Yersinia pseudotuberculosis IP 32953, complete genome - 1..4744671 Location Strand Length PID Gene Synonym Code COG Product 32506-33915 - 469 51594382 glnA YPTB0024 - - glutamine synthetase 34478-36301 + 607 51594383 bipA YPTB0025 - COG1217T putative GTPase 49849-50124 - 91 51594394 rpoZ YPTB0036 - COG1758K DNA-directed RNA polymerase omega subunit 60463-60630 + 55 51594406 rpmG YPTB0048 - COG0267J 50S ribosomal protein L33 66544-67476 - 310 51594413 rfaD YPTB0055 - COG0451MG ADP-L-glycero-D-manno-heptose-6-epimerase 72520-74067 - 515 51594418 - YPTB0060 - COG0696G phosphoglyceromutase 75354-75830 + 158 51594421 secB YPTB0063 - COG1952U export protein SecB 93800-94567 - 255 51594439 tpiA YPTB0081 - COG0149G triosephosphate isomerase 105802-106041 + 79 51594450 - YPTB0092 - - hypothetical protein 115920-116135 + 71 51594460 rpmE YPTB0102 - COG0254J 50S ribosomal protein L31 141499-142230 - 243 51594477 - YPTB0119 - COG0678O,COG0695O putative peroxiredoxin/glutaredoxin family protein 167545-168471 + 308 51594494 ilvE YPTB0136 - COG0115EH branched-chain amino acid aminotransferase 168782-170632 + 616 51594495 ilvD YPTB0137 - - dihydroxy-acid dehydratase 176746-178224 + 492 51594503 ilvC YPTB0145 - COG0059EH ketol-acid reductoisomerase 204927-206189 + 420 51594527 rffD YPTB0171 - COG0677M putative UDP-glucose/GDP-mannose dehydrogenase 209146-210276 + 376 51594531 rffA YPTB0175 - COG0399M putative lipopolysaccharide biosynthesis protein 268792-269907 + 371 51594581 livK YPTB0226 - COG0683E ABC type periplasmic branched-chain amino acid-binding protein 330818-332002 + 394 51594631 tuf YPTB0276 - COG0050J elongation factor Tu 333374-333802 + 142 51594634 rplK YPTB0279 - - 50S ribosomal protein L11 333806-334510 + 234 51594635 rplA YPTB0280 - - 50S ribosomal protein L1 334875-335372 + 165 51594636 rplJ YPTB0281 - COG0244J 50S ribosomal protein L10 335439-335807 + 122 51594637 rplL YPTB0282 - COG0222J 50S ribosomal protein L7/L12 336150-340178 + 1342 51594638 rpoB YPTB0283 - COG0085K DNA-directed RNA polymerase beta subunit 340307-344527 + 1406 51594639 rpoC YPTB0284 - COG0086K DNA-directed RNA polymerase beta' subunit 355900-356175 + 91 51594652 hupA YPTB0297 - - DNA-binding protein HU-alpha 421273-421851 + 192 51594711 terD YPTB0356 - COG2310T tellurium resistance protein 422035-422610 + 191 51594712 terE YPTB0357 - COG2310T tellurium resistance protein 482818-483111 + 97 51594756 groES YPTB0404 - COG0234O co-chaperonin GroES 483158-484804 + 548 51594757 groEL YPTB0405 - COG0459O chaperonin GroEL 487175-487741 + 188 51594760 efp YPTB0408 - COG0231J elongation factor P 489249-489983 - 244 51594764 frdB YPTB0412 - COG0479C succinate dehydrogenase 511176-512438 + 420 51594779 hflK YPTB0427 - COG0330O hypothetical protein 513918-515216 + 432 51594782 purA YPTB0430 - - adenylosuccinate synthetase 523443-523835 + 130 51594790 rpsF YPTB0438 - COG0360J 30S ribosomal protein S6 524166-524393 + 75 51594792 rpsR YPTB0440 - - 30S ribosomal protein S18 524433-524885 + 150 51594793 rplI YPTB0441 - COG0359J 50S ribosomal protein L9 541216-541743 - 175 51594807 ppa YPTB0455 - COG0221C inorganic pyrophosphatase 549900-550211 + 103 51594816 rplU YPTB0464 - - 50S ribosomal protein L21 550231-550488 + 85 51594817 rpmA YPTB0465 - - 50S ribosomal protein L27 563799-565286 + 495 51594831 nusA YPTB0479 - COG0195K transcription elongation factor NusA 565311-567989 + 892 51594832 infB YPTB0480 - COG0532J translation initiation factor IF-2 568055-568465 + 136 51594833 rbfA YPTB0481 - COG0858J ribosome-binding factor A 569561-569830 + 89 51594835 rspO YPTB0483 - - 30S ribosomal protein S15 570094-572208 + 704 51594836 pnp YPTB0484 - COG1185J polyribonucleotide nucleotidyltransferase 573404-575398 + 664 51594838 deaD YPTB0486 - COG0513LKJ cold-shock dead-box protein A 617983-618414 + 143 51594879 - YPTB0527 - COG3076S hypothetical protein 619419-622316 - 965 51594881 valS YPTB0529 - COG0525J valyl-tRNA synthetase 686872-688095 + 407 51594934 deoB YPTB0583 - COG1015G phosphopentomutase 688220-688939 + 239 51594935 deoD YPTB0584 - COG0813F purine nucleoside phosphorylase 695345-697012 - 555 51594941 yjjK YPTB0590 - COG0488R putative ABC drug efflux transporter, fused ATP binding domains 717504-718457 + 317 51594957 talB YPTB0606 - - transaldolase 724649-726559 + 636 51594962 dnaK YPTB0611 - COG0443O molecular chaperone DnaK 730397-730660 - 87 51594966 rpsT YPTB0615 - COG0268J 30S ribosomal protein S20 831181-832332 + 383 51595043 ftsZ YPTB0693 - COG0206D cell division protein FtsZ 834683-837397 + 904 51595047 secA YPTB0697 - COG0653U translocase 853601-856264 + 887 51595063 aceE YPTB0713 - COG2609C pyruvate dehydrogenase, decarboxylase component, thiamin-binding 856278-857852 + 524 51595064 aceF YPTB0714 - COG0508C pyruvate dehydrogenase, dihydrolipoyltransacetylase component 858155-859582 + 475 51595065 lpdA YPTB0715 - COG1249C dihydrolipoamide dehydrogenase 910432-911727 + 431 51595105 eno YPTB0755 - COG0148G phosphopyruvate hydratase 988499-989569 + 356 51595173 recA YPTB0823 - COG0468L recombinase A 1002308-1002556 + 82 51595184 rpsP YPTB0834 - - 30S ribosomal protein S16 1003986-1004333 + 115 51595187 rplS YPTB0837 - - 50S ribosomal protein L19 1118856-1119458 - 200 51595275 ahpC YPTB0925 - COG0450O putative alkyl hydroperoxide reductase subunit C 1122980-1123315 + 111 51595279 yajC YPTB0929 - COG1862U preprotein translocase subunit YajC 1129658-1130128 + 156 51595285 ribH YPTB0935 - - riboflavin synthase subunit beta 1151113-1152417 + 434 51595308 tig YPTB0958 - COG0544O trigger factor 1157746-1158018 + 90 51595312 hupB YPTB0962 - - DNA-binding protein HU-beta, NS1 (HU-1) 1196569-1197213 + 214 51595346 adk YPTB0996 - COG0563F adenylate kinase 1231944-1232858 - 304 51595374 - YPTB1025 - COG0330O hypothetical protein 1241558-1242052 - 164 51595383 ppiB YPTB1034 - COG0652O peptidyl-prolyl cis-trans isomerase B 1305983-1306192 + 69 51595435 cspE YPTB1088 - - cold shock protein E 1310535-1311737 - 400 51595441 dacA YPTB1094 - COG1686M putative penicillin-binding protein 5 1319842-1322424 - 860 51595450 leuS YPTB1103 - COG0495J leucyl-tRNA synthetase 1352789-1353316 - 175 51595472 fldA YPTB1125 - COG0716C flavodoxin 1365338-1366618 - 426 51595486 gltA YPTB1142 - COG0372C citrate synthase 1375120-1376286 + 388 51595493 sucC YPTB1149 - COG0045C succinyl-CoA synthetase subunit beta 1376286-1377158 + 290 51595494 sucD YPTB1150 - COG0074C succinyl-CoA synthetase alpha subunit 1382844-1384010 + 388 51595502 tolA YPTB1158 - COG3064M cell envelope integrity inner membrane protein TolA 1385473-1385979 + 168 51595504 pal YPTB1160 - COG2885M peptidoglycan-associated lipoprotein Pal, OmpA family of porins 1392836-1393588 - 250 51595510 gpmA YPTB1166 - COG0588G phosphoglyceromutase 1461648-1462121 + 157 51595571 - YPTB1227 - - hypothetical protein 1486151-1487593 - 480 51595590 katA YPTB1246 - COG0753P catalase 1493904-1496192 - 762 51595598 nrdA YPTB1254 - COG0209F ribonucleotide-diphosphate reductase alpha subunit 1509158-1510282 + 374 51595605 - YPTB1261 - COG3203M outer membrane protein C, porin 1546761-1547045 - 94 51595640 rplY YPTB1299 - COG1825J 50S ribosomal protein L25 1620307-1620570 - 87 51595699 grxA YPTB1358 - COG0695O glutaredoxin 1 1628681-1629412 - 243 51595707 artJ YPTB1367 - COG0834ET ABC transporter, periplasmic arginine binding protein artJ 1639047-1639778 - 243 51595717 artI YPTB1377 - COG0834ET ABC transporter, periplasmic arginine-binding protein artI 1662279-1662497 - 72 51595735 infA YPTB1395 - COG0361J translation initiation factor IF-1 1681621-1683903 - 760 51595748 pflB YPTB1408 - COG1882C formate acetyltransferase 1 1695842-1697515 + 557 51595757 rpsA YPTB1417 - COG0539J 30S ribosomal protein S1 1720670-1721860 - 396 51595774 aspC YPTB1434 - COG1448E aspartate aminotransferase 1722117-1723199 - 360 51595775 - YPTB1435 - COG3203M General Bacterial Porin (GBP) family protein 1746843-1747904 - 353 51595793 ompA YPTB1453 - COG2885M putative outer membrane porin A protein 1776335-1777885 + 516 51595821 - YPTB1484 - - hypothetical protein 1781672-1782163 + 163 51595825 - YPTB1488 - - hypothetical protein 1829323-1830315 + 330 51595859 mglB YPTB1522 - COG1879G ABC transporter, perplasmic galactose-binding protein 1871666-1873075 + 469 51595890 gnd YPTB1553 - COG0362G 6-phosphogluconate dehydrogenase 1894578-1894895 + 105 51595908 - YPTB1571 - - hypothetical protein 1906036-1907403 - 455 51595916 argG YPTB1579 - COG0137E argininosuccinate synthase 1973340-1973549 + 69 51595960 cspC YPTB1624 - - cold shock protein 2068249-2069358 + 369 51596049 fliC YPTB1714 - COG1344N flagellin 2138463-2138732 - 89 51596122 - YPTB1787 - - hypothetical protein 2222076-2222318 - 80 51596212 - YPTB1880 - - hypothetical protein 2354015-2355106 - 363 51596324 ychF YPTB1998 - COG0012J hypothetical protein 2402812-2403555 + 247 51596364 - YPTB2038 - - hypothetical protein 2454445-2455440 - 331 51596409 gapA YPTB2083 - COG0057G glyceraldehyde-3-phosphate dehydrogenase 2478099-2480774 - 891 51596429 adhE YPTB2103 - COG1012C,COG1454C aldehyde-alcohol dehydrogenase 2641862-2642158 + 98 51596561 - YPTB2237 - - acid shock protein 2648710-2649315 + 201 51596566 acpD YPTB2242 - COG1182I acyl carrier protein phosphodiesterase 2672155-2672658 + 167 51596585 tpx YPTB2261 - COG2077O thiol peroxidase 2722148-2723560 + 470 51596630 pykF YPTB2306 - - pyruvate kinase 2723881-2724117 + 78 51596631 lpp YPTB2307 - - major outer membrane lipoprotein 2761963-2762319 - 118 51596663 rplT YPTB2339 - - 50S ribosomal protein L20 2762357-2762554 - 65 51596664 rpmI YPTB2340 - COG0291J 50S ribosomal protein L35 2777111-2777872 + 253 51596681 kduD1 YPTB2357 - COG1028IQR 2-deoxy-D-gluconate 3-dehydrogenase 2853780-2853992 - 70 51596736 cspC YPTB2414 - - cold shock protein 2870301-2871554 - 417 51596749 icdA YPTB2427 - COG0538C isocitrate dehydrogenase 2915805-2916041 - 78 51596792 acpP YPTB2470 - COG0236IQ acyl carrier protein 2919935-2920102 - 55 51596797 rpmF YPTB2475 - COG0333J 50S ribosomal protein L32 3009848-3010372 - 174 51596861 ompX YPTB2542 - COG3637M outer membrane protein X 3015753-3016496 + 247 51596867 glnH YPTB2548 - COG0834ET glutamine ABC transporter periplasmic-binding protein 3021537-3021797 + 86 51596873 - YPTB2554 - - hypothetical protein 3025578-3026435 - 285 51596877 menB YPTB2558 - COG0447H naphthoate synthase 3052282-3052824 - 180 51596899 nuoI YPTB2580 - COG1143C NADH dehydrogenase subunit I 3071601-3072803 + 400 51596916 ackA YPTB2597 - COG0282C acetate/propionate kinase 3072971-3075124 + 717 51596917 pta YPTB2598 - COG0280C,COG0857R phosphate acetyltransferase 3100626-3101156 - 176 51596943 smfA YPTB2624 - COG3539NU putative mannose-resistant/Proteus-like fimbrial protein 3103047-3104270 - 407 51596945 fabB YPTB2626 - COG0304IQ 3-oxoacyl-(acyl carrier protein) synthase 3146390-3146959 - 189 51596983 - YPTB2664 - - hypothetical protein 3153675-3154220 - 181 51596989 - YPTB2670 - COG3539NU frimbrial protein 3208629-3208886 + 85 51597034 ptsH YPTB2715 - COG1925G PTS system, phosphocarrier protein 3210711-3211220 + 169 51597036 crr YPTB2717 - - glucose-specific PTS system enzyme IIA component 3361158-3361586 - 142 51597161 ndk YPTB2845 - - nucleoside diphosphate kinase 3384389-3385618 - 409 51597175 iscS YPTB2859 - COG1104E cysteine desulfurase 3387214-3388017 + 267 51597178 suhB YPTB2862 - COG0483G putative inositol monophosphatase family protein 3393893-3395146 - 417 51597185 glyA YPTB2869 - COG0112E serine hydroxymethyltransferase 3398422-3398760 - 112 51597188 glnB YPTB2872 - COG0347E nitrogen regulatory protein P-II 3416966-3417226 + 86 51597201 fdx YPTB2885 - - putative [4Fe-4S] ferredoxin 3434560-3434943 - 127 51597219 - YPTB2903 - COG3445R hypothetical protein 3483443-3483655 - 70 51597265 cspB YPTB2950 - - cold shock protein 3513624-3514439 + 271 51597290 - YPTB2975 - COG1464P possible ABC transporter, periplasmic solute binding protein 3531726-3532274 - 182 51597309 ompH YPTB2994 - COG2825M cationic 19 kDa outer membrane protein precursor 3541066-3541923 - 285 51597317 tsf YPTB3002 - - elongation factor Ts 3542052-3542777 - 241 51597318 rpsB YPTB3003 - - 30S ribosomal protein S2 3546919-3547743 + 274 51597321 dapD YPTB3006 - COG2171E 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 3742324-3742710 - 128 51597491 gcsH YPTB3181 - COG0509E glycine cleavage system protein H 3757711-3758739 - 342 51597505 fbaA YPTB3195 - COG0191G fructose-bisphosphate aldolase 3758911-3760074 - 387 51597506 pgk YPTB3196 - - phosphoglycerate kinase 3761572-3763566 - 664 51597508 tktA YPTB3198 - COG0021G transketolase 3769297-3770451 + 384 51597513 metK YPTB3203 - COG0192H S-adenosylmethionine synthetase 3826135-3826626 - 163 51597551 - YPTB3247 - - hypothetical protein 3830413-3831957 - 514 51597555 - YPTB3251 - - hypothetical protein 3997470-3998000 - 176 51597663 smfA YPTB3364 - COG3539NU putative mannose-resistant Proteus-like fimbrial protein 4004309-4004506 + 65 51597667 - YPTB3369 - - hypothetical protein 4057757-4057972 + 71 51597714 rpsU YPTB3416 - COG0828J 30S ribosomal protein S21 4060014-4061852 + 612 51597716 rpoD YPTB3418 - COG0568K RNA polymerase sigma factor 4177207-4177599 - 130 51597799 rpsI YPTB3507 - - 30S ribosomal protein S9 4177614-4178042 - 142 51597800 rplM YPTB3508 - - 50S ribosomal protein L13 4199134-4199520 + 128 51597825 - YPTB3533 - COG0251J hypothetical protein 4208960-4209508 + 182 51597833 - YPTB3542 - - hypothetical protein 4243281-4244324 - 347 51597856 mreB YPTB3565 - COG1077D rod shape-determining protein MreB 4251247-4252596 + 449 51597863 accC YPTB3572 - COG0439I acetyl-CoA carboxylase 4258300-4258596 + 98 51597868 fiS YPTB3577 - COG2901KL DNA-binding protein Fis 4266018-4266230 + 70 51597876 cspa1 YPTB3585 - - major cold shock protein Cspa1 4266490-4266702 + 70 51597877 cspa1 YPTB3586 - - major cold shock protein Cspa1 4266962-4267174 + 70 51597878 cspa2 YPTB3587 - - major cold shock protein Cspa2 4334582-4335100 + 172 51597930 - YPTB3639 - - hypothetical protein 4337154-4338425 - 423 51597933 lamB YPTB3642 - - maltoporin precursor 4340433-4341644 + 403 51597936 malE YPTB3645 - COG2182G periplasmic maltose-binding protein 4344997-4346643 - 548 51597940 pgi YPTB3649 - COG0166G glucose-6-phosphate isomerase 4383849-4384238 - 129 51597962 rplQ YPTB3672 - COG0203J 50S ribosomal protein L17 4385294-4385914 - 206 51597964 rpsD YPTB3674 - COG0522J 30S ribosomal protein S4 4385945-4386334 - 129 51597965 rpsK YPTB3675 - COG0100J 30S ribosomal protein S11 4386351-4386707 - 118 51597966 rpsM YPTB3676 - COG0099J 30S ribosomal protein S13 4386855-4386971 - 38 51597967 rpmJ YPTB3677 - COG0257J 50S ribosomal protein L36 4388344-4388778 - 144 51597969 rplO YPTB3679 - COG0200J 50S ribosomal protein L15 4388782-4388961 - 59 51597970 rpmD YPTB3680 - COG1841J 50S ribosomal protein L30 4388964-4389467 - 167 51597971 rpsE YPTB3681 - COG0098J 30S ribosomal protein S5 4389482-4389835 - 117 51597972 rplR YPTB3682 - COG0256J 50S ribosomal protein L18 4390393-4390785 - 130 51597974 rpsH YPTB3684 - - 30S ribosomal protein S8 4391138-4391677 - 179 51597976 rplE YPTB3686 - COG0094J 50S ribosomal protein L5 4391692-4392006 - 104 51597977 rplX YPTB3687 - COG0198J 50S ribosomal protein L24 4393437-4394135 - 232 51597982 rpsC YPTB3692 - COG0092J 30S ribosomal protein S3 4394153-4394485 - 110 51597983 rplV YPTB3693 - - 50S ribosomal protein L22 4394793-4395617 - 274 51597985 rplB YPTB3695 - COG0090J 50S ribosomal protein L2 4395634-4395936 - 100 51597986 rplW YPTB3696 - COG0089J 50S ribosomal protein L23 4395933-4396526 - 197 51597987 rplD YPTB3697 - - 50S ribosomal protein L4 4396555-4397184 - 209 51597988 rplC YPTB3698 - - 50S ribosomal protein L3 4397217-4397528 - 103 51597989 rpS10 YPTB3699 - COG0051J 30S ribosomal protein S10 4398811-4399995 - 394 51597992 tuf YPTB3702 - COG0050J elongation factor Tu 4400067-4402175 - 702 51597993 fusA YPTB3703 - COG0480J elongation factor G 4402269-4402739 - 156 51597994 rpsG YPTB3704 - COG0049J 30S ribosomal protein S7 4402836-4403210 - 124 51597995 rpsl YPTB3705 - - 30S ribosomal protein S12 4405391-4406191 - 266 51598000 fkpA YPTB3710 - COG0545O peptidyl-prolyl cis-trans isomerase 4406945-4407538 - 197 51598002 slyD YPTB3712 - COG1047O peptidyl-prolyl cis-trans isomerase 4587661-4589268 - 535 51598132 dppA YPTB3842 - COG0747E ABC transporter, periplasmic dipeptide binding protein