Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence - 0..2841490 Location Strand Length PID Gene Synonym Code COG Product 31882-33282 - 466 17933954 ahcY Atu0029 - COG0499H S-adenosyl-L-homocysteine hydrolase 84465-86606 - 713 17934001 pnpA Atu0082 - COG1185J polyribonucleotide nucleotidyltransferase 86872-87141 - 89 17934003 rpsO Atu0084 - - 30S ribosomal protein S15 92292-93908 - 538 17934008 nusA Atu0089 - COG0195K transcription elongation factor NusA 126205-128106 - 633 17934041 dnaK Atu0122 - COG0443O molecular chaperone DnaK 129957-130970 + 337 17934044 - Atu0126 - COG1744R membrane lipoprotein 177491-178396 - 301 17934091 phnD Atu0173 - COG3221P ABC transporter, substrate binding protein [phosphonate] 254454-255518 + 354 17934174 pheS Atu0258 - COG0016J phenylalanyl-tRNA synthetase alpha subunit 297124-298422 + 432 17934221 ugpA Atu0305 - COG1653G ABC transporter, substrate binding protein [sn-glycerol 3-phosphate] 344569-345633 + 354 17934265 trpS Atu0349 - COG0180J tryptophanyl-tRNA synthetase 356352-357614 + 420 17934278 metK Atu0362 - COG0192H S-adenosylmethionine synthetase 386925-388217 + 430 17934309 - Atu0394 - COG1653G ABC transporter, substrate binding protein [sugar] 416277-417311 + 344 17934334 - Atu0420 - COG0226P ABC transporter, substrate binding protein [phosphate] 534486-535406 - 306 17934456 flaA Atu0545 - COG1344N flagella associated protein 537039-537758 - 239 17934459 flgH Atu0548 - COG2063N flagellar L-ring protein precursor 539915-540703 - 262 17934463 flgG Atu0552 - COG4786N flagellar basal-body rod protein 545746-546618 + 290 17934471 motA Atu0560 - COG1291N flagellar motor protein 612449-613870 + 473 17934534 guaB Atu0624 - COG0517R,COG0516F inositol-5-monophosphate dehydrogenase 676326-677960 - 544 17934592 groEL Atu0682 - COG0459O chaperonin GroEL 678036-678332 - 98 17934593 groES Atu0683 - COG0234O co-chaperonin GroES 683907-684545 + 212 17934597 - Atu0687 - - hypothetical protein 717654-718139 + 161 17934627 atpF Atu0717 - - ATP synthase subunit B 872847-873449 + 200 17934784 sodF Atu0876 - COG0605P superoxide dismutase 966008-967579 + 523 17934885 dop Atu0977 - COG0265O serine protease DO-like protease 1074581-1076077 - 498 17934991 dnaC Atu1084 - COG0305L replicative DNA helicase 1079951-1080526 - 191 17934995 csn1 Atu1088 - COG0359J 50S ribosomal protein L9 1081662-1081910 - 82 17934997 rpsR Atu1090 - - 30S ribosomal protein S18 1113299-1113721 + 140 17935029 ndk Atu1122 - - nucleoside diphosphate kinase 1129534-1130607 - 357 17935048 garS Atu1141 - COG0150F phosphoribosylaminoimidazole synthetase 1138515-1139873 - 452 17935055 - Atu1148 - COG4222S hypothetical protein 1157444-1157956 + 170 17935070 mucS Atu1163 - COG1846K exopolysaccharide II synthesis transcriptional activator ExpG 1160016-1161305 + 429 17935072 glyA Atu1165 - COG0112E serine hydroxymethyltransferase 1201704-1202321 - 205 17935113 acpD Atu1208 - COG1182I acyl-carrier-protein phosphodiesterase 1235944-1236411 - 155 17935149 rpsI Atu1246 - - 30S ribosomal protein S9 1236414-1236878 - 154 17935150 rplM Atu1247 - - 50S ribosomal protein L13 1247100-1248377 + 425 17935162 clpX Atu1259 - COG1219O ATP-dependent protease ATP-binding subunit 1258121-1259311 + 396 17935172 nouD Atu1272 - COG0649C NADH dehydrogenase delta subunit 1308820-1310301 + 493 17935219 gatA Atu1319 - - glutamyl-tRNA amidotransferase subunit A 1312364-1313869 + 501 17935224 gatB Atu1324 - COG0064J aspartyl/glutamyl-tRNA amidotransferase subunit B 1367915-1368682 + 255 17935274 rpsB Atu1374 - - 30S ribosomal protein S2 1369042-1369968 + 308 17935275 tsf Atu1375 - - elongation factor Ts 1385097-1386386 - 429 17935292 cisY Atu1392 - COG0372C citrate synthase 1421593-1422774 + 393 17935326 eno Atu1426 - COG0148G enolase 1426482-1427699 + 405 17935332 aceF Atu1432 - COG0508C dihydrolipoamide acetyltransferase 1517128-1517454 + 108 17935424 - Atu1525 - COG5455S hypothetical protein 1581486-1581770 - 94 17935496 acpP Atu1600 - COG0236IQ acyl carrier protein 1591906-1593282 - 458 17935506 dhs Atu1610 - - 2-dehydro-3-deoxyphosphoheptonate aldolase 1635813-1638143 + 776 17935547 maeB Atu1652 - COG0280C,COG0281C phosphate acetyltransferase 1650612-1652090 - 492 17935559 tig Atu1664 - COG0544O trigger factor 1655785-1656912 + 375 17935564 adhC Atu1670 - COG1062C alcohol dehydrogenase class III 1666935-1667444 - 169 17935573 ppiB Atu1679 - COG0652O peptidyl prolyl cis-trans isomerase 1669637-1671529 + 630 17935580 ppiD Atu1686 - COG0760O peptidyl-prolyl cis-trans isomerse D 1672583-1673398 + 271 17935582 trpC Atu1688 - COG0134E indole-3-glycerol-phosphate synthase 1717234-1721052 + 1272 17935626 nrdE Atu1733 - COG0209F ribonucleotide-diphosphate reductase alpha subunit 1742294-1742902 + 202 17935650 - Atu1757 - COG3672S hypothetical protein 1754155-1755564 + 469 17935663 glnA Atu1770 - - glutamine synthetase I 1775206-1776279 - 357 17935682 - Atu1789 - COG1744R lipoprotein 1802191-1802946 - 251 17935713 sufC Atu1823 - COG0396O ABC transporter, nucleotide binding/ATPase protein 1803019-1804488 - 489 17935714 sufB Atu1824 - - ABC transporter subunit 1824772-1825536 + 254 17935733 purC Atu1843 - - phosphoribosylaminoimidazole-succinocarboxamide synthase 1825591-1825833 + 80 17935734 - Atu1844 - COG1828F phosphoribosylformylglycinamidine synthase 1825901-1826524 + 207 17935735 purQ Atu1845 - COG0047F phosphoribosylformylglycinamidine synthase subunit I 1839600-1840217 - 205 17935750 rpsD Atu1860 - COG0522J 30S ribosomal protein S4 1848041-1849408 + 455 17935760 icdA Atu1870 - COG0538C isocitrate dehydrogenase 1859937-1860710 + 257 17935769 - Atu1879 - COG0834ET ABC transporter, substrate binding protein [amino acid] 1875735-1876664 - 309 17935789 rbsB Atu1899 - COG1879G ABC transporter, substrate binding protein [ribose] 1906515-1907084 - 189 17935819 rpsE Atu1929 - COG0098J 30S ribosomal protein S5 1910625-1910825 - 66 17935828 rpmC Atu1938 - - 50S ribosomal protein L29 1915939-1917114 - 391 17935838 tuf Atu1948 - COG0050J elongation factor Tu 1917181-1919280 - 699 17935839 fusA Atu1949 - COG0480J elongation factor EF-2 1919863-1920234 - 123 17935841 rpsL Atu1951 - - 30S ribosomal protein S12 1920762-1921055 + 97 17935842 - Atu1952 - - hypothetical protein 1922718-1926926 - 1402 17935845 rpoC Atu1955 - COG0086K DNA-directed RNA polymerase beta' subunit 1927108-1931244 - 1378 17935846 rpoB Atu1956 - COG0085K DNA-directed RNA polymerase beta subunit 1931508-1931885 - 125 17935847 rplL Atu1957 - COG0222J 50S ribosomal protein L7/L12 1932820-1933515 - 231 17935849 rplA Atu1959 - - 50S ribosomal protein L1 1934095-1934625 - 176 17935851 nusG Atu1961 - COG0250K transcription antitermination protein NusG 1936292-1937467 - 391 17935855 tuf Atu1966 - COG0050J elongation factor Tu 1967366-1967821 + 151 17935891 - Atu2004 - - hypothetical protein 1979902-1980921 - 339 17935905 ilvC Atu2019 - COG0059EH ketol-acid reductoisomerase 1983117-1984163 + 348 17935908 adh Atu2022 - COG1064R NADP-dependent alcohol dehydrogenase 2111571-2112677 + 368 17936031 - Atu2147 - COG1840P ABC transporter, substrate binding protein 2134443-2136497 - 684 17936050 rpoD Atu2167 - COG0568K RNA polymerase sigma factor 2150582-2154070 + 1162 17936061 carB Atu2178 - COG0458EF carbamoyl-phosphate synthase large subunit 2198642-2199250 + 202 17936110 rplY Atu2227 - COG1825J 50S ribosomal protein L25 2204549-2205652 + 367 17936116 - Atu2233 - COG0012J GTP-binding protein 2224205-2225215 + 336 17936136 moxR Atu2253 - COG0714R MoxR family protein 2242982-2243587 - 201 17936153 clpP Atu2270 - COG0740OU ATP-dependent Clp protease proteolytic subunit 2247300-2248406 - 368 17936159 braC Atu2276 - COG0683E ABC transporter, substrate binding protein [branched chain amino acid] 2310525-2312033 + 502 17936216 rhlE Atu2333 - COG0513LKJ dead-box ATP-dependent RNA helicase 2325566-2326630 - 354 17936231 chvE Atu2348 - COG4213G sugar binding protein 2386395-2387429 + 344 17936298 glnA Atu2416 - - glutamine synthetase II 2394416-2395534 - 372 17936304 - Atu2422 - COG0683E ABC transporter, substrate binding protein [amino acid] 2437719-2438663 + 314 17936351 - Atu2469 - COG3181S hypothetical protein 2445313-2445801 + 162 17936359 dps Atu2477 - COG0783P DNA protection during starvation conditions 2458889-2459923 - 344 17936371 asd Atu2490 - COG0136E aspartate-semialdehyde dehydrogenase 2479427-2480293 + 288 17936392 dat Atu2511 - COG0115EH D-amino acid aminotransferase 2527004-2527573 - 189 17936428 chvH Atu2553 - COG0231J elongation factor P 2604627-2606081 - 484 17936497 atpD Atu2622 - COG0055C ATP synthase subunit B 2607015-2608544 - 509 17936499 atpA Atu2624 - COG0056C ATP synthase subunit A 2619386-2622436 - 1016 17936511 sucA Atu2636 - COG0567C oxoglutarate dehydrogenase E1 component 2622558-2623460 - 300 17936512 sucD Atu2637 - COG0074C succinyl-CoA synthetase alpha subunit 2623478-2624671 - 397 17936513 sucC Atu2638 - COG0045C succinyl-CoA synthetase subunit beta 2624705-2625667 - 320 17936514 mdh Atu2639 - COG0039C malate dehydrogenase 2643727-2644260 - 177 17936536 ppa Atu2661 - COG0221C inorganic pyrophosphatase 2645152-2646972 - 606 17936538 typA Atu2663 - COG1217T GTP-binding tyrosin phosphorylated protein 2651145-2652368 - 407 17936542 argG Atu2667 - COG0137E argininosuccinate synthase 2656136-2657089 - 317 17936547 - Atu2672 - COG2984R hypothetical protein 2686644-2687183 + 179 17936578 rplS Atu2703 - - 50S ribosomal protein L19 2741112-2742119 + 335 17936619 - Atu2744 - COG1638G C4-dicarboxylate binding protein 2788830-2789144 - 104 17936660 rplU Atu2785 - - 50S ribosomal protein L21 2820018-2820959 - 313 17936692 rbsB Atu2817 - COG1879G ABC transporter, substrate binding protein [ribose] 325124-326470 + 448 17937009 dctA Atu3298 - COG1301C C4-dicarboxylate transport protein 567249-569957 + 902 17937228 secA Atu3520 - COG0653U translocase 649667-650413 + 248 17937302 etfB Atu3595 - COG2086C electron transfer flavoprotein beta subunit 681785-682738 + 317 17937337 accA Atu3630 - COG0825I acetyl-CoA carboxylase alpha subunit 785346-786941 - 531 17937411 serA Atu3706 - COG0111HE D-3-phosphoglycerate dehydrogenase 795612-796145 - 177 17937418 palA Atu3713 - COG2885M omp16 protein 808398-809144 - 248 17937432 - Atu3727 - - hypothetical protein 815065-817047 + 660 17937441 tktA Atu3736 - COG0021G transketolase 817110-818120 + 336 17937442 gapA Atu3737 - COG0057G glyceraldehyde-3-phosphate dehydrogenase 1222748-1224448 + 566 17937799 rpsA Atu4104 - COG0539J 30S ribosomal protein S1 1232016-1233620 + 534 17937808 dppA Atu4113 - COG0747E ABC transporter, substrate binding protein [dipeptide] 1556565-1558478 - 637 17938104 - Atu4415 - COG3211R hypothetical protein 1573830-1575467 + 545 17938120 - Atu4431 - COG0747E ABC transporter, substrate binding protein [oligopeptide] 1606680-1607645 + 321 17938153 talB Atu4464 - - transaldolase 1614820-1616319 - 499 17938162 lysS Atu4473 - COG1190J lysyl-tRNA synthetase 1628609-1629919 + 436 17938172 xylA Atu4483 - COG2115G xylose isomerase 1635017-1635796 + 259 17938178 - Atu4489 - COG1464P outer membrane lipoprotein 1648765-1649892 - 375 17938191 cobW Atu4502 - COG0523R hypothetical protein 1836906-1837712 + 268 17938367 - Atu4678 - COG0834ET ABC transporter, substrate binding protein [amino acid]