Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700


Location	Strand	Length	PID		Gene	Synonym	Code	COG	Product

190-255	+	21	62178571	thrL	SC0001	-	-	thr operon leader peptide 
11594-13510	+	638	62178582	dnaK	SC0012	-	COG0443O	molecular chaperone DnaK 
48073-50943	+	956	62178610	ileS	SC0040	-	COG0060J	isoleucyl-tRNA synthetase 
59116-60891	-	591	62178619	oadA	SC0049	-	COG5016C,COG1038C	oxaloacetate decarboxylase 
71126-74353	+	1075	62178631	carB	SC0061	-	COG0458EF	carbamoyl-phosphate synthase large subunit 
150015-151166	+	383	62178700	ftsZ	SC0130	-	COG0206D	cell division protein FtsZ 
153022-155727	+	901	62178703	secA	SC0133	-	COG0653U	translocase 
172298-174961	+	887	62178721	aceE	SC0151	-	COG2609C	pyruvate dehydrogenase, decarboxylase component 
174976-176559	+	527	62178722	aceF	SC0152	-	COG0508C	dihydrolipoamide acetyltransferase 
176758-178185	+	475	62178723	lpdA	SC0153	-	COG1249C	dihydrolipoamide dehydrogenase 
181608-184205	+	865	62178727	acnB	SC0157	-	COG1049C	aconitate hydratase 
207137-207517	-	126	62178750	panD	SC0180	-	-	aspartate 1-decarboxylase precursor 
226764-227324	+	186	62178765	stfA	SC0195	-	COG3539NU	putative fimbrial subunit 
233324-234604	-	426	62178772	hemL	SC0202	-	COG0001H	glutamate-1-semialdehyde aminotransferase 
245402-246226	-	274	62178783	dapD	SC0213	-	COG2171E	2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 
249041-249835	-	264	62178785	map	SC0215	-	COG0024J	methionine aminopeptidase 
250286-251011	+	241	62178786	rpsB	SC0216	-	-	30S ribosomal protein S2 
251197-252120	+	307	62178787	tsf	SC0217	-	-	elongation factor Ts 
252265-252990	+	241	62178788	pyrH	SC0218	-	COG0528F	uridylate kinase 
253137-253694	+	185	62178789	frr	SC0219	-	-	ribosome releasing factor 
278453-280096	-	547	62178811	proS	SC0241	-	COG0442J	prolyl-tRNA synthetase 
281509-282324	-	271	62178814	yaeC	SC0244	-	COG1464P	putative outer membrane lipoprotein 
502565-503167	-	200	62179014	tsaA	SC0444	-	COG0450O	putative thiol - alkyl hydroperoxide reductase 
506463-506795	+	110	62179018	yajC	SC0448	-	COG1862U	preprotein translocase subunit YajC 
532231-532722	+	163	62179046	yajQ	SC0476	-	-	hypothetical protein 
546022-547320	+	432	62179059	tig	SC0489	-	COG0544O	trigger factor 
548443-549714	+	423	62179061	clpX	SC0491	-	COG1219O	ATP-dependent protease ATP-binding subunit 
587238-587567	+	109	62179096	ybaB	SC0526	-	COG0718S	hypothetical protein 
588259-590157	+	632	62179098	htpG	SC0528	-	COG0326O	heat shock protein 90 
590399-591043	+	214	62179099	adk	SC0529	-	COG0563F	adenylate kinase 
642818-643312	-	164	62179145	ppiB	SC0575	-	COG0652O	peptidyl-prolyl cis-trans isomerase B (rotamase B) 
712997-713560	+	187	62179209	ahpC	SC0639	-	COG0450O	alkyl hydroperoxide reductase, C22 subunit; detoxification of hydroperoxides 
726380-727909	-	509	62179220	citF	SC0650	-	COG3051C	citrate lyase alpha chain/citrate-ACP transferase 
751672-754347	-	891	62179248	leuS	SC0678	-	COG0495J	leucyl-tRNA synthetase 
780825-782489	-	554	62179271	asnB	SC0701	-	COG0367E	asparagine synthetase B 
789307-790974	+	555	62179277	glnS	SC0707	-	COG0008J	glutaminyl-tRNA synthetase 
791426-792832	+	468	62179278	ybfM	SC0708	-	-	putative outer membrane protein 
827922-829688	+	588	62179308	sdhA	SC0738	-	COG1053C	succinate dehydrogenase catalytic subunit 
833763-834971	+	402	62179311	sucB	SC0741	-	COG0508C	dihydrolipoamide acetyltransferase 
835113-836279	+	388	62179312	sucC	SC0742	-	COG0045C	succinyl-CoA synthetase subunit beta 
836279-837148	+	289	62179313	sucD	SC0743	-	COG0074C	succinyl-CoA synthetase alpha subunit 
846305-846829	+	174	62179323	pal	SC0753	-	COG2885M	tol protein required for outer membrane integrity, uptake of group A colicins, and translocation of phage DNA to cytoplasm 
858769-860544	+	591	62179335	oadA	SC0765	-	COG1038C,COG5016C	oxaloacetate decarboxylase 
865001-865753	-	250	62179340	gpmA	SC0770	-	COG0588G	phosphoglyceromutase 
928127-928642	+	171	62179399	ompX	SC0829	-	COG3637M	outer membrane protein X 
997985-999637	-	550	62179462	hcp	SC0892	-	-	hydroxylamine reductase 
1039049-1041331	-	760	62179497	pflB	SC0927	-	COG1882C	pyruvate formate lyase I, induced anaerobically 
1049737-1051410	+	557	62179505	rpsA	SC0935	-	COG0539J	30S ribosomal protein S1 
1075051-1076148	-	365	62179526	ompF	SC0956	-	COG3203M	outer membrane protein 1a (ia;b;f), porin 
1141579-1142631	-	350	62179592	ompA	SC1022	-	COG2885M	putative hydrogenase, membrane component 
1168931-1170397	+	488	62179622	hpaE	SC1052	-	COG1012C	4-hydroxyphenylacetate catabolism 
1255904-1256077	+	57	62179709	-	SC1139	-	COG0333J	50S ribosomal protein L32 
1260171-1260407	+	78	62179714	acp	SC1144	-	COG0236IQ	acyl carrier protein 
1267742-1269175	+	477	62179723	ptsG	SC1153	-	COG1263G	Sugar Specific PTS family, glucose-specific IIBCcomponent 
1305665-1306915	+	416	62179759	icdA	SC1189	-	COG0538C	isocitrate dehydrogenase 
1400314-1401318	-	334	62179873	gapA	SC1303	-	COG0057G	glyceraldehyde-3-phosphate dehydrogenase 
1450863-1451075	+	70	62179924	rpmI	SC1354	-	COG0291J	50S ribosomal protein L35 
1451126-1451482	+	118	62179925	rplT	SC1355	-	-	50S ribosomal protein L20 
1497123-1497359	-	78	62179968	lpp	SC1398	-	-	murein lipoprotein, links outer and inner membranes 
1497670-1499082	-	470	62179969	pykF	SC1399	-	-	pyruvate kinase 
1587835-1588968	-	377	62180060	ompN	SC1490	-	COG3203M	outer membrane protein N, non-specific porin 
1611948-1612370	-	140	62180084	dmsB	SC1514	-	COG0437C	anaerobic dimethyl sulfoxide reductase, subunit B 
1668993-1670081	+	362	62180142	nmpC	SC1572	-	COG3203M	new outer membrane protein; predicted bacterial porin 
1856254-1858932	+	892	62180314	adhE	SC1744	-	COG1012C,COG1454C	iron-dependent alcohol dehydrogenase of the multifunctional alcohol dehydrogenase AdhE 
1869861-1871396	-	511	62180327	narH	SC1757	-	COG1140C	nitrate reductase 1, FeS (beta) subunit 
1883387-1884241	-	284	62180336	kdsA	SC1766	-	COG2877M	2-dehydro-3-deoxyphosphooctonate aldolase 
1944730-1945530	+	266	62180395	manY	SC1825	-	-	Sugar Specific PTS family, mannose-specific enzyme IIC 
1950723-1950932	-	69	62180401	cspC	SC1831	-	-	Cold shock-like protein cspC 
2016367-2017107	-	246	62180477	yebC	SC1907	-	-	hypothetical protein 
2017692-2019464	-	590	62180479	aspS	SC1909	-	COG0173J	aspartyl-tRNA synthetase 
2099330-2100523	+	397	62180568	ompS	SC1998	-	COG3203M	putative porin 
2112201-2112305	-	34	62180584	yajQ	SC2014	-	-	hypothetical protein 
2139697-2141361	+	554	62180618	pduC	SC2048	-	-	Propanediol utilization: dehydratase, large subunit 
2154942-2155277	-	111	62180638	yeeX	SC2068	-	-	hypothetical protein 
2205077-2206198	-	373	62180680	gmd	SC2110	-	COG1089M	GDP-D-mannose dehydratase in colanic acid gene cluster 
2350283-2350567	+	94	62180811	rplY	SC2241	-	COG1825J	50S ribosomal protein L25 
2366673-2367332	-	219	62180828	ccmB	SC2258	-	COG2386O	ABC superfamily (membrane) heme exporter protein, cytochrome c-type biogenesis protein 
2379727-2380863	-	378	62180841	ompC	SC2271	-	COG3203M	outer membrane protein 1b (ib;c), porin 
2387994-2390630	-	878	62180845	gyrA	SC2275	-	COG0188L	DNA gyrase subunit A 
2395682-2397967	+	761	62180850	nrdA	SC2280	-	COG0209F	ribonucleotide-diphosphate reductase alpha subunit 
2398080-2399210	+	376	62180851	nrdB	SC2281	-	COG0208F	ribonucleotide-diphosphate reductase beta subunit 
2428278-2429135	-	285	62180877	menB	SC2307	-	COG0447H	naphthoate synthase 
2446290-2449022	-	910	62180893	nuoG	SC2323	-	COG1034C	NADH dehydrogenase gamma subunit 
2449047-2450384	-	445	62180894	nuoF	SC2324	-	COG1894C	NADH dehydrogenase I chain F 
2462350-2463552	+	400	62180908	ackA	SC2338	-	COG0282C	acetate/propionate kinase 
2463629-2465773	+	714	62180909	pta	SC2339	-	COG0857R,COG0280C	phosphate acetyltransferase 
2503032-2504246	-	404	62180950	fabB	SC2380	-	COG0304IQ	3-oxoacyl-(acyl carrier protein) synthase 
2545890-2547305	-	471	62180986	gltX	SC2416	-	COG0008J	glutamyl-tRNA synthetase 
2560336-2560593	+	85	62180999	pthP	SC2429	-	COG1925G	Phosphocarrier protein HPr 
2562410-2562919	+	169	62181001	crr	SC2431	-	-	glucose-specific PTS system enzyme IIA component 
2589814-2590104	-	96	62181031	eutM	SC2461	-	COG4577QC	putative detox protein in ethanolamine utilization 
2629329-2629955	-	208	62181065	upp	SC2495	-	COG0035F	uracil phosphoribosyltransferase 
2643546-2645123	-	525	62181078	guaA	SC2508	-	COG0518F,COG0519F	bifunctional GMP synthase/glutamine amidotransferase protein 
2701730-2702116	-	128	62181106	nifU	SC2536	-	COG0822C	NifU homologs involved in Fe-S cluster formation 
2702144-2703358	-	404	62181107	nifS	SC2537	-	COG1104E	cysteine desulfurase 
2705042-2705845	+	267	62181110	suhB	SC2540	-	COG0483G	inositol monophosphatase 
2714288-2715541	-	417	62181119	glyA	SC2549	-	COG0112E	serine hydroxymethyltransferase 
2724266-2724604	-	112	62181126	glnB	SC2556	-	COG0347E	Nitrogen regulatory protein P-II 1 
2803129-2803512	-	127	62181221	yfiD	SC2651	-	COG3445R	putative formate acetyltransferase 
2832110-2832457	-	115	62181244	rplS	SC2674	-	-	50S ribosomal protein L19 
2929266-2930327	-	353	62181332	recA	SC2762	-	COG0468L	recombinase A 
2947757-2948299	-	180	62181351	hycF	SC2781	-	COG1143C	hydrogenase 4 Fe-S subunit 
2948309-2950018	-	569	62181352	hycE	SC2782	-	COG3262C,COG3261C	Formate hydrogenlyase subunit 5 precursor 
3050802-3052100	-	432	62181456	eno	SC2886	-	COG0148G	phosphopyruvate hydratase 
3080478-3081767	+	429	62181479	sdaC	SC2909	-	COG0814E	putative HAAAP family, serine transport protein 
3157391-3158908	-	505	62181550	lysS	SC2980	-	COG1190J	lysyl-tRNA synthetase 
3173344-3173733	-	129	62181565	gcvH	SC2995	-	COG0509E	glycine cleavage system protein H 
3187689-3188843	-	384	62181580	fba	SC3010	-	COG0191G	fructose-bisphosphate aldolase 
3188870-3190033	-	387	62181581	pgk	SC3011	-	-	phosphoglycerate kinase 
3194571-3196562	-	663	62181588	tktA	SC3018	-	COG0021G	transketolase 
3197697-3198617	-	306	62181590	speB	SC3020	-	COG0010E	agmatinase 
3211182-3212336	+	384	62181600	metK	SC3030	-	COG0192H	S-adenosylmethionine synthetase 
3301016-3301408	-	130	62181690	ygiW	SC3120	-	-	putative outer membrane protein 
3336129-3336344	+	71	62181726	RS21	SC3156	-	COG0828J	30S ribosomal protein S21 
3402212-3404167	-	651	62181791	deaD	SC3221	-	COG0513LKJ	cysteine sulfinate desulfinase 
3405274-3407439	-	721	62181793	pnp	SC3223	-	COG1185J	polynucleotide phosphorylase, member of mRNA degradosome 
3407651-3407920	-	89	62181794	rpsO	SC3224	-	-	30S ribosomal protein S15 
3409015-3409416	-	133	62181796	rbfA	SC3226	-	COG0858J	ribosome-binding factor A 
3409637-3412315	-	892	62181797	infB	SC3227	-	COG0532J	translation initiation factor IF-2 
3412340-3413842	-	500	62181798	nusA	SC3228	-	COG0195K	transcription elongation factor NusA 
3419430-3421373	-	647	62181804	ftsH	SC3234	-	COG0465O	ATP-dependent zinc-metallo protease 
3424958-3426130	-	390	62181809	yhbZ	SC3239	-	COG0536R	putative GTP-binding protein 
3427241-3427498	-	85	62181811	rpmA	SC3241	-	-	50S ribosomal protein L27 
3449265-3453725	+	1486	62181838	gltB	SC3268	-	COG0067E,COG0069E,COG0070E	glutamate synthase, large subunit 
3467147-3467539	-	130	62181852	rpsI	SC3282	-	-	30S ribosomal protein S9 
3467555-3467998	-	147	62181853	rplM	SC3283	-	-	50S ribosomal protein L13 
3474787-3476562	-	591	62181860	oadA	SC3290	-	COG5016C,COG1038C	oxaloacetate decarboxylase 
3505310-3506659	+	449	62181888	accC	SC3318	-	COG0439I	acetyl-CoA carboxylase 
3541809-3542243	-	144	62181925	RL15	SC3355	-	COG0200J	50S ribosomal protein L15 
3542430-3542933	-	167	62181927	rpsE	SC3357	-	COG0098J	30S ribosomal protein S5 
3543857-3544249	-	130	62181930	rpsH	SC3360	-	-	30S ribosomal protein S8 
3545157-3545471	-	104	62181933	rplX	SC3363	-	COG0198J	50S ribosomal protein L24 
3546017-3546271	-	84	62181935	rpsQ	SC3365	-	COG0186J	30S ribosomal protein S17 
3546885-3547586	-	233	62181938	rpsC	SC3368	-	COG0092J	30S ribosomal protein S3 
3548246-3549067	-	273	62181941	rplB	SC3371	-	COG0090J	50S ribosomal protein L2 
3549085-3549387	-	100	62181942	rplW	SC3372	-	COG0089J	50S ribosomal protein L23 
3549384-3549989	-	201	62181943	rplD	SC3373	-	-	50S ribosomal protein L4 
3550000-3550629	-	209	62181944	rplC	SC3374	-	-	50S ribosomal protein L3 
3550662-3550973	-	103	62181945	rpsJ	SC3375	-	COG0051J	30S ribosomal protein S10 
3552745-3553974	-	409	62181949	tuf	SC3379	-	COG0050J	elongation factor Tu 
3554001-3556115	-	704	62181950	fusA	SC3380	-	COG0480J	elongation factor EF-2 
3556212-3556682	-	156	62181951	rpsG	SC3381	-	COG0049J	30S ribosomal protein S7 
3560765-3561355	-	196	62181959	slyD	SC3389	-	COG1047O	FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) 
3577953-3580496	+	847	62181978	nirB	SC3408	-	COG1251C	nitrite reductase, large subunit 
3610057-3611676	+	539	62182002	pckA	SC3432	-	COG1866C	phosphoenolpyruvate carboxykinase 
3664799-3665293	-	164	62182042	gntK	SC3472	-	COG3265G	gluconate kinase 2 in GNT I system, thermoresistant 
3714983-3715417	+	144	62182090	uspA	SC3520	-	COG0589T	universal stress protein A 
3722724-3724076	+	450	62182096	gor	SC3526	-	COG1249C	glutathione reductase 
3765217-3766824	-	535	62182131	dppA	SC3561	-	COG0747E	ABC superfamily (peri_perm), dipeptide transport protein 
3778230-3778766	-	178	62182141	lpfA	SC3571	-	COG3539NU	long polar fimbria 
3787219-3787431	+	70	62182151	cspA	SC3581	-	-	Cold shock protein cspA (CSP-A) 
3793408-3795477	-	689	62182160	glyS	SC3590	-	COG0751J	glycyl-tRNA synthetase beta subunit 
3795487-3796398	-	303	62182161	glyQ	SC3591	-	-	glycyl-tRNA synthetase alpha subunit 
3817816-3819732	+	638	62182179	mtlA	SC3609	-	COG4668G,COG2213G	PTS family, mannitol-specific enzyme IIABC components 
3838539-3839006	-	155	62182194	secB	SC3624	-	COG1952U	export protein SecB 
3840066-3841610	+	514	62182197	pmgI	SC3627	-	COG0696G	phosphoglyceromutase 
3845183-3846208	-	341	62182201	tdh	SC3631	-	COG1063ER	L-threonine 3-dehydrogenase 
3847617-3848549	+	310	62182203	rfaD	SC3633	-	COG0451MG	ADP-L-glycero-D-mannoheptose-6-epimerase 
3864338-3864505	-	55	62182220	rpmG	SC3650	-	COG0267J	50S ribosomal protein L33 
3864526-3864762	-	78	62182221	rpmB	SC3651	-	COG0227J	50S ribosomal protein L28 
3950883-3951296	-	137	62182302	ibpA	SC3732	-	COG0071O	small heat shock protein 
3977848-3980262	-	804	62182323	gyrB	SC3753	-	COG0187L	DNA gyrase subunit B 
3984678-3984818	+	46	62182327	RL34	SC3757	-	COG0230J	50S ribosomal protein L34 
3985417-3987063	+	548	62182329	yidC	SC3759	-	COG0706U	inner membrane protein translocase component YidC 
3995080-3995805	-	241	62182337	phoU	SC3767	-	COG0704P	regulatory gene for high affinity phosphate uptake 
3998665-3999705	-	346	62182341	pstS	SC3771	-	COG0226P	ABC superfamily (bind_prot), high-affinity phosphate transporter 
4004093-4005922	-	609	62182344	glmS	SC3774	-	COG0449M	D-fructose-6-phosphate amidotransferase 
4009167-4010549	-	460	62182347	atpD	SC3777	-	COG0055C	ATP synthase subunit B 
4011490-4013031	-	513	62182349	atpA	SC3779	-	COG0056C	ATP synthase subunit A 
4014122-4014361	-	79	62182352	atpL	SC3782	-	COG0636C	ATP synthase subunit C 
4052506-4053981	+	491	62182384	ilvC	SC3814	-	COG0059EH	ketol-acid reductoisomerase 
4149675-4151084	-	469	62182469	glnA	SC3899	-	-	glutamine synthetase 
4151460-4153283	+	607	62182470	typA	SC3900	-	COG1217T	GTP-binding elongation factor family protein 
4176888-4177790	-	300	62182496	fdoH	SC3926	-	COG0437C	formate dehydrogenase-O, Fe-S subunit 
4199582-4200202	+	206	62182516	sodA	SC3946	-	COG0605P	superoxide dismutase, manganese 
4205372-4206334	+	320	62182523	pfkA	SC3953	-	COG0205G	6-phosphofructokinase 
4223305-4224072	-	255	62182540	tpiA	SC3970	-	COG0149G	triosephosphate isomerase 
4232189-4233520	-	443	62182550	hslU	SC3980	-	COG1220O	ATP-dependent protease ATP-binding subunit 
4294620-4295804	+	394	62182600	tuf	SC4030	-	COG0050J	elongation factor Tu 
4296419-4296964	+	181	62182602	nusG	SC4032	-	COG0250K	transcription antitermination protein NusG 
4297122-4297550	+	142	62182603	rplK	SC4033	-	-	50S ribosomal protein L11 
4297554-4298258	+	234	62182604	rplA	SC4034	-	-	50S ribosomal protein L1 
4298678-4299175	+	165	62182605	rplJ	SC4035	-	COG0244J	50S ribosomal protein L10 
4299284-4299607	+	107	62182606	rplL	SC4036	-	COG0222J	50S ribosomal protein L7/L12 
4299811-4303953	+	1380	62182607	rpoB	SC4037	-	COG0085K	DNA-directed RNA polymerase beta subunit 
4304030-4308253	+	1407	62182608	rpoC	SC4038	-	COG0086K	DNA-directed RNA polymerase beta' subunit 
4320284-4320556	+	90	62182621	hupA	SC4051	-	-	DNA-binding protein HU-alpha (HU-2) 
4324776-4326026	-	416	62182626	purD	SC4056	-	COG0151F	phosphoribosylamine--glycine ligase 
4341607-4345377	+	1256	62182637	metH	SC4067	-	COG0646E,COG1410E	B12-dependent methionine synthase 
4374778-4376427	+	549	62182670	pgi	SC4100	-	COG0166G	glucose-6-phosphate isomerase 
4396106-4396318	+	70	62182689	yjbJ	SC4119	-	COG3237S	putative cytoplasmic protein 
4464711-4465046	-	111	62182738	phnA	SC4168	-	COG2824P	putative alkylphosphonate uptake protein in phosphonate metabolism 
4505646-4507082	-	478	62182774	aspA	SC4204	-	COG1027E	aspartate ammonia-lyase (aspartase) 
4509812-4511458	+	548	62182779	groEL	SC4209	-	COG0459O	chaperonin GroEL 
4517955-4518689	-	244	62182791	frdB	SC4221	-	COG0479C	succinate dehydrogenase 
4542414-4543418	+	334	62182810	hflC	SC4240	-	COG0330O	HflC, with HflK, part of modulator for protease specific for FtsH phage lambda cII repressor 
4543797-4545095	+	432	62182812	purA	SC4242	-	-	adenylosuccinate synthetase 
4561338-4561643	+	101	62182828	sgaB	SC4258	-	COG3414G	putative PTS enzyme IIsga subunit 
4562092-4562781	+	229	62182830	sgaH	SC4260	-	COG0269G	putative hexulose phosphate synthase (arabino hexulose phosphate formaldehyde lyase) 
4565206-4565601	+	131	62182835	rpsF	SC4265	-	COG0360J	30S ribosomal protein S6 
4565927-4566154	+	75	62182837	rpsR	SC4267	-	-	30S ribosomal protein S18 
4566196-4566645	+	149	62182838	rplI	SC4268	-	COG0359J	50S ribosomal protein L9 
4592259-4592789	-	176	62182858	ppa	SC4288	-	COG0221C	inorganic pyrophosphatase 
4598790-4599152	+	120	62182866	-	SC4296	-	-	putative cytoplasmic protein 
4607159-4609297	-	712	62182877	nrdD	SC4307	-	COG1328F	anaerobic ribonucleoside triphosphate reductase 
4616986-4617372	-	128	62182883	yjgF	SC4313	-	COG0251J	putative translation initiation inhibitor 
4630966-4633821	-	951	62182901	valS	SC4331	-	COG0525J	valyl-tRNA synthetase