Salmonella enterica subsp. enterica serovar Typhi str. CT18, complete genome - 1..4809037 Location Strand Length PID Gene Synonym Code COG Product 190-255 + 21 16758994 thrL STY0001 - - thr operon leader peptide 7665-8618 + 317 16759000 talB STY0007 - - transaldolase 11594-13510 + 638 16759005 dnaK STY0012 - COG0443O molecular chaperone DnaK 17873-19972 + 699 16759011 - STY0018 - COG3979R putative chitinase 64859-66634 - 591 16759049 oadA STY0064 - COG1038C,COG5016C oxaloacetate decarboxylase 76860-80087 + 1075 16759060 carB STY0077 - COG0458EF carbamoyl-phosphate synthase large subunit 157097-158248 + 383 16759128 ftsZ STY0153 - COG0206D cell division protein FtsZ 160107-162812 + 901 16759131 secA STY0156 - COG0653U translocase 179387-182050 + 887 16759149 aceE STY0175 - COG2609C pyruvate dehydrogenase E1 component 182065-183954 + 629 16759150 aceF STY0176 - COG0508C dihydrolipoamide acetyltransferase 184153-185580 + 475 16759151 lpdA STY0177 - COG1249C dihydrolipoamide dehydrogenase 189006-191603 + 865 16759155 acnB STY0181 - COG1049C aconitate hydratase 207905-208285 - 126 16759172 panD STY0198 - - aspartate 1-decarboxylase precursor 234219-235499 - 426 16759193 hemL STY0223 - COG0001H glutamate-1-semialdehyde aminotransferase 246298-247122 - 274 16759203 dapD STY0236 - COG2171E 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 249937-250731 - 264 16759205 map STY0238 - COG0024J methionine aminopeptidase 251181-251906 + 241 16759206 rpsB STY0239 - - 30S ribosomal protein S2 252164-253015 + 283 16759207 tsf STY0240 - - elongation factor Ts 253160-253885 + 241 16759208 pyrH STY0241 - COG0528F uridylate kinase 269925-270884 + 319 16759222 accA STY0255 - COG0825I acetyl-CoA carboxylase alpha subunit 280765-282483 - 572 16759234 proS STY0269 - COG0442J prolyl-tRNA synthetase 283821-284636 - 271 16759237 yaeC STY0272 - COG1464P putative lipoprotein precursor 315281-315766 + 161 16759265 - STY0302 - - hypothetical protein 450278-450880 - 200 16759380 - STY0440 - COG0450O probable peroxidase 454176-454508 + 110 16759384 yajC STY0444 - COG1862U preprotein translocase subunit YajC 459745-460608 - 287 16759391 tsx STY0451 - COG3248M nucleoside-specific channel-forming protein tsx precursor 486404-486733 - 109 16759420 cyoD STY0482 - COG3125C cytochrome o ubiquinol oxidase C subunit 486733-487347 - 204 16759421 cyoC STY0483 - COG1845C cytochrome o ubiquinol oxidase subunit III 493813-495111 + 432 16759427 tig STY0489 - COG0544O trigger factor 496233-497504 + 423 16759429 clpX STY0491 - COG1219O ATP-dependent protease ATP-binding subunit 535731-536060 + 109 16759464 ybaB STY0529 - COG0718S hypothetical protein 536752-538650 + 632 16759466 htpG STY0531 - COG0326O heat shock protein 90 539066-539710 + 214 16759467 adk STY0532 - COG0563F adenylate kinase 591675-592169 - 164 16759511 ppiB STY0584 - COG0652O peptidyl-prolyl cis-trans isomerase B 654566-655129 + 187 16759567 ahpC STY0653 - COG0450O alkyl hydroperoxide reductase c22 protein 668594-670123 - 509 16759581 citF STY0670 - COG3051C citrate lyase alpha chain 693874-696456 - 860 16759607 leuS STY0699 - COG0495J leucyl-tRNA synthetase 721238-723190 + 650 16759629 nagE STY0723 - COG1263G pts system, N-acetylglucosamine-specific IIABC component 723401-725068 + 555 16759630 glnS STY0724 - COG0008J glutaminyl-tRNA synthetase 725520-726926 + 468 16759631 ybfM STY0725 - - putative outer membrane protein 773502-775268 + 588 16759673 sdhA STY0777 - COG1053C succinate dehydrogenase catalytic subunit 779343-780551 + 402 16759676 sucB STY0780 - COG0508C dihydrolipoamide acetyltransferase 780693-781859 + 388 16759677 sucC STY0781 - COG0045C succinyl-CoA synthetase subunit beta 781859-782728 + 289 16759678 sucD STY0782 - COG0074C succinyl-CoA synthetase alpha subunit 791985-792509 + 174 16759688 pal STY0795 - COG2885M peptidoglycan-associated lipoprotein precursor 800959-801711 - 250 16759697 gpmA STY0804 - COG0588G phosphoglyceromutase 854264-854524 - 86 16759742 ybiJ STY0860 - - hypothetical protein 863334-863849 + 171 16759751 ompX STY0872 - COG3637M outer membrane protein X 924663-926315 - 550 16759810 - STY0933 - - hydroxylamine reductase 965607-967889 - 760 16759843 pflB STY0973 - COG1882C formate acetyltransferase 1 976302-977975 + 557 16759851 rpsA STY0981 - COG0539J 30S ribosomal protein S1 1000298-1001389 - 363 16759868 ompF STY1002 - COG3203M outer membrane protein F precursor 1070003-1071055 - 350 16759951 ompA STY1091 - COG2885M outer membrane protein A 1185516-1185689 + 57 16760067 rpmF STY1230 - COG0333J 50S ribosomal protein L32 1189783-1190019 + 78 16760072 acpP STY1235 - COG0236IQ acyl carrier protein 1196033-1197466 + 477 16760079 ptsG STY1242 - COG1263G PTS system, glucose-specific IIBC component 1247824-1249359 + 511 16760123 narH STY1289 - COG1140C respiratory nitrate reductase 1 beta chain 1259893-1262571 - 892 16760134 adh STY1302 - COG1012C,COG1454C alcohol dehydrogenase 1549534-1549845 + 103 16760407 - STY1613 - - hypothetical protein 1576317-1577468 + 383 16760442 - STY1649 - COG3203M outer membrane protein 1665112-1666524 + 470 16760530 pykF STY1744 - - pyruvate kinase 1666834-1667070 + 78 16760531 lppA STY1745 - - major outer membrane lipoprotein 1697146-1697190 - 14 16760558 pheM STY1774 - - phenylalanyl-tRNA synthetase operon leader peptide 1697311-1697667 - 118 16760559 rplT STY1775 - - 50S ribosomal protein L20 1697718-1697915 - 65 16760560 rpmI STY1776 - COG0291J 50S ribosomal protein L35 1743564-1744559 + 331 16760605 gapA STY1825 - COG0057G glyceraldehyde-3-phosphate dehydrogenase 1792009-1792863 - 284 16760665 kdsA STY1897 - COG2877M 2-dehydro-3-deoxyphosphooctonate aldolase 1799363-1800310 + 315 16760673 prsA STY1906 - COG0462FE ribose-phosphate pyrophosphokinase 1851158-1851958 + 266 16760720 manY STY1960 - - phosphotransferase enzyme II, C component 1857152-1857361 - 69 16760726 cspC STY1967 - - cold shock-like protein CspC 1958745-1959485 - 246 16760849 yebC STY2107 - - hypothetical protein 1960070-1961842 - 590 16760851 aspS STY2109 - COG0173J aspartyl-tRNA synthetase 2041179-2042363 + 394 16760937 ompS1 STY2203 - COG3203M outer membrane protein S1 2073815-2074516 + 233 16760972 pduB STY2244 - - putative propanediol utilization protein PduB 2074535-2076199 + 554 16760973 pduC STY2245 - - glycerol dehydratase large subunit 2090422-2090757 - 111 16760991 - STY2264 - - hypothetical protein 2215321-2217354 + 677 16761097 metG STY2384 - COG0143J,COG0073R methionyl-tRNA synthetase 2292820-2293104 + 94 16761165 rplY STY2461 - COG1825J 50S ribosomal protein L25 2309340-2309999 - 219 16761181 ccmB1 STY2479 - COG2386O heme exporter protein B1 2322394-2323530 - 378 16761195 ompC STY2493 - COG3203M outer membrane protein C 2331373-2334009 - 878 16761200 gyrA STY2499 - COG0188L DNA gyrase subunit A 2339060-2341345 + 761 16761203 nrdA STY2506 - COG0209F ribonucleotide-diphosphate reductase alpha subunit 2341458-2342588 + 376 16761204 nrdB STY2507 - COG0208F ribonucleotide-diphosphate reductase beta subunit 2371590-2372447 - 285 16761233 menB STY2537 - COG0447H naphthoate synthase 2379379-2380656 - 425 16761241 nuoN STY2546 - COG1007C NADH dehydrogenase subunit N 2386919-2389651 - 910 16761248 nuoG STY2553 - COG1034C NADH dehydrogenase gamma subunit 2389676-2391013 - 445 16761249 nuoF STY2554 - COG1894C NADH dehydrogenase I chain F 2402961-2404163 + 400 16761262 ackA STY2567 - COG0282C acetate/propionate kinase 2404240-2406384 + 714 16761263 pta STY2568 - COG0280C,COG0857R phosphate acetyltransferase 2443641-2444855 - 404 16761303 fabB STY2609 - COG0304IQ 3-oxoacyl-(acyl carrier protein) synthase 2505403-2505660 + 85 16761351 ptsH STY2667 - COG1925G phosphocarrier protein HPr 2507478-2507987 + 169 16761352 crr STY2670 - - glucose-specific PTS system enzyme IIA component 2587671-2589248 - 525 16761427 guaA STY2751 - COG0519F,COG0518F bifunctional GMP synthase/glutamine amidotransferase protein 2589318-2590790 - 490 16761428 guaB STY2752 - COG0517R,COG0516F inositol-5-monophosphate dehydrogenase 2624292-2624723 - 143 16761441 ndk STY2771 - - nucleoside diphosphate kinase 2645152-2645538 - 128 16761456 nifU STY2788 - COG0822C NifU-like protein 2645566-2646780 - 404 16761457 - STY2789 - COG1104E cysteine desulfurase 2648547-2649350 + 267 16761460 suhB STY2792 - COG0483G extragenic suppressor protein SuhB 2657781-2659034 - 417 16761468 glyA STY2802 - COG0112E serine hydroxymethyltransferase 2667746-2668084 - 112 16761474 glnB STY2808 - COG0347E nitrogen regulatory protein p-II 2701506-2701889 - 127 16761504 yfiD STY2839 - COG3445R hypothetical protein 2730753-2731100 - 115 16761526 rplS STY2860 - - 50S ribosomal protein L19 2732520-2732768 - 82 16761529 rpsP STY2863 - - 30S ribosomal protein S16 2827753-2828814 - 353 16761605 recA STY2950 - COG0468L recombinase A 2846232-2846774 - 180 16761625 hycF STY2970 - COG1143C hydrogenase 4 Fe-S subunit 2846784-2848493 - 569 16761626 hycE STY2971 - COG3261C,COG3262C formate hydrogenlyase subunit 5 2944316-2945614 - 432 16761724 eno STY3081 - COG0148G phosphopyruvate hydratase 2976309-2977598 + 429 16761748 sdaC STY3109 - COG0814E putative serine transporter 3061741-3063258 - 505 16761821 lysS STY3196 - COG1190J lysyl-tRNA synthetase 3077695-3078087 - 130 16761835 gcvH STY3210 - COG0509E glycine cleavage system protein H 3092747-3093826 - 359 16761850 fba STY3226 - COG0191G fructose-bisphosphate aldolase 3093928-3095091 - 387 16761851 pgk STY3227 - - phosphoglycerate kinase 3100337-3102328 - 663 16761859 tktA STY3236 - COG0021G transketolase 3103463-3104383 - 306 16761861 speB STY3238 - COG0010E agmatinase 3107377-3108531 + 384 16761865 metK STY3243 - COG0192H S-adenosylmethionine synthetase 3197757-3198149 - 130 16761952 - STY3353 - - possible exported protein 3231555-3231770 + 71 16761983 rpsU STY3388 - COG0828J 30S ribosomal protein S21 3301996-3303936 - 646 16762045 - STY3461 - COG0513LKJ ATP-dependent RNA helicase (dead-box protein) 3305058-3307193 - 711 16762047 pnp STY3463 - COG1185J polynucleotide phosphorylase 3307435-3307704 - 89 16762048 rpsO STY3464 - - 30S ribosomal protein S15 3308799-3309200 - 133 16762050 rbfA STY3466 - COG0858J ribosome-binding factor A 3309421-3312099 - 892 16762051 infB STY3467 - COG0532J translation initiation factor IF-2 3312124-3313626 - 500 16762052 nusA STY3468 - COG0195K transcription elongation factor NusA 3319213-3321147 - 644 16762058 ftsH STY3474 - COG0465O cell division protein 3324741-3325913 - 390 16762063 - STY3480 - COG0536R probable GTP-binding protein 3327024-3327281 - 85 16762065 rpmA STY3482 - - 50S ribosomal protein L27 3327301-3327612 - 103 16762066 rplU STY3483 - - 50S ribosomal protein L21 3337638-3338156 + 172 16762080 - STY3497 - COG1934S hypothetical protein 3349044-3353504 + 1486 16762092 gltB STY3510 - COG0069E,COG0070E,COG0067E glutamate synthase [NADPH] large chain precursor 3366017-3366409 - 130 16762104 rpsI STY3524 - - 30S ribosomal protein S9 3366425-3366853 - 142 16762105 rplM STY3525 - - 50S ribosomal protein L13 3373656-3375431 - 591 16762111 oadA STY3532 - COG1038C,COG5016C oxaloacetate decarboxylase 3397118-3398161 - 347 16762133 mreB STY3554 - COG1077D rod shape-determining protein 3404179-3405528 + 449 16762139 accC STY3560 - COG0439I acetyl-CoA carboxylase 3470104-3470424 + 106 16762191 cyaY STY3616 - - frataxin-like protein 3494786-3496045 - 419 16762213 rho STY3638 - COG1158K transcription termination factor Rho 3504733-3506208 - 491 16762222 ilvC STY3648 - COG0059EH ketol-acid reductoisomerase 3530722-3531780 + 352 16762251 - STY3677 - - major capsid protein 3558479-3560068 + 529 16762281 purH STY3709 - - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3560084-3561373 + 429 16762282 purD STY3710 - COG0151F phosphoribosylamine--glycine ligase 3565553-3565825 - 90 16762287 hupA STY3715 - - histone like DNA-binding protein HU-alpha (NS2) (HU-2) 3576977-3581200 - 1407 16762299 rpoC STY3731 - COG0086K DNA-directed RNA polymerase beta' subunit 3581277-3585305 - 1342 16762300 rpoB STY3732 - COG0085K DNA-directed RNA polymerase beta subunit 3585623-3585988 - 121 16762301 rplL STY3733 - COG0222J 50S ribosomal protein L7/L12 3586055-3586552 - 165 16762302 rplJ STY3734 - COG0244J 50S ribosomal protein L10 3586968-3587672 - 234 16762303 rplA STY3735 - - 50S ribosomal protein L1 3587676-3588104 - 142 16762304 rplK STY3736 - - 50S ribosomal protein L11 3588262-3588807 - 181 16762305 nusG STY3737 - COG0250K transcription antitermination protein NusG 3589422-3590606 - 394 16762307 tuf STY3739 - COG0050J elongation factor Tu 3639438-3639650 - 70 16762339 rpmE STY3774 - COG0254J 50S ribosomal protein L31 3644950-3646281 + 443 16762344 hslU STY3779 - COG1220O ATP-dependent protease ATP-binding subunit 3654396-3655163 + 255 16762354 tpiA STY3789 - COG0149G triosephosphate isomerase 3672144-3673106 - 320 16762372 pfkA STY3809 - COG0205G 6-phosphofructokinase 3678271-3678891 - 206 16762379 sodA STY3816 - COG0605P manganese superoxide dismutase 3690386-3691534 + 382 16762388 - STY3830 - COG1454C alcohol dehydrogenase 3700591-3701493 + 300 16762397 fdoH STY3841 - COG0437C formate dehydrogenase-O beta subunit 3726120-3727943 - 607 16762424 typA STY3871 - COG1217T GTP-binding protein 3728319-3729728 + 469 16762425 glnA STY3874 - - glutamine synthetase 3753726-3754616 - 296 16762442 rbsB STY3894 - COG1879G D-ribose-binding periplasmic protein 3769916-3770155 + 79 16762456 atpE STY3908 - COG0636C ATP synthase subunit C 3771246-3772787 + 513 16762459 atpA STY3911 - COG0056C ATP synthase subunit A 3773728-3775110 + 460 16762461 atpD STY3913 - COG0055C ATP synthase subunit B 3778356-3780185 + 609 16762465 glmS STY3917 - COG0449M D-fructose-6-phosphate amidotransferase 3789843-3790883 + 346 16762472 pstS STY3926 - COG0226P periplasmic phosphate-binding protein 3793743-3794468 + 241 16762476 phoU STY3930 - COG0704P phosphate transport system regulatory protein 3802080-3803726 - 548 16762484 yidC STY3938 - COG0706U inner membrane protein translocase component YidC 3804326-3804466 - 46 16762486 rpmH STY3939A - COG0230J 50S ribosomal protein L34 3808932-3811346 + 804 16762490 gyrB STY3943 - COG0187L DNA gyrase subunit B 3830752-3831408 + 218 16762504 ccmB2 STY3960 - COG2386O heme exporter protein B2 3925835-3926071 + 78 16762581 rpmB STY4066 - COG0227J 50S ribosomal protein L28 3926092-3926259 + 55 16762582 rpmG STY4067 - COG0267J 50S ribosomal protein L33 3942888-3943820 - 310 16762600 rfaD STY4085 - COG0451MG ADP-L-Glycero-D-mannoheptose-6-epimerase 3945229-3946254 + 341 16762602 tdh STY4087 - COG1063ER L-threonine 3-dehydrogenase 3950029-3951552 - 507 16762606 - STY4091 - COG0696G phosphoglyceromutase 3970915-3972831 - 638 16762624 mtlA STY4111 - COG4668G,COG2213G mannitol-specific enzyme II of phosphotransferase system 4007030-4009099 + 689 16762654 glyS STY4144 - COG0751J glycyl-tRNA synthetase beta subunit 4012626-4012838 - 70 16762659 cspA STY4153 - - cold shock protein 4070227-4071579 - 450 16762702 gor STY4205 - COG1249C glutathione reductase 4078877-4079311 - 144 16762709 uspA STY4212 - COG0589T universal stress protein A 4133883-4134416 + 177 16762760 gntK STY4269 - COG3265G putative gluconokinase 4203490-4206033 - 847 16762811 nirB STY4322 - COG1251C nitrite reductase large subunit 4222599-4223189 + 196 16762828 slyD STY4343 - COG1047O FKBP-type peptidyl-prolyl cis-trans isomerase 4226794-4227168 + 124 16762835 rpsL STY4350 - - 30S ribosomal protein S12 4227264-4227734 + 156 16762836 rpsG STY4351 - COG0049J 30S ribosomal protein S7 4227831-4229945 + 704 16762837 fusA STY4352 - COG0480J elongation factor EF-2 4230017-4231201 + 394 16762838 tuf STY4353 - COG0050J elongation factor Tu 4232972-4233283 + 103 16762842 rpsJ STY4357 - COG0051J 30S ribosomal protein S10 4233316-4233945 + 209 16762843 rplC STY4358 - - 50S ribosomal protein L3 4233956-4234561 + 201 16762844 rplD STY4359 - - 50S ribosomal protein L4 4234558-4234860 + 100 16762845 rplW STY4360 - COG0089J 50S ribosomal protein L23 4234878-4235699 + 273 16762846 rplB STY4361 - COG0090J 50S ribosomal protein L2 4236009-4236341 + 110 16762848 rplV STY4363 - - 50S ribosomal protein L22 4236359-4237060 + 233 16762849 rpsC STY4364 - COG0092J 30S ribosomal protein S3 4237674-4237928 + 84 16762852 rpsQ STY4367 - COG0186J 30S ribosomal protein S17 4238474-4238788 + 104 16762854 rplX STY4369 - COG0198J 50S ribosomal protein L24 4239696-4240088 + 130 16762857 rpsH STY4372 - - 30S ribosomal protein S8 4241012-4241515 + 167 16762860 rpsE STY4375 - COG0098J 30S ribosomal protein S5 4241702-4242136 + 144 16762862 rplO STY4377 - COG0200J 50S ribosomal protein L15 4270729-4274412 + 1227 16762890 metH STY4405 - COG0646E,COG1410E B12-dependent methionine synthase 4285286-4286935 + 549 16762902 pgi STY4417 - COG0166G glucose-6-phosphate isomerase 4306612-4306824 + 70 16762921 - STY4436 - COG3237S hypothetical protein 4375285-4375620 - 111 16762971 phnA STY4488 - COG2824P hypothetical protein 4491144-4492208 - 354 16763090 - STY4625 - - putative major capsid protein 4547439-4548875 - 478 16763147 aspA STY4685 - COG1027E aspartate ammonia-lyase 4551268-4551561 + 97 16763151 groES STY4689 - COG0234O co-chaperonin GroES 4551605-4553251 + 548 16763152 groEL STY4690 - COG0459O chaperonin GroEL 4556104-4556670 + 188 16763156 efp STY4694 - COG0231J elongation factor P 4560475-4562265 - 596 16763165 frdA STY4703 - COG1053C fumarate reductase 4584061-4585065 + 334 16763183 hflC STY4721 - COG0330O HflC protein 4585444-4586742 + 432 16763185 purA STY4723 - - adenylosuccinate synthetase 4602981-4603631 + 216 16763203 sgaH STY4742 - COG0269G putative hexulose-6-phosphate synthase 4606057-4606452 + 131 16763208 rpsF STY4747 - COG0360J 30S ribosomal protein S6 4606778-4607005 + 75 16763210 rpsR STY4749 - - 30S ribosomal protein S18 4607047-4607496 + 149 16763211 rplI STY4750 - COG0359J 50S ribosomal protein L9 4633847-4634377 - 176 16763234 ppa STY4773 - COG0221C inorganic pyrophosphatase 4659111-4659497 - 128 16763259 yjgF STY4798 - COG0251J hypothetical protein 4673101-4675956 - 951 16763276 valS STY4814 - COG0525J valyl-tRNA synthetase 4751918-4754068 - 716 16763338 cstA STY4890 - COG1966T probable carbon starvation protein