This simle perl script ranks the results of the disagree method at a level 1. The program systematically prunes from a pair of trees the species one-by-one. The species to be pruned are obtained from a given set of species The program returns the split distance value and the percentage of improvement (if any) after removing each species.

     How to run: perl ranking_disagree.pl [topd_program_path] [tree_file] [list_of_species_file].

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