Shewanella sp. W3-18-1, complete genome - 1..4708380 Location Strand Length PID Gene Synonym Code COG Product 15911-17074 - 387 120596845 - Sputw3181_0012 - - acetyl-CoA C-acyltransferase FadA 17097-19247 - 716 120596846 - Sputw3181_0013 - - fatty oxidation complex, alpha subunit FadB 61938-62243 - 101 120596881 - Sputw3181_0048 - - Rhodanese domain protein 62354-63379 - 341 120596882 - Sputw3181_0049 - - L-threonine 3-dehydrogenase 146468-147046 + 192 120596952 - Sputw3181_0119 - - HesB/YadR/YfhF-family protein 172061-173245 + 394 120596975 - Sputw3181_0142 - - translation elongation factor Tu 173902-174453 + 183 120596977 - Sputw3181_0144 - - NusG antitermination factor 174581-175009 + 142 120596978 - Sputw3181_0145 - - ribosomal protein L11 175014-175715 + 233 120596979 - Sputw3181_0146 - - ribosomal protein L1 175982-176482 + 166 120596980 - Sputw3181_0147 - - ribosomal protein L10 176537-176905 + 122 120596981 - Sputw3181_0148 - - ribosomal protein L7/L12 177146-181177 + 1343 120596982 - Sputw3181_0149 - - DNA-directed RNA polymerase, beta subunit 181261-185478 + 1405 120596983 - Sputw3181_0150 - - DNA-directed RNA polymerase, beta' subunit 185658-186032 + 124 120596984 - Sputw3181_0151 - - ribosomal protein S12 186113-186583 + 156 120596985 - Sputw3181_0152 - - ribosomal protein S7 188777-190015 + 412 120596987 - Sputw3181_0154 - - translation elongation factor Tu 190689-191327 + 212 120596989 - Sputw3181_0156 - - ribosomal protein L3 191345-191950 + 201 120596990 - Sputw3181_0157 - - ribosomal protein L4/L1e 191947-192252 + 101 120596991 - Sputw3181_0158 - - Ribosomal protein L25/L23 192269-193093 + 274 120596992 - Sputw3181_0159 - - ribosomal protein L2 193744-194436 + 230 120596995 - Sputw3181_0162 - - ribosomal protein S3 195049-195297 + 82 120596998 - Sputw3181_0165 - - ribosomal protein S17 195856-196170 + 104 120597000 - Sputw3181_0167 - - ribosomal protein L24 196183-196722 + 179 120597001 - Sputw3181_0168 - - ribosomal protein L5 196733-197038 + 101 120597002 - Sputw3181_0169 - - ribosomal protein S14 197063-197455 + 130 120597003 - Sputw3181_0170 - - ribosomal protein S8 198010-198360 + 116 120597005 - Sputw3181_0172 - - ribosomal protein L18 198373-198876 + 167 120597006 - Sputw3181_0173 - - ribosomal protein S5 198883-199065 + 60 120597007 - Sputw3181_0174 - - ribosomal protein L30 199069-199503 + 144 120597008 - Sputw3181_0175 - - ribosomal protein L15 201475-201867 + 130 120597012 - Sputw3181_0179 - - ribosomal protein S11 201900-202520 + 206 120597013 - Sputw3181_0180 - - ribosomal protein S4 203575-203970 + 131 120597015 - Sputw3181_0182 - - ribosomal protein L17 207742-208041 + 99 120597021 - Sputw3181_0189 - - cytochrome c, class I 288882-290291 - 469 120597097 - Sputw3181_0266 - - glutamine synthetase, type I 291326-293137 + 603 120597098 - Sputw3181_0267 - - GTP-binding protein TypA 302970-303566 + 198 120597108 - Sputw3181_0277 - - (Acyl-carrier-protein) phosphodiesterase 308648-308890 - 80 120597114 - Sputw3181_0283 - - prevent-host-death family protein 365401-365637 + 78 120597170 - Sputw3181_0339 - - ribosomal protein L28 365644-365817 + 57 120597171 - Sputw3181_0340 - - ribosomal protein L33 426695-427882 + 395 120597225 - Sputw3181_0394 - - cell division protein FtsZ 430429-433158 + 909 120597229 - Sputw3181_0398 - - preprotein translocase, SecA subunit 524280-525083 + 267 120597314 - Sputw3181_0483 - - flagellin domain protein 525321-526133 + 270 120597315 - Sputw3181_0484 - - flagellin domain protein 533557-533862 - 101 120597326 - Sputw3181_0495 - - transcriptional regulator, Fis family 544704-545030 - 108 120597337 - Sputw3181_0506 - - thioredoxin 564822-567488 + 888 120597357 - Sputw3181_0526 - - 2-oxo-acid dehydrogenase E1 subunit, homodimeric type 567501-569510 + 669 120597358 - Sputw3181_0527 - - pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 569658-571085 + 475 120597359 - Sputw3181_0528 - - dihydrolipoamide dehydrogenase 578191-580233 + 680 120597362 - Sputw3181_0531 - - Endothelin-converting enzyme 1 581752-584349 + 865 120597365 - Sputw3181_0534 - - Aconitate hydratase 585371-586435 + 354 120597368 - Sputw3181_0537 - - uroporphyrinogen decarboxylase 652747-652953 + 68 120597427 - Sputw3181_0596 - - hypothetical protein 675331-675603 - 90 120597447 - Sputw3181_0616 - - histone family protein DNA-binding protein 733792-735006 + 404 120597497 - Sputw3181_0666 - - Cytochrome b/b6, N-terminal domain 801499-802434 + 311 120597553 - Sputw3181_0722 - - malate dehydrogenase, NAD-dependent 810044-810433 + 129 120597562 - Sputw3181_0731 - - glycine cleavage system H protein 810556-813444 + 962 120597563 - Sputw3181_0732 - - glycine dehydrogenase 846180-846482 + 100 120597592 - Sputw3181_0761 - - hypothetical protein 885680-887773 + 697 120597620 - Sputw3181_0789 - - translation elongation factor G 888869-889021 + 50 120597622 - Sputw3181_0791 - - hypothetical protein 912094-913584 - 496 120597638 - Sputw3181_0807 - - Curlin associated repeat protein 1021858-1023360 + 500 120597726 - Sputw3181_0896 - - lysyl-tRNA synthetase 1023471-1023710 - 79 120597727 - Sputw3181_0897 - - hypothetical protein 1064032-1064637 - 201 120597764 - Sputw3181_0934 - - membrane lipoprotein lipid attachment site 1108464-1110383 + 639 120597806 - Sputw3181_0976 - - chaperone protein DnaK 1142695-1143312 + 205 120597830 - Sputw3181_1000 - - peptidylprolyl isomerase, FKBP-type 1145559-1148783 + 1074 120597833 - Sputw3181_1003 - - carbamoyl-phosphate synthase, large subunit 1196025-1197116 + 363 120597882 - Sputw3181_1052 - - GTP-binding protein YchF 1215371-1218013 + 880 120597900 - Sputw3181_1070 - - translation initiation factor IF-2 1219611-1219880 + 89 120597903 - Sputw3181_1073 - - ribosomal protein S15 1222201-1224300 + 699 120597905 - Sputw3181_1075 - - Polyribonucleotide nucleotidyltransferase 1336902-1338161 + 419 120598010 - Sputw3181_1187 - - nucleoside transporter 1338521-1339378 + 285 120598011 - Sputw3181_1188 - - nucleoside-specific channel-forming protein, Tsx 1339785-1340555 + 256 120598012 - Sputw3181_1189 - - deoxyribose-phosphate aldolase 1343387-1344097 + 236 120598015 - Sputw3181_1192 - - purine nucleoside phosphorylase 1372708-1373964 - 418 120598038 - Sputw3181_1215 - - Adenylosuccinate synthase 1394885-1396138 + 417 120598055 - Sputw3181_1232 - - Glycine hydroxymethyltransferase 1426549-1428186 + 545 120598077 - Sputw3181_1254 - - CTP synthase 1428392-1429687 + 431 120598078 - Sputw3181_1255 - - Phosphopyruvate hydratase 1438954-1440027 + 357 120598088 - Sputw3181_1265 - - recA protein 1440802-1443480 + 892 120598090 - Sputw3181_1267 - - alanyl-tRNA synthetase 1444865-1445062 + 65 120598092 - Sputw3181_1269 - - carbon storage regulator, CsrA 1452687-1453136 - 149 120598097 - Sputw3181_1274 - - cytochrome c, class II 1453747-1454403 - 218 120598099 - Sputw3181_1276 - - peptidylprolyl isomerase, FKBP-type 1470346-1471068 - 240 120598111 - Sputw3181_1288 - - protein of unknown function DUF28 1493142-1493717 + 191 120598132 - Sputw3181_1309 - - YceI family protein 1493805-1494083 - 92 120598133 - Sputw3181_1310 - - Fe(II) trafficking protein YggX 1496140-1496466 + 108 120598136 - Sputw3181_1313 - - protein of unknown function DUF469 1515790-1516617 - 275 120598159 - Sputw3181_1336 - - MscS Mechanosensitive ion channel 1524334-1524636 + 100 120598167 - Sputw3181_1344 - - NrfJ-related protein 1541929-1543395 + 488 120598184 - Sputw3181_1361 - - inosine-5'-monophosphate dehydrogenase 1553046-1554602 + 518 120598189 - Sputw3181_1366 - - cytochrome bd ubiquinol oxidase, subunit I 1554618-1555757 + 379 120598190 - Sputw3181_1367 - - cytochrome d ubiquinol oxidase, subunit II 1605697-1606512 + 271 120598241 - Sputw3181_1418 - - flagellin domain protein 1679565-1679816 - 83 120598306 - Sputw3181_1488 - - hypothetical protein 1690078-1690470 - 130 120598314 - Sputw3181_1496 - - histone family protein nucleoid-structuring protein H-NS 1696826-1698928 - 700 120598319 - Sputw3181_1501 - - hypothetical protein 1762390-1763010 - 206 120598369 - Sputw3181_1551 - - hypothetical protein 1780012-1781247 + 411 120598381 - Sputw3181_1563 - - beta-ketoacyl synthase 1857274-1858476 - 400 120598445 - Sputw3181_1628 - - acetate kinase 1859909-1862191 - 760 120598448 - Sputw3181_1631 - - formate acetyltransferase 1875935-1876903 - 322 120598456 - Sputw3181_1639 - - cysteine synthase A 1905614-1905874 - 86 120598474 - Sputw3181_1657 - - Glutaredoxin, GrxA family 1942549-1942731 - 60 120598501 - Sputw3181_1684 - - hypothetical protein 1948099-1948458 - 119 120598508 - Sputw3181_1691 - - hypothetical protein 1950091-1950582 + 163 120598510 - Sputw3181_1693 - - peptidylprolyl isomerase, FKBP-type 1954264-1955982 + 572 120598514 - Sputw3181_1697 - - 5'-nucleotidase 1957976-1958386 + 136 120598517 - Sputw3181_1700 - - hypothetical protein 1960263-1960385 + 40 120598520 - Sputw3181_1703 - - hypothetical protein 1969181-1969825 + 214 120598528 - Sputw3181_1711 - - adenylate kinase 1999285-2001051 + 588 120598554 - Sputw3181_1737 - - succinate dehydrogenase, flavoprotein subunit 2004837-2006039 + 400 120598557 - Sputw3181_1740 - - 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 2006116-2007282 + 388 120598558 - Sputw3181_1741 - - succinyl-CoA synthetase, beta subunit 2007282-2008154 + 290 120598559 - Sputw3181_1742 - - succinyl-CoA synthetase, alpha subunit 2032326-2034695 + 789 120598582 - Sputw3181_1765 - - phosphoenolpyruvate synthase 2044398-2045768 - 456 120598591 - Sputw3181_1774 - - adenylosuccinate lyase 2123674-2123889 - 71 120598659 - Sputw3181_1844 - - hypothetical protein 2142318-2143121 - 267 120598673 - Sputw3181_1858 - - Inositol-phosphate phosphatase 2145751-2146965 + 404 120598677 - Sputw3181_1862 - - cysteine desulfurase IscS 2151679-2151876 + 65 120598684 - Sputw3181_1869 - - protein of unknown function DUF528 2152472-2152903 + 143 120598685 - Sputw3181_1870 - - Nucleoside-diphosphate kinase 2153141-2153584 + 147 120598686 - Sputw3181_1871 - - heat shock protein Hsp20 2164077-2164283 - 68 120598695 - Sputw3181_1880 - - hypothetical protein 2285586-2287253 + 555 120598785 - Sputw3181_1971 - - ribosomal protein S1 2313143-2313499 + 118 120598811 - Sputw3181_1997 - - ribosomal protein L20 2323510-2323632 + 40 120598820 - Sputw3181_2006 - - hypothetical protein 2358204-2358830 + 208 120598856 - Sputw3181_2047 - - cytochrome c oxidase, cbb3-type, subunit II 2359018-2359986 + 322 120598858 - Sputw3181_2049 - - cytochrome c oxidase, cbb3-type, subunit III 2375983-2378235 - 750 120598876 - Sputw3181_2068 - - TonB-dependent receptor, plug 2434439-2434726 - 95 120598921 - Sputw3181_2113 - - ribosomal protein L25 2438651-2440084 - 477 120598925 - Sputw3181_2117 - - glyceraldehyde-3-phosphate dehydrogenase, type I 2441382-2442392 + 336 120598927 - Sputw3181_2119 - - glyceraldehyde-3-phosphate dehydrogenase, type I 2453580-2454107 + 175 120598939 - Sputw3181_2131 - - flavodoxin 2455440-2456000 + 186 120598941 - Sputw3181_2133 - - translation elongation factor P 2565467-2567011 - 514 120599023 - Sputw3181_2218 - - hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit 2569662-2571062 + 466 120599027 - Sputw3181_2222 - - asparaginyl-tRNA synthetase 2692695-2693279 + 194 120599142 - Sputw3181_2338 - - Superoxide dismutase 2716213-2717253 + 346 120599159 - Sputw3181_2355 - - 4-hydroxyphenylpyruvate dioxygenase 2786531-2787067 - 178 120599218 - Sputw3181_2414 - - OmpA domain protein 2795635-2796240 - 201 120599227 - Sputw3181_2423 - - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2798072-2798698 - 208 120599229 - Sputw3181_2425 - - uracil phosphoribosyltransferase 2799031-2800068 + 345 120599230 - Sputw3181_2426 - - phosphoribosylformylglycinamidine cyclo-ligase 2804071-2805735 + 554 120599234 - Sputw3181_2430 - - asparagine synthase (glutamine-hydrolyzing) 2816645-2816878 - 77 120599243 - Sputw3181_2439 - - acyl carrier protein 2820826-2820996 - 56 120599248 - Sputw3181_2444 - - ribosomal protein L32 2828884-2829093 - 69 120599254 - Sputw3181_2450 - - putative cold-shock DNA-binding domain protein 2854716-2855015 - 99 120599282 - Sputw3181_2478 - - hypothetical protein 2855112-2856302 - 396 120599283 - Sputw3181_2479 - - phage major capsid protein, HK97 family 2932010-2932399 - 129 120599376 - Sputw3181_2572 - - protein of unknown function DUF1260 2932422-2932661 - 79 120599377 - Sputw3181_2573 - - RNA-binding S4 domain protein 2939177-2940532 - 451 120599386 - Sputw3181_2582 - - MotA/TolQ/ExbB proton channel 2945370-2946578 - 402 120599389 - Sputw3181_2585 - - porin, Gram-negative type 2960097-2960780 - 227 120599402 - Sputw3181_2599 - - phage shock protein A, PspA 2971414-2971686 - 90 120599411 - Sputw3181_2608 - - histone family protein DNA-binding protein 2976500-2977804 - 434 120599415 - Sputw3181_2612 - - trigger factor 2981341-2981835 + 164 120599418 - Sputw3181_2615 - - peptidyl-prolyl cis-trans isomerase, cyclophilin type 2992502-2994466 + 654 120599426 - Sputw3181_2623 - - decaheme cytochrome c 3079998-3081497 - 499 120599502 - Sputw3181_2703 - - methylmalonate-semialdehyde dehydrogenase 3087395-3088054 - 219 120599508 - Sputw3181_2709 - - OmpW family protein 3094555-3095463 + 302 120599515 - Sputw3181_2716 - - UTP-glucose-1-phosphate uridylyltransferase GalU 3126980-3127189 + 69 120599534 - Sputw3181_2737 - - putative cold-shock DNA-binding domain protein 3146586-3147437 - 283 120599551 - Sputw3181_2754 - - translation elongation factor Ts 3147558-3148286 - 242 120599552 - Sputw3181_2755 - - ribosomal protein S2 3187534-3187728 + 64 120599579 - Sputw3181_2782 - - hypothetical protein 3213331-3214302 - 323 120599602 - Sputw3181_2805 - - phosphate binding protein 3216783-3217748 - 321 120599605 - Sputw3181_2808 - - porin, Gram-negative type 3233159-3234169 + 336 120599617 - Sputw3181_2820 - - Isocitrate dehydrogenase (NAD(+)) 3237695-3237934 + 79 120599622 - Sputw3181_2825 - - hypothetical protein 3291825-3293147 - 440 120599662 - Sputw3181_2865 - - isocitrate lyase 3407223-3407480 + 85 120599779 - Sputw3181_2982 - - hypothetical protein 3420564-3420917 - 117 120599790 - Sputw3181_2993 - - ribosomal protein L19 3422265-3422516 - 83 120599793 - Sputw3181_2996 - - ribosomal protein S16 3467484-3467864 + 126 120599836 - Sputw3181_3039 - - hypothetical protein 3472651-3473943 + 430 120599842 - Sputw3181_3045 - - glutamate-1-semialdehyde-2,1-aminomutase 3480075-3480341 + 88 120599847 - Sputw3181_3050 - - major outer membrane lipoprotein, putative 3485440-3485655 + 71 120599854 - Sputw3181_3057 - - ribosomal protein S21 3503471-3504571 - 366 120599867 - Sputw3181_3070 - - extracellular solute-binding protein, family 1 3551176-3551442 + 88 120599904 - Sputw3181_3109 - - ribosomal protein S20 3558794-3559894 + 366 120599910 - Sputw3181_3115 - - OmpA/MotB domain protein 3643033-3643287 - 84 120599982 - Sputw3181_3187 - - ribosomal protein L27 3643302-3643613 - 103 120599983 - Sputw3181_3188 - - ribosomal protein L21 3686480-3687736 - 418 120600026 - Sputw3181_3231 - - NADH:ubiquinone oxidoreductase, subunit F 3687783-3688391 - 202 120600027 - Sputw3181_3232 - - NADH:ubiquinone oxidoreductase, subunit E 3689810-3691009 - 399 120600030 - Sputw3181_3235 - - NADH:ubiquinone oxidoreductase, subunit B 3733119-3734912 + 597 120600061 - Sputw3181_3267 - - flavocytochrome c 3741851-3742420 + 189 120600070 - Sputw3181_3276 - - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 3768198-3769265 - 355 120600092 - Sputw3181_3298 - - fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3769479-3770654 - 391 120600093 - Sputw3181_3299 - - Phosphoglycerate kinase 3771915-3773909 - 664 120600095 - Sputw3181_3301 - - transketolase 3774388-3775539 + 383 120600096 - Sputw3181_3302 - - Methionine adenosyltransferase 3860673-3862757 + 694 120600176 - Sputw3181_3384 - - Endothelin-converting enzyme 1 3871975-3873063 - 362 120600186 - Sputw3181_3394 - - porin, Gram-negative type 3900595-3901047 - 150 120600211 - Sputw3181_3419 - - ribosomal protein L9 3901084-3901311 - 75 120600212 - Sputw3181_3420 - - ribosomal protein S18 3901637-3902032 - 131 120600214 - Sputw3181_3422 - - ribosomal protein S6 3910446-3910838 - 130 120600222 - Sputw3181_3430 - - ribosomal protein S9 3910853-3911281 - 142 120600223 - Sputw3181_3431 - - ribosomal protein L13 3948601-3950238 - 545 120600261 - Sputw3181_3469 - - chaperonin GroEL 3950296-3950586 - 96 120600262 - Sputw3181_3470 - - chaperonin Cpn10 3968178-3969581 - 467 120600278 - Sputw3181_3486 - - Nitrite reductase (cytochrome; ammonia-forming) 3976738-3977454 + 238 120600285 - Sputw3181_3493 - - two component transcriptional regulator, winged helix family 4033123-4033833 - 236 120600326 - Sputw3181_3534 - - single-strand binding protein 4038888-4040810 + 640 120600329 - Sputw3181_3537 - - DEAD/DEAH box helicase domain protein 4138593-4138832 - 79 120600408 - Sputw3181_3619 - - ribosomal protein L31 4148253-4149005 + 250 120600417 - Sputw3181_3628 - - hypothetical protein 4149108-4149866 - 252 120600418 - Sputw3181_3629 - - uridine phosphorylase 4175777-4176697 + 306 120600444 - Sputw3181_3655 - - Inorganic diphosphatase 4185487-4186242 + 251 120600453 - Sputw3181_3664 - - ubiquinone/menaquinone biosynthesis methyltransferase 4188568-4188807 + 79 120600456 - Sputw3181_3667 - - twin-arginine translocation protein, TatA/E family subunit 4300508-4301986 - 492 120600540 - Sputw3181_3755 - - ketol-acid reductoisomerase 4317913-4318191 + 92 120600556 - Sputw3181_3771 - - DNA-directed RNA polymerase, omega subunit 4414652-4415875 - 407 120600641 - Sputw3181_3857 - - Argininosuccinate synthase 4436109-4438958 + 949 120600655 - Sputw3181_3871 - - molybdopterin oxidoreductase 4441265-4444117 + 950 120600659 - Sputw3181_3875 - - molybdopterin oxidoreductase 4444147-4444716 + 189 120600660 - Sputw3181_3876 - - 4Fe-4S ferredoxin, iron-sulfur binding domain protein 4465656-4466132 - 158 120600680 - Sputw3181_3896 - - hypothetical protein 4486067-4486924 - 285 120600694 - Sputw3181_3910 - - RNA polymerase, sigma 32 subunit, RpoH 4491509-4492072 - 187 120600700 - Sputw3181_3916 - - NapC/NirT cytochrome c domain protein 4635945-4636430 - 161 120600818 - Sputw3181_4036 - - protein-export protein SecB 4652217-4654046 - 609 120600830 - Sputw3181_4048 - - glucosamine--fructose-6-phosphate aminotransferase, isomerizing 4655062-4657167 - 701 120600832 - Sputw3181_4050 - - TonB-dependent siderophore receptor 4659006-4659434 - 142 120600834 - Sputw3181_4052 - - ATP synthase F1, epsilon subunit 4659469-4660860 - 463 120600835 - Sputw3181_4053 - - ATP synthase F1, beta subunit 4661807-4663348 - 513 120600837 - Sputw3181_4055 - - ATP synthase F1, alpha subunit 4664410-4664664 - 84 120600840 - Sputw3181_4058 - - ATP synthase F0, C subunit