 
2541383-2542420	+	345	119775232	-	Sama_2097	-	-	Phosphoribosylformylglycinamidine cyclo-ligase 
2602880-2604091	-	403	119775289	-	Sama_2154	-	-	3-oxoacyl-(acyl-carrier-protein) synthase I 
2643189-2645600	+	803	119775320	-	Sama_2185	-	-	cold-active serine alkaline protease 
2682473-2683459	-	328	119775354	-	Sama_2219	-	-	fumarylacetoacetate hydrolase family protein 
2819978-2823859	-	1293	119775485	-	Sama_2350	-	-	Phosphoribosylformylglycinamidine synthase 
2832531-2834108	-	525	119775492	-	Sama_2358	-	-	GMP synthase 
2834206-2835672	-	488	119775493	-	Sama_2359	-	-	IMP dehydrogenase 
2839999-2840619	-	206	119775497	-	Sama_2363	-	-	hypothetical protein 
2858428-2859747	-	439	119775514	-	Sama_2380	-	-	isocitrate lyase 
2867670-2868152	+	160	119775522	-	Sama_2388	-	-	SsrA-binding protein 
2917552-2918562	+	336	119775557	-	Sama_2423	-	-	Isocitrate dehydrogenase (NAD(+)) 
2990992-2991318	-	108	119775621	-	Sama_2488	-	-	hypothetical protein 
3005923-3009153	-	1076	119775635	-	Sama_2503	-	-	carbamoyl-phosphate synthase, large subunit 
3011370-3011987	-	205	119775638	-	Sama_2506	-	-	peptidyl-prolyl cis-trans isomerase FklB 
3014764-3015894	-	376	119775642	-	Sama_2510	-	-	chaperone protein DnaJ 
3015983-3017896	-	637	119775643	-	Sama_2511	-	-	chaperone protein DnaK 
3026955-3028415	+	486	119775651	-	Sama_2519	-	-	Xaa-His dipeptidase 
3043112-3044368	-	418	119775666	-	Sama_2534	-	-	NADH:ubiquinone oxidoreductase, Na translocating, beta subunit 
3045032-3045658	-	208	119775668	-	Sama_2536	-	-	NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD 
3046448-3047647	-	399	119775670	-	Sama_2538	-	-	NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB 
3076087-3077034	+	315	119775702	-	Sama_2570	-	-	Ribose-phosphate diphosphokinase 
3078197-3079288	-	363	119775703	-	Sama_2571	-	-	hypothetical protein 
3081949-3083400	+	483	119775707	-	Sama_2575	-	-	tRNA-i(6)A37 modification enzyme MiaB 
3089606-3092200	+	864	119775714	-	Sama_2582	-	-	leucyl-tRNA synthetase 
3130764-3132851	+	695	119775747	-	Sama_2615	-	-	Endothelin-converting enzyme 1 
3165155-3166255	-	366	119775774	-	Sama_2642	-	-	polyamine ABC transporter, periplasmic polyamine-binding protein 
3199609-3200880	+	423	119775806	-	Sama_2674	-	-	phosphate transporter 
3201868-3205044	+	1058	119775808	-	Sama_2676	-	-	proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase, putative 
3252165-3255053	-	962	119775851	-	Sama_2719	-	-	Glycine dehydrogenase (decarboxylating) 
3255155-3255544	-	129	119775852	-	Sama_2720	-	-	glycine cleavage system H protein 
3255570-3256664	-	364	119775853	-	Sama_2721	-	-	glycine cleavage system T protein 
3295251-3296318	-	355	119775888	-	Sama_2756	-	-	Fructose-bisphosphate aldolase 
3296451-3297632	-	393	119775889	-	Sama_2757	-	-	Phosphoglycerate kinase 
3298852-3300843	-	663	119775891	-	Sama_2759	-	-	Transketolase 
3301224-3302375	+	383	119775892	-	Sama_2760	-	-	Methionine adenosyltransferase 
3366537-3366791	-	84	119775960	-	Sama_2828	-	-	ribosomal protein L27 
3366806-3367117	-	103	119775961	-	Sama_2829	-	-	ribosomal protein L21 
3416440-3417942	-	500	119776009	-	Sama_2877	-	-	lysyl-tRNA synthetase 
3491171-3493387	-	738	119776070	-	Sama_2938	-	-	hypothetical protein 
3495842-3497308	-	488	119776073	-	Sama_2941	-	-	Catalase 
3502876-3504378	+	500	119776079	-	Sama_2947	-	-	hypothetical protein 
3553380-3555863	+	827	119776115	-	Sama_2983	-	-	periplasmic nitrate reductase 
3562175-3564217	+	680	119776122	-	Sama_2990	-	-	hypothetical protein 
3593427-3594125	-	232	119776151	-	Sama_3019	-	-	ubiquinol-cytochrome c reductase cytochrome c1 subunit 
3594125-3595339	-	404	119776152	-	Sama_3020	-	-	ubiquinol-cytochrome c reductase, cytochrome b 
3640832-3641281	-	149	119776193	-	Sama_3061	-	-	ribosomal protein L9 
3641322-3641549	-	75	119776194	-	Sama_3062	-	-	ribosomal protein S18 
3641876-3642283	-	135	119776196	-	Sama_3064	-	-	ribosomal protein S6 
3648923-3649315	-	130	119776202	-	Sama_3070	-	-	ribosomal protein S9 
3649330-3649758	-	142	119776203	-	Sama_3071	-	-	ribosomal protein L13 
3704504-3706141	-	545	119776256	-	Sama_3124	-	-	chaperonin GroEL 
3706197-3706487	-	96	119776257	-	Sama_3125	-	-	chaperonin GroES 
3726423-3726848	-	141	119776270	-	Sama_3138	-	-	hypothetical protein 
3744903-3745175	+	90	119776290	-	Sama_3158	-	-	histone-like DNA-binding protein 
3808397-3808723	+	108	119776348	-	Sama_3216	-	-	thioredoxin 
3808940-3810202	+	420	119776349	-	Sama_3217	-	-	transcription termination factor Rho 
3819669-3819974	+	101	119776358	-	Sama_3226	-	-	DNA-binding protein Fis 
3915169-3916305	+	378	119776427	-	Sama_3295	-	-	2-methylcitrate synthase 
3942818-3944362	-	514	119776445	-	Sama_3313	-	-	cold-active alkaline serine protease 
3949999-3950613	-	204	119776453	-	Sama_3321	-	-	thiol:disulfide interchange protein DsbA 
4007959-4008207	+	82	119776512	-	Sama_3380	-	-	acyl carrier protein, putative 
4042462-4044276	-	604	119776547	-	Sama_3415	-	-	virulence regulator BipA 
4044735-4046144	+	469	119776548	-	Sama_3416	-	-	Glutamate--ammonia ligase 
4059339-4059908	-	189	119776561	-	Sama_3429	-	-	outer membrane protein, putative