Yersinia pestis biovar Microtus str. 91001, complete genome - 1..4595065 Location Strand Length PID Gene Synonym Code COG Product 32926-34335 - 469 45439890 glnA YP_0025 - - glutamine synthetase 34897-36720 + 607 45439892 bipA YP_0027 - COG1217T putative GTPase 52229-52504 - 91 45439905 rpoZ YP_0040 - COG1758K DNA-directed RNA polymerase omega subunit 62724-62891 + 55 45439917 rpmG YP_0052 - COG0267J 50S ribosomal protein L33 68805-69746 - 313 45439924 rfaD YP_0059 - COG0451MG ADP-L-glycero-D-manno-heptose-6-epimerase 74705-76252 - 515 45439928 gpmI YP_0064 - COG0696G phosphoglyceromutase 77538-78014 + 158 45439931 secB YP_0067 - COG1952U export protein SecB 97925-98692 - 255 45439952 tpiA YP_0089 - COG0149G triosephosphate isomerase 110596-110835 + 79 45439965 - YP_0102 - - hypothetical protein 120715-120930 + 71 45439975 rpmE1 YP_0112 - COG0254J 50S ribosomal protein L31 209609-210223 + 204 45440051 slyD YP_0191 - COG1047O peptidyl-prolyl cis-trans isomerase 210938-211777 + 279 45440054 fkpA YP_0194 - COG0545O peptidyl-prolyl cis-trans isomerase 213958-214332 + 124 45440059 rpsL YP_0199 - - 30S ribosomal protein S12 214429-214899 + 156 45440060 rpsG YP_0200 - COG0049J 30S ribosomal protein S7 214993-217101 + 702 45440061 fusA YP_0201 - COG0480J elongation factor G 217174-218358 + 394 45440062 tuf YP_0202 - COG0050J elongation factor Tu 220367-220678 + 103 45440066 rpsJ YP_0206 - COG0051J 30S ribosomal protein S10 220711-221340 + 209 45440067 rplC YP_0207 - - 50S ribosomal protein L3 221357-221962 + 201 45440068 rplD YP_0208 - - 50S ribosomal protein L4 221959-222261 + 100 45440069 rplW YP_0209 - COG0089J 50S ribosomal protein L23 222278-223102 + 274 45440070 rplB YP_0210 - COG0090J 50S ribosomal protein L2 223410-223742 + 110 45440072 rplV YP_0212 - - 50S ribosomal protein L22 223760-224458 + 232 45440073 rpsC YP_0213 - COG0092J 30S ribosomal protein S3 225889-226203 + 104 45440078 rplX YP_0218 - COG0198J 50S ribosomal protein L24 226218-226757 + 179 45440079 rplE YP_0219 - COG0094J 50S ribosomal protein L5 227110-227502 + 130 45440081 rpsH YP_0221 - - 30S ribosomal protein S8 228060-228413 + 117 45440083 rplR YP_0223 - COG0256J 50S ribosomal protein L18 228428-228931 + 167 45440084 rpsE YP_0224 - COG0098J 30S ribosomal protein S5 228934-229113 + 59 45440085 rpmD YP_0225 - COG1841J 50S ribosomal protein L30 229117-229551 + 144 45440086 rplO YP_0226 - COG0200J 50S ribosomal protein L15 230924-231040 + 38 45440088 rpmJ1 YP_0228 - COG0257J 50S ribosomal protein L36 231188-231544 + 118 45440089 rpsM YP_0229 - COG0099J 30S ribosomal protein S13 231561-231950 + 129 45440090 rpsK YP_0230 - COG0100J 30S ribosomal protein S11 231981-232601 + 206 45440091 rpsD YP_0231 - COG0522J 30S ribosomal protein S4 233657-234046 + 129 45440093 rplQ YP_0233 - COG0203J 50S ribosomal protein L17 268258-270921 + 887 45440125 aceE YP_0265 - COG2609C pyruvate dehydrogenase E1 component 270935-272464 + 509 45440126 aceF YP_0266 - COG0508C dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex 272767-274194 + 475 45440128 lpdA YP_0268 - COG1249C dihydrolipoamide dehydrogenase 325446-326741 + 431 45440169 eno YP_0310 - COG0148G phosphopyruvate hydratase 402273-403343 + 356 45440236 recA YP_0379 - COG0468L recombinase A 415668-415916 + 82 45440248 rpsP YP_0391 - - 30S ribosomal protein S16 417346-417693 + 115 45440251 rplS YP_0394 - - 50S ribosomal protein L19 479150-479605 + 151 45440308 terB YP_0454 - COG3793P tellurite resistance protein 480722-481306 + 194 45440310 terD YP_0456 - COG2310T putative tellurium resistance protein 481490-482065 + 191 45440311 terE YP_0457 - COG2310T tellurium resistance protein 542269-542562 + 97 45440359 groES YP_0505 - COG0234O co-chaperonin GroES 542609-544255 + 548 45440360 groEL YP_0506 - COG0459O chaperonin GroEL 548700-549434 - 244 45440368 frdB YP_0514 - COG0479C succinate dehydrogenase 568260-568565 + 101 45440383 ymr YP_0529 - COG1923R RNA-binding protein Hfq 570191-571450 + 419 45440385 hflK YP_0531 - COG0330O hypothetical protein 572918-574228 + 436 45440388 purA YP_0534 - - adenylosuccinate synthetase 582397-582789 + 130 45440396 rpsF YP_0542 - COG0360J 30S ribosomal protein S6 583120-583347 + 75 45440398 rpsR YP_0544 - - 30S ribosomal protein S18 583387-583839 + 150 45440399 rplI YP_0545 - COG0359J 50S ribosomal protein L9 602805-603332 - 175 45440416 ppa YP_0562 - COG0221C inorganic pyrophosphatase 611817-612074 + 85 45440426 rpmA YP_0572 - - 50S ribosomal protein L27 617854-618330 + 158 45440432 greA YP_0578 - COG0782K transcription elongation factor GreA 625367-626872 + 501 45440440 nusA YP_0586 - COG0195K transcription elongation factor NusA 626897-629575 + 892 45440441 infB YP_0587 - COG0532J translation initiation factor IF-2 631147-631416 + 89 45440444 rpsO YP_0590 - - 30S ribosomal protein S15 633028-635241 + 737 45440447 pnp YP_0593 - COG1185J polyribonucleotide nucleotidyltransferase 636422-638431 + 669 45440449 deaD YP_0595 - COG0513LKJ inducible ATP-independent RNA helicase 680999-681430 + 143 45440491 - YP_0639 - COG3076S hypothetical protein 682583-685480 - 965 45440493 valS YP_0641 - COG0525J valyl-tRNA synthetase 798919-799521 - 200 45440586 ahpC YP_0737 - COG0450O putative alkyl hydroperoxide reductase subunit c 832577-833881 + 434 45440622 tig YP_0773 - COG0544O trigger factor 839210-839482 + 90 45440626 hupB YP_0777 - - DNA-binding protein HU-beta 877934-878578 + 214 45440661 adk YP_0812 - COG0563F adenylate kinase 913295-914209 - 304 45440684 hflC2 YP_0841 - COG0330O Membrane protease subunits, stomatin/prohibitin homologs 922889-923383 - 164 45440694 ppiB YP_0851 - COG0652O peptidyl-prolyl cis-trans isomerase B 979397-980521 - 374 45440756 ompC1 YP_0916 - COG3203M outer membrane protein C, porin 993429-995717 + 762 45440762 nrdA YP_0923 - COG0209F ribonucleotide-diphosphate reductase alpha subunit 1002050-1003492 + 480 45440770 katA YP_0931 - COG0753P catalase 1027449-1027922 - 157 45440788 - YP_0950 - - hypothetical protein 1110867-1111373 - 168 45440865 pal YP_1031 - COG2885M peptidoglycan-associated lipoprotein Pal 1112836-1114041 - 401 45440867 tolA YP_1033 - COG3064M cell envelope integrity inner membrane protein TolA 1119711-1120583 - 290 45440874 sucD YP_1040 - COG0074C succinyl-CoA synthetase alpha subunit 1120583-1121749 - 388 45440875 sucC YP_1041 - COG0045C succinyl-CoA synthetase subunit beta 1130251-1131531 + 426 45440882 gltA YP_1048 - COG0372C citrate synthase 1154587-1155114 + 175 45440912 fldA2 YP_1080 - COG0716C flavodoxin 1185466-1188048 + 860 45440933 leuS YP_1103 - COG0495J leucyl-tRNA synthetase 1196139-1197341 + 400 45440942 dacA YP_1112 - COG1686M putative penicillin-binding protein 5 1275816-1276919 + 367 45441009 ompC2 YP_1182 - COG3203M putative outer membrane porin C protein 1277161-1278366 + 401 45441010 aspC YP_1183 - COG1448E aspartate aminotransferase 1302163-1303836 - 557 45441028 rpsA YP_1201 - COG0539J 30S ribosomal protein S1 1315637-1317991 + 784 45441037 pflB YP_1210 - COG1882C formate acetyltransferase 1 1337052-1337270 + 72 45441050 infA YP_1223 - COG0361J translation initiation factor IF-1 1360443-1361198 + 251 45441072 artI3 YP_1245 - COG0834ET arginine-binding periplasmic protein 1 precursor 1370833-1371591 + 252 45441083 artJ YP_1256 - COG0834ET arginine 3rd transport system periplasmic binding protein 1379730-1379993 + 87 45441092 grxA YP_1265 - COG0695O glutaredoxin 1 1453003-1453287 + 94 45441151 rplY YP_1324 - COG1825J 50S ribosomal protein L25 1454074-1455165 - 363 45441153 ompA1 YP_1326 - COG2885M putative outer membrane porin A protein 1491179-1491670 + 163 45441187 hcp3 YP_1361 - - Hemolysin-coregulated protein (uncharacterized) 1583136-1584596 + 486 45441255 gnd YP_1430 - COG0362G 6-phosphogluconate dehydrogenase 1603954-1604271 + 105 45441272 - YP_1448 - - hypothetical protein 1615420-1616790 - 456 45441281 argG YP_1458 - COG0137E argininosuccinate synthase 1646308-1646517 + 69 45441309 cspC2 YP_1486 - - cold shock protein 1671260-1671484 + 74 45441341 - YP_1521 - - hypothetical protein 1701530-1702639 - 369 45441370 fliC YP_1551 - COG1344N flagellin 1860881-1861408 + 175 45441500 - YP_1686 - COG3470P hypothetical protein 1962414-1963718 + 434 45441582 icdA YP_1771 - COG0538C isocitrate dehydrogenase 1980037-1980249 + 70 45441597 cspC3 YP_1786 - - cold shock protein 2048829-2049467 + 212 45441642 rpiB2 YP_1838 - COG0698G hypothetical protein 2067235-2068326 - 363 45441662 - YP_1858 - COG0012J Predicted GTPase 2116304-2117059 + 251 45441700 - YP_1898 - - hypothetical protein 2176275-2177279 - 334 45441758 gapA YP_1957 - COG0057G glyceraldehyde-3-phosphate dehydrogenase 2198473-2201148 - 891 45441777 adhE YP_1976 - COG1012C,COG1454C aldehyde-alcohol dehydrogenase 2344678-2344974 + 98 45441898 asr1 YP_2105 - - putative acid shock protein 2351476-2352081 + 201 45441903 acpD YP_2110 - COG1182I acyl carrier protein phosphodiesterase 2426071-2427483 + 470 45441972 pykF YP_2180 - - pyruvate kinase 2427795-2428040 + 81 45441973 lpp YP_2181 - - major outer membrane lipoprotein 2468489-2468845 - 118 45442008 rplT YP_2218 - - 50S ribosomal protein L20 2468883-2469080 - 65 45442009 rpmI YP_2219 - COG0291J 50S ribosomal protein L35 2501439-2501675 - 78 45442044 acpP3 YP_2254 - COG0236IQ acyl carrier protein 2505569-2505736 - 55 45442049 rpmF YP_2259 - COG0333J 50S ribosomal protein L32 2508671-2512336 + 1221 45442053 rne YP_2263 - COG1530J ribonuclease E 2582664-2583194 - 176 45442111 ompX YP_2321 - COG3637M outer membrane protein X 2588569-2589312 + 247 45442117 glnH YP_2327 - COG0834ET glutamine ABC transporter periplasmic-binding protein 2594321-2594581 + 86 45442122 porA YP_2332 - - hypothetical protein 2598362-2599219 - 285 45442126 menB YP_2336 - COG0447H naphthoate synthase 2624896-2625438 - 180 45442148 nuoI YP_2359 - COG1143C NADH dehydrogenase subunit I 2625453-2626430 - 325 45442149 nuoH YP_2360 - COG1005C NADH dehydrogenase subunit H 2630640-2631203 - 187 45442152 nuoE YP_2363 - COG1905C ATP synthase subunit E 2643825-2645027 + 400 45442166 ackA YP_2377 - COG0282C acetate/propionate kinase 2645195-2647348 + 717 45442167 pta YP_2378 - COG0280C,COG0857R phosphate acetyltransferase 2672900-2673430 - 176 45442193 smfA YP_2404 - COG3539NU putative mannose-resistant/Proteus-like fimbrialprotein 2675321-2676520 - 399 45442195 fabB YP_2406 - COG0304IQ 3-oxoacyl-(acyl carrier protein) synthase 2798575-2798835 - 86 45442310 napF1 YP_2528 - - Ferredoxin 2 2819643-2819981 + 112 45442326 glnB YP_2545 - COG0347E nitrogen regulatory protein P-II 2823245-2824498 + 417 45442328 glyA YP_2548 - COG0112E serine hydroxymethyltransferase 2830285-2831088 - 267 45442335 suhB YP_2555 - COG0483G putative inositol monophosphatase familyprotein 2832684-2833913 + 409 45442338 nifS_2 YP_2558 - COG1104E cysteine desulfurase 2847772-2848326 - 184 45442350 fimA4 YP_2572 - COG3539NU putative fimbrial protein 2901900-2902157 + 85 45442395 ptsH YP_2618 - COG1925G PTS system, phosphocarrier protein 2903982-2904491 + 169 45442397 crr YP_2620 - - glucose-specific PTS system enzyme IIA component 3036223-3037770 - 515 45442509 guaB YP_2737 - COG0516F,COG0517R inositol-5-monophosphate dehydrogenase 3050457-3050885 - 142 45442521 ndk YP_2749 - - nucleoside diphosphate kinase 3065530-3066099 + 189 45442529 - YP_2759 - - hypothetical protein 3088556-3089371 + 271 45442546 nlpA2 YP_2778 - COG1464P putative lipoprotein 3116009-3116866 - 285 45442574 tsf YP_2806 - - elongation factor Ts 3116994-3117803 - 269 45442575 rpsB YP_2807 - - 30S ribosomal protein S2 3291406-3293301 - 631 45442721 rpoD YP_2958 - COG0568K RNA polymerase sigma factor 3295286-3295501 - 71 45442723 rpsU YP_2960 - COG0828J 30S ribosomal protein S21 3402632-3403150 + 172 45442824 hcp7 YP_3069 - - Hemolysin-coregulated protein (uncharacterized) 3408482-3409693 + 403 45442831 malE YP_3076 - COG2182G periplasmic maltose-binding protein 3413046-3414692 - 548 45442835 pgi YP_3080 - COG0166G glucose-6-phosphate isomerase 3445587-3445862 - 91 45442848 hupA YP_3094 - - DNA-binding protein HU-alpha 3457236-3461456 - 1406 45442863 rpoC YP_3109 - COG0086K DNA-directed RNA polymerase beta' subunit 3461585-3465613 - 1342 45442864 rpoB YP_3110 - COG0085K DNA-directed RNA polymerase beta subunit 3465956-3466243 - 95 45442865 rplL YP_3111 - COG0222J Ribosomal protein L7/L12 3466391-3466888 - 165 45442866 rplJ YP_3112 - COG0244J 50S ribosomal protein L10 3467253-3467957 - 234 45442867 rplA YP_3113 - - 50S ribosomal protein L1 3467961-3468389 - 142 45442868 rplK YP_3114 - - 50S ribosomal protein L11 3469761-3470945 - 394 45442871 tuf YP_3117 - COG0050J elongation factor Tu 3491829-3492560 - 243 45442886 aHP1 YP_3132 - COG0695O,COG0678O putative peroxiredoxin/glutaredoxin family protein 3517752-3518678 + 308 45442903 ilvE YP_3149 - COG0115EH branched-chain amino acid aminotransferase 3527007-3528485 + 492 45442912 ilvC YP_3158 - COG0059EH ketol-acid reductoisomerase 3540134-3540430 - 98 45442924 ppiC YP_3172 - COG0760O peptidyl-prolyl cis-trans isomerase C 3551946-3553208 + 420 45442934 rffD YP_3182 - COG0677M putative UDP-glucose/GDP-mannose dehydrogenase 3614240-3615370 + 376 45442993 livK2 YP_3241 - COG0683E high-affinity leucine-specificleucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system; periplasmic binding protein 3735599-3735754 + 51 45443087 - YP_3338 - - hypothetical protein 3770620-3772227 - 535 45443113 dppA YP_3365 - COG0747E periplasmic dipeptide transport protein 3933370-3934920 + 516 45443204 - YP_3462 - - hypothetical protein 3938707-3939198 + 163 45443208 hcp8 YP_3466 - - Hemolysin-coregulated protein (uncharacterized) 3995910-3997064 - 384 45443250 metK YP_3512 - COG0192H S-adenosylmethionine synthetase 4002264-4004258 + 664 45443254 tktA3 YP_3516 - COG0021G transketolase 4006484-4007647 + 387 45443257 pgk YP_3519 - - phosphoglycerate kinase 4007767-4008846 + 359 45443258 fbaA YP_3520 - COG0191G fructose-bisphosphate aldolase 4078212-4079144 - 310 45443320 prfB2 YP_3585 - COG1186J peptide chain release factor RF-2 4099320-4099706 - 128 45443337 gcsH YP_3603 - COG0509E glycine cleavage system protein H 4115621-4118335 - 904 45443352 secA YP_3620 - COG0653U translocase 4208508-4211741 - 1077 45443429 carB YP_3697 - COG0458EF carbamoyl-phosphate synthase large subunit 4221689-4221952 + 87 45443440 rpsT YP_3708 - COG0268J 30S ribosomal protein S20 4225790-4227700 - 636 45443444 dnaK YP_3712 - COG0443O molecular chaperone DnaK 4233881-4234873 - 330 45443450 talB YP_3718 - - transaldolase 4255326-4256993 + 555 45443468 uup4 YP_3736 - COG0488R ATPase components of ABC transporters with duplicated ATPase domains 4263351-4264076 - 241 45443474 deoD YP_3742 - COG0813F purine nucleoside phosphorylase 4347141-4347539 - 132 45443548 rpsI YP_3817 - - 30S ribosomal protein S9 4347548-4347991 - 147 45443549 rplM YP_3818 - - 50S ribosomal protein L13 4369582-4370007 + 141 45443574 tdcF5 YP_3844 - COG0251J Putative translation initiation inhibitor 4416699-4417742 - 347 45443610 mreB YP_3881 - COG1077D rod shape-determining protein MreB 4424665-4426014 + 449 45443617 accC2 YP_3888 - COG0439I acetyl-CoA carboxylase 4431346-4431642 + 98 45443622 fiS YP_3893 - COG2901KL DNA-binding protein Fis 4439024-4439236 + 70 45443632 cspa1 YP_3903 - - major cold shock protein Cspa1 4521251-4521874 + 207 45443696 sodA YP_3972 - COG0605P superoxide dismutase (Mn) 4525866-4526114 - 82 45443700 - YP_3976 - - hypothetical protein 4532305-4534374 - 689 45443705 glyS YP_3981 - COG0751J glycyl-tRNA synthetase beta subunit