Bacteroides fragilis YCH46, complete genome - 1..5277274 Location Strand Length PID Gene Synonym Code COG Product 26885-27463 + 192 53711312 - BF0021 - COG1592C rubrerythrin 50018-50251 + 77 53711335 - BF0044 - - hypothetical protein 69202-70494 + 430 53711359 - BF0068 - COG0162J tyrosyl-tRNA synthetase 222190-222480 + 96 53711495 - BF0204 - - hypothetical protein 241654-242916 - 420 53711510 - BF0219 - COG0304IQ 3-oxoacyl-[acyl-carrier-protein] synthase II 242932-243168 - 78 53711511 - BF0220 - COG0236IQ acyl carrier protein 285515-286777 + 420 53711553 - BF0262 - COG0195K transcription elongation factor NusA 286898-289945 + 1015 53711554 infB BF0263 - COG0532J translation initiation factor IF-2 320496-322010 + 504 53711583 - BF0292 - COG0696G phosphoglyceromutase 331331-331585 - 84 53711589 - BF0298 - COG0268J ribosomal protein S20 387509-390712 + 1067 53711631 - BF0340 - COG4206H putative outer membrane protein probably involved in nutrient binding 390719-392572 + 617 53711632 - BF0341 - - putative outer membrane protein 412854-413147 + 97 53711647 - BF0356 - - hypothetical protein 483397-484938 + 513 53711703 - BF0412 - COG0423J glycyl-tRNA synthetase 534683-536125 + 480 53711745 - BF0454 - COG0076E glutamate decarboxylase 557297-558316 + 339 53711769 - BF0478 - COG0280C phosphate acetyltransferase 558335-559531 + 398 53711770 - BF0479 - COG0282C acetate kinase 564572-565138 - 188 53711777 - BF0486 - COG0231J elongation factor P 577897-578406 - 169 53711793 - BF0502 - - putative outer membrane protein OmpH 646767-647120 - 117 53711854 - BF0563 - - 50S ribosomal protein L19 703656-703826 - 56 53711888 - BF0597 - - ferredoxin 773732-774589 + 285 53711952 - BF0662 - COG1196D hypothetical protein 777783-780965 - 1060 53711956 - BF0666 - COG4206H,COG4771P putative outer membrane protein probably involved in nutrient binding 783233-786031 + 932 53711958 - BF0668 - COG4771P putative outer membrane protein probably involved in nutrient binding 798810-800456 + 548 53711966 - BF0676 - COG1838C anaerobic fumarate hydratase class I 838887-839201 + 104 53712002 - BF0713 - COG0526OC thioredoxin 887593-888276 - 227 53712042 - BF0749 - - hypothetical protein 971279-971509 + 76 53712112 - BF0819 - - putative acyl carrier protein 1094260-1095204 - 314 53712211 hemH BF0918 - - phosphoribosylaminoimidazole-succinocarboxamide synthase 1110343-1111737 - 464 53712224 - BF0931 - COG0673R putative oxidoreductase 1129639-1131276 - 545 53712235 - BF0943 - - putative outer membrane protein probably involved in nutrient binding 1131298-1134615 - 1105 53712236 - BF0944 - COG4771P,COG1629P putative outer membrane protein probably involved in nutrient binding 1134926-1136686 - 586 53712237 - BF0945 - - putative outer membrane protein probably involved in nutrient binding 1148335-1151718 + 1127 53712244 - BF0952 - COG1629P putative outer membrane protein probably involved in nutrient binding 1151737-1153521 + 594 53712245 - BF0953 - - putative outer membrane protein probably involved in nutrient binding 1158196-1158879 - 227 53712249 - BF0957 - - hypothetical protein 1166858-1167859 - 333 53712259 - BF0967 - COG0057G glyceraldehyde 3-phosphate dehydrogenase 1176855-1177712 + 285 53712264 - BF0972 - COG0623I enoyl-[acyl-carrier-protein] reductase 1188459-1189271 + 270 53712276 - BF0984 - COG0363G glucosamine-6-phosphate deaminase 1217761-1218030 - 89 53712301 - BF1009 - - 50S ribosomal protein L27 1218053-1218370 - 105 53712302 - BF1010 - - 50S ribosomal protein L21 1254026-1255819 + 597 53712335 - BF1043 - COG0539J 30S ribosomal protein S1 1295944-1297269 + 441 53712366 - BF1074 - - hypothetical protein 1299271-1301409 + 712 53712369 - BF1077 - - peptidyl-prolyl cis-trans isomerase 1307368-1307748 + 126 53712376 - BF1084 - COG1314U putative protein-export membrane protein 1344043-1344612 + 189 53712412 adk BF1120 - COG0563F adenylate kinase 1350473-1350670 - 65 53712419 - BF1127 - - hypothetical protein 1428385-1430001 + 538 53712485 - BF1193 - - hypothetical protein 1432055-1432645 - 196 53712489 - BF1197 - COG1825J putative 50S ribosomal protein L25 1432790-1433176 - 128 53712490 - BF1198 - - hypothetical protein 1434318-1434644 + 108 53712492 - BF1200 - COG1862U hypothetical protein 1436306-1436722 + 138 53712495 - BF1203 - - hypothetical protein 1446725-1447918 - 397 53712507 - BF1215 - COG1748E hypothetical protein 1456164-1458083 + 639 53712517 dnaK BF1225 - COG0443O molecular chaperone DnaK 1536843-1537979 - 378 53712590 - BF1298 - COG2885M putative outer membrane protein 1720997-1722742 + 581 53712771 - BF1478 - COG1109G phosphoglucomutase phosphomannomutase 1783946-1784347 + 133 53712827 - BF1535 - COG1898M hypothetical protein 1804580-1804855 - 91 53712845 - BF1553 - - DNA-binding protein HU 1917684-1918838 - 384 53712943 - BF1653 - COG0153G galactokinase 1918874-1920199 - 441 53712944 - BF1654 - COG0738G glucose/galactose transporter 1923308-1923517 - 69 53712949 - BF1659 - - hypothetical protein 1926174-1926671 + 165 53712952 - BF1662 - - hypothetical protein 1941813-1944026 - 737 53712965 - BF1675 - - hypothetical protein 1948488-1949564 + 358 53712969 - BF1680 - - hypothetical protein 1950443-1951561 + 372 53712971 - BF1682 - COG2885M major outer membrane protein OmpA 1956457-1958397 + 646 53712976 - BF1687 - COG0441J threonyl-tRNA synthetase 1958516-1959127 + 203 53712977 infC BF1688 - COG0290J translation initiation factor IF-3 1959491-1959841 + 116 53712979 - BF1690 - - 50S ribosomal protein L20 1978557-1979474 + 305 53712995 - BF1706 - COG0329EM probable N-acetylneuraminate lyase 2031257-2033581 + 774 53713023 - BF1734 - COG3525G beta-N-acetylhexosaminidase 2050558-2051145 - 195 53713032 - BF1743 - COG0576O GrpE protein 2062976-2064607 + 543 53713042 - BF1753 - - putative outer membrane protein probably involved in nutrient binding 2332117-2334906 + 929 53713281 - BF1991 - COG1629P putative TonB-dependent outer membrane protein 2363718-2364395 + 225 53713302 - BF2013 - COG2869C Na(+)-translocating NADH-quinone reductase subunit C 2545818-2546174 - 118 53713470 - BF2181 - COG0526OC thioredoxin 2611141-2611878 + 245 53713527 - BF2238 - - hypothetical protein 2629149-2630036 - 295 53713547 - BF2258 - COG0331I malonyl CoA-acyl carrier protein transacylase 2640895-2641140 + 81 53713556 - BF2267 - COG0724R RNA binding protein 2657315-2657869 - 184 53713572 - BF2283 - - hypothetical protein 2760853-2761677 + 274 53713681 - BF2390 - COG1579R hypothetical protein 2790670-2791881 + 403 53713703 - BF2412 - - putative tetratricopeptide repeat family protein 2801441-2802436 - 331 53713713 - BF2422 - COG0714R magnesium chelatase subunit I 2807071-2807259 - 62 53713719 - BF2427.1 - COG0267J 50S ribosomal protein L33 2815133-2816626 - 497 53713725 - BF2434 - COG0442J prolyl-tRNA synthetase 2916356-2916868 - 170 53713827 - BF2536 - - hypothetical protein 2941322-2941522 - 66 53713848 - BF2557 - - hypothetical protein 2969411-2969893 - 160 53713876 - BF2584 - - conserved hypothetical protein UpxZ homolog 2980323-2981357 - 344 53713884 - BF2592 - COG1087M putative UDP-glucose 4-epimerase 2989688-2991289 + 533 53713894 - BF2602 - COG0504F CTP synthetase 3009167-3009970 - 267 53713909 - BF2617 - COG4105R hypothetical protein 3118581-3119126 + 181 53714008 rpsP BF2716 - - 30S ribosomal protein S16 3121075-3121443 - 122 53714011 - BF2719 - COG0724R putative RNA-binding protein 3126282-3127385 + 367 53714016 - BF2724 - COG0526OC thiol:disulfide interchange protein 3128278-3130842 - 854 53714018 - BF2726 - COG0058G alpha-glucan phosphorylase 3139699-3140289 - 196 53714026 - BF2734 - COG1390C ATP synthase subunit E 3394070-3395257 + 395 53714278 - BF2988 - COG0156H 2-amino-3-ketobutyrate coenzyme A ligase 3503154-3504797 - 547 53714387 - BF3100 - COG0205G diphosphate--fructose-6-phosphate 1-phosphotransferase 3584797-3585078 - 93 53714450 - BF3163 - - hypothetical protein 3588342-3588728 - 128 53714454 - BF3167 - - hypothetical protein 3601590-3602147 - 185 53714465 - BF3178 - COG1592C putative rubrerythrin 3602758-3603105 - 115 53714467 - BF3180 - COG3152S putative aminopeptidase C 3631371-3631598 - 75 53714490 - BF3203 - - hypothetical protein 3633364-3634065 + 233 53714493 - BF3206 - COG0822C hypothetical protein 3634086-3635096 + 336 53714494 - BF3207 - - hypothetical protein 3672418-3673011 - 197 53714524 - BF3237 - COG2825M hypothetical protein 3718949-3720208 + 419 53714555 - BF3269 - - phosphoglycerate kinase 3737763-3738167 + 134 53714574 - BF3288 - COG0346E lactoylglutathione lyase and related protein 3750977-3751981 - 334 53714585 - BF3299 - COG0191G fructose-bisphosphate aldolase 3753562-3753813 + 83 53714587 - BF3301 - COG0254J 50S ribosomal protein L31 3801887-3805441 + 1184 53714618 - BF3332 - COG1014C,COG0674C,COG1013C pyruvate-flavodoxin oxidoreductase 3820730-3822307 - 525 53714632 - BF3346 - - M-like protein 3843228-3844412 + 394 53714650 - BF3364 - COG3579E aminopeptidase C 3881130-3882767 - 545 53714681 groEL BF3395 - COG0459O chaperonin GroEL 3882810-3883082 - 90 53714682 groES BF3396 - COG0234O co-chaperonin GroES 3915984-3916448 - 154 53714711 - BF3426 - - AraC/XylS family transcriptional regulator 3933084-3934094 - 336 53714725 - BF3440 - COG0451MG putative UDP-glucuronic acid epimerase 3936303-3937037 - 244 53714728 - BF3443 - COG0463M dolichol-phosphate mannosyltransferase 3943880-3944152 - 90 53714734 - BF3449 - - hypothetical protein 3950778-3951290 + 170 53714735 - BF3450 - COG2406R hypothetical protein 3972294-3972461 + 55 53714760 - BF3475 - - hypothetical protein 4009574-4010038 - 154 53714793 - BF3508 - COG2030I hypothetical protein 4086668-4086844 - 58 53714859 - BF3574 - - hypothetical protein 4101651-4101965 + 104 53714875 - BF3590 - - hypothetical protein 4115865-4117199 + 444 53714892 - BF3607 - COG0334E glutamate dehydrogenase 4212699-4213316 - 205 53714988 - BF3703 - - hypothetical protein 4228845-4229120 + 91 53715003 - BF3718 - - hypothetical protein 4246673-4247137 - 154 53715023 - BF3739 - COG0848U hypothetical protein 4247137-4247727 - 196 53715024 - BF3740 - - hypothetical protein 4247764-4248234 - 156 53715025 - BF3741 - - hypothetical protein 4248241-4249062 - 273 53715026 - BF3742 - COG0811U putative biopolymer transport protein 4268001-4269044 - 347 53715042 - BF3758 - COG0059EH ketol-acid reductoisomerase 4285428-4286018 + 196 53715054 - BF3770 - COG1047O peptidyl-prolyl cis-trans isomerase 4292513-4294042 - 509 53715060 - BF3776 - - hypothetical protein 4312734-4312892 + 52 53715070 - BF3786 - - hypothetical protein 4330985-4333132 - 715 53715084 - BF3800 - COG2185I methylmalonyl-CoA mutase 4400914-4401132 + 72 53715142 - BF3858 - - hypothetical protein 4401456-4401899 - 147 53715144 - BF3860 - COG0359J 50S ribosomal protein L9 4401911-4402183 - 90 53715145 - BF3861 - - 30S ribosomal protein S18 4402186-4402530 - 114 53715146 rpsF BF3862 - COG0360J 30S ribosomal protein S6 4511582-4512337 - 251 53715240 tpiA BF3956 - COG0149G triosephosphate isomerase 4542207-4542581 - 124 53715260 - BF3976 - COG3682K putative transcriptional regulator 4546190-4547131 - 313 53715262 - BF3978 - COG0039C malate dehydrogenase 4579984-4580976 - 330 53715294 tsf BF4010 - - elongation factor Ts 4581100-4581936 - 278 53715295 - BF4011 - - 30S ribosomal protein S2 4582057-4582443 - 128 53715296 rpsI BF4012 - - 30S ribosomal protein S9 4582450-4582911 - 153 53715297 - BF4013 - - 50S ribosomal protein L13 4583891-4585294 - 467 53715300 - BF4016 - COG0017J asparaginyl-tRNA synthetase 4585401-4586801 - 466 53715301 - BF4017 - COG1187J ribosomal large subunit pseudouridine synthase B 4661937-4663292 - 451 53715363 - BF4079 - COG0544O FKBP-type peptidyl-prolyl cis-transisomerase 4664532-4664777 + 81 53715366 - BF4082 - COG0724R putative RNA-binding protein RbpA 4671736-4671921 - 61 53715374 - BF4090 - COG0333J 50S ribosomal protein L32 (Ribosomal protein I) 4671935-4672471 - 178 53715375 - BF4091 - COG1399R hypothetical protein 4689958-4691481 - 507 53715385 purH BF4101 - - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4699132-4700034 - 300 53715391 - BF4107 - - hypothetical protein 4714366-4714527 + 53 53715399 - BF4115 - - hypothetical protein 4715672-4716418 - 248 53715402 - BF4118 - COG1028IQR 3-oxoacyl-[acyl-carrier protein] reductase 4730273-4731085 - 270 53715418 - BF4134 - COG0811U MotA/TolQ/ExbB proton channel 4760871-4761356 - 161 53715438 - BF4154 - COG0203J 50S ribosomal protein L17 4761360-4762352 - 330 53715439 - BF4155 - COG0202K DNA-directed RNA polymerase alpha subunit 4762364-4762969 - 201 53715440 - BF4156 - COG0522J 30S ribosomal protein S4 4763089-4763478 - 129 53715441 - BF4157 - COG0100J 30S ribosomal protein S11 4763490-4763870 - 126 53715442 - BF4158 - COG0099J 30S ribosomal protein S13 4765063-4766409 - 448 53715446 - BF4161 - COG0201U preprotein translocase SecY 4766414-4766860 - 148 53715447 - BF4162 - COG0200J 50S ribosomal protein L15 4766891-4767067 - 58 53715448 - BF4163 - COG1841J 50S ribosomal protein L30 4767078-4767596 - 172 53715449 - BF4164 - COG0098J 30S ribosomal protein S5 4767602-4767946 - 114 53715450 - BF4165 - COG0256J 50S ribosomal protein L18 4767968-4768537 - 189 53715451 - BF4166 - COG0097J 50S ribosomal protein L6 4768553-4768948 - 131 53715452 - BF4167 - - 30S ribosomal protein S8 4769003-4769302 - 99 53715453 - BF4168 - COG0199J chloroplast 30S ribosomal protein S14 4769309-4769866 - 185 53715454 rplE BF4169 - COG0094J 50S ribosomal protein L5 4769866-4770186 - 106 53715455 rplX BF4170 - COG0198J 50S ribosomal protein L24 4771502-4772236 - 244 53715460 - BF4175 - COG0092J 30S ribosomal protein S3 4772688-4772957 - 89 53715462 rpsS BF4177 - COG0185J 30S ribosomal protein S19 4772978-4773802 - 274 53715463 - BF4178 - COG0090J 50S ribosomal protein L2 4773808-4774098 - 96 53715464 - BF4179 - COG0089J 50S ribosomal protein L23 4774115-4774741 - 208 53715465 - BF4180 - - 50S ribosomal protein L4 4774741-4775358 - 205 53715466 rplC BF4181 - - 50S ribosomal protein L3 4775377-4775682 - 101 53715467 - BF4182 - COG0051J 30S ribosomal protein S10 4775764-4777881 - 705 53715468 - BF4183 - COG0480J elongation factor EF-2 4777935-4778411 - 158 53715469 - BF4184 - COG0049J 30S ribosomal protein S7 4778571-4778972 - 133 53715470 - BF4185 - - 30S ribosomal protein S12 4782457-4786740 - 1427 53715476 - BF4191 - COG0086K DNA-directed RNA polymerase beta' subunit 4786887-4790699 - 1270 53715477 - BF4192 - COG0085K DNA-directed RNA polymerase beta subunit 4790804-4791178 - 124 53715478 - BF4193 - COG0222J 50S ribosomal protein L7/L12 4791227-4791739 - 170 53715479 - BF4194 - COG0244J 50S ribosomal protein L10 4791755-4792453 - 232 53715480 - BF4195 - - 50S ribosomal protein L1 4793864-4795048 - 394 53715484 tuf BF4199 - COG0050J elongation factor Tu 4796883-4797074 - 63 53715487 - BF4202 - - 30S ribosomal protein S21 4809648-4810226 - 192 53715496 - BF4211 - - hypothetical protein 4875768-4875989 - 73 53715558 - BF4275 - - hypothetical protein 4920893-4921297 - 134 53715603 - BF4323 - COG0537FGR histidine triad (HIT) family protein 4923341-4925467 + 708 53715606 - BF4326 - COG1185J polyribonucleotide nucleotidyltransferase 4952333-4952494 + 53 53715630 - BF4350 - COG1773C rubredoxin 5061691-5064714 + 1007 53715707 - BF4428 - COG0342U protein-export membrane protein SecD/SecF 5088646-5090253 + 535 53715725 - BF4446 - COG1866C phosphoenolpyruvate carboxykinase 5091472-5094750 + 1092 53715727 - BF4448 - COG1629P,COG4771P putative outer membrane protein probably involved in nutrient binding 5094763-5096763 + 666 53715728 - BF4449 - - putative outer membrane protein probably involved in nutrient binding 5121409-5121678 + 89 53715743 - BF4464 - - 30S ribosomal protein S15 5141247-5141579 - 110 53715758 - BF4479 - COG0858J ribosome-binding factor A 5145719-5147380 + 553 53715764 - BF4485 - - hypothetical protein 5182458-5183321 + 287 53715794 - BF4515 - COG0545O peptidylprolyl isomerase