Cytophaga hutchinsonii ATCC 33406, complete genome - 1..4433218 Location Strand Length PID Gene Synonym Code COG Product 5690-6469 - 259 110636434 - CHU_0007 - - hypothetical protein 21575-22576 + 333 110636447 rfbA CHU_0020 - - glucose-1-phosphate thymidyltransferase 39658-40038 + 126 110636457 gcvH CHU_0030 - - glycine cleavage system H protein 49986-50528 + 180 110636466 - CHU_0039 - - hypothetical protein 72222-73334 + 370 110636486 gmd CHU_0059 - - GDP-D-mannose dehydratase 95289-95480 + 63 110636506 cspC CHU_0079 - - cold shock protein 107050-108444 + 464 110636517 - CHU_0090 - - hypothetical protein 109885-110205 - 106 110636520 trxA CHU_0093 - - thioredoxin 115849-116007 + 52 110636523 rpmH CHU_0096 - - 50S ribosomal protein L34 131298-131927 - 209 110636534 sodA CHU_0108 - - superoxide dismutase, manganese 137665-140640 - 991 110636539 secDF CHU_0113 - - secDF-export membrane protein; gliding motility-related protein 142558-143085 + 175 110636543 rpsP CHU_0117 - - 30S ribosomal protein S16 144449-144823 + 124 110636546 rplS CHU_0120 - - 50S ribosomal protein L19 148784-150754 + 656 110636551 pal CHU_0125 - - outer membrane protein, peptidoglycan-associated lipoprotein 167259-168251 - 330 110636565 asd CHU_0139 - - aspartate-semialdehyde dehydrogenase 212063-213097 + 344 110636596 gldK CHU_0171 - - gliding motility-related protein 213170-213955 + 261 110636597 gldL CHU_0172 - - gliding motility-related protein 214013-215608 + 531 110636598 gldM CHU_0173 - - gliding motility-related protein 215626-216486 + 286 110636599 - CHU_0174 - - gliding related protein; possible gldN and/or gldO 224856-225095 + 79 110636605 atpE CHU_0180 - - ATP synthase, subunit C (H(+)-transporting two-sector ATPase) 226248-227828 + 526 110636608 atpA CHU_0183 - - ATP synthase, subunit alpha (H(+)-transporting two-sector ATPase) 242562-245198 + 878 110636623 ybiL CHU_0198 - - probable outer membrane receptor for iron transport 370739-371926 + 395 110636733 - CHU_0309 - - hypothetical protein 403833-405338 + 501 110636759 atpD CHU_0336 - - H(+)-transporting two-sector ATPase, beta subunit 452190-452645 - 151 110636803 - CHU_0380 - - hypothetical protein 461993-462481 - 162 110636815 - CHU_0392 - - hypothetical protein 531694-531963 + 89 110636876 rpmA CHU_0454 - - 50S ribosomal protein L27 550234-551265 - 343 110636891 - CHU_0469 - - sterol desaturase-related protein 560315-561151 - 278 110636901 - CHU_0479 - - hypothetical protein 570305-570547 + 80 110636911 rpmE CHU_0489 - - 50S ribosomal protein L31 581333-582361 + 342 110636922 - CHU_0500 - - hypothetical protein 711852-713159 - 435 110637030 sahH CHU_0610 - - S-adenosylhomocysteine hydrolase 738730-739635 - 301 110637056 cysD CHU_0636 - - sulfate adenylyltransferase, subunit 2 744176-744769 - 197 110637064 - CHU_0644 - - hypothetical protein 744774-745250 - 158 110637065 - CHU_0645 - - hypothetical protein 790584-790733 - 49 110637110 - CHU_0690 - - hypothetical protein 799504-799917 + 137 110637121 - CHU_0701 - - hypothetical protein 818445-819551 - 368 110637139 pheB CHU_0719 - - 3-deoxy-7-phosphoheptulonate synthase 827991-828164 + 57 110637150 - CHU_0730 - - hypothetical protein 886146-887357 - 403 110637204 aspB CHU_0784 - - aspartate transaminase 898805-899272 - 155 110637217 ftnA CHU_0797 - - ferritin-like protein 967137-967376 + 79 110637259 - CHU_0843 - - hypothetical protein 979178-979363 - 61 110637272 - CHU_0856 - - hypothetical protein 1099872-1100777 - 301 110637362 - CHU_0952 - - hypothetical protein 1118627-1119034 - 135 110637382 - CHU_0972 - - hypothetical protein 1135833-1136150 - 105 110637400 - CHU_0990 - - hypothetical protein 1158087-1158269 + 60 110637418 - CHU_1008 - - hypothetical protein 1322928-1324406 - 492 110637557 ilvC CHU_1149 - - ketol-acid reductoisomerase 1324400-1324567 + 55 110637556 - CHU_1148 - - hypothetical protein 1417496-1418728 - 410 110637634 icd CHU_1228 - - isocitrate dehydrogenase 1487241-1489484 + 747 110637681 - CHU_1276 - - hypothetical protein 1489566-1491320 + 584 110637682 - CHU_1277 - - hypothetical protein 1492501-1493628 + 375 110637684 - CHU_1279 - - hypothetical protein; possibly endoglucanase related 1493783-1495498 + 571 110637685 cel CHU_1280 - - possible endoglucanase, glycoside hydrolase family 9 protein 1499565-1499990 + 141 110637689 - CHU_1284 - - hypothetical protein 1504141-1504302 + 53 110637693 - CHU_1288 - - hypothetical protein 1519865-1521412 - 515 110637714 - CHU_1309 - - TPR repeat-containing protein 1523055-1523234 + 59 110637716 - CHU_1311 - - hypothetical protein 1585025-1585627 - 200 110637767 tolA CHU_1362 - - membrane spanning protein, required for outer membrane integrity 1604842-1605222 - 126 110637787 nuoA CHU_1382 - - NADH dehydrogenase I chain A 1621715-1621951 - 78 110637802 acpP CHU_1398 - - acyl carrier protein 1622602-1624014 + 470 110637804 pykF CHU_1400 - - pyruvate kinase I 1650478-1650891 - 137 110637824 - CHU_1420 - - hypothetical protein 1656371-1656724 - 117 110637834 - CHU_1430 - - hypothetical protein 1667226-1667429 - 67 110637844 - CHU_1440 - - transposase 1724315-1724554 + 79 110637900 - CHU_1496 - - hypothetical protein 1737666-1738028 - 120 110637910 - CHU_1506 - - cation-transporting ATPase 1751988-1752941 + 317 110637921 accA CHU_1517 - - acetyl-CoA carboxylase, carboxytransferase component, alpha subunit 1805812-1806936 + 374 110637953 dnaN CHU_1549 - - DNA polymerase III, beta-subunit 1864233-1864727 + 164 110637994 - CHU_1591 - - hypothetical protein 1869807-1870568 - 253 110637998 - CHU_1595 - - fatty acid desaturase (stearoyl-CoA desaturase) 1872033-1873775 - 580 110638001 deaD CHU_1598 - - ATP-dependent RNA helicase (cold-shock DEAD-box protein A) 1886240-1887877 + 545 110638011 - CHU_1608 - - hypothetical protein 1888903-1889583 - 226 110638013 - CHU_1610 - - hypothetical protein 1900669-1901163 - 164 110638025 accB CHU_1623 - - biotin carboxyl carrier protein of acetyl-CoA carboxylase 1908702-1909178 + 158 110638033 greA CHU_1631 - - transcription elongation factor 1928766-1929113 + 115 110638047 rplT CHU_1645 - - 50S ribosomal protein L20 1952990-1953286 + 98 110638066 - CHU_1665 - - hypothetical protein 2006118-2007458 + 446 110638105 tig CHU_1705 - - peptidyl-prolyl cis-trans isomerase, trigger factor 2013941-2014090 + 49 110638112 - CHU_1712 - - hypothetical protein 2027912-2028286 - 124 110638123 - CHU_1723 - - hypothetical protein 2036868-2037887 - 339 110638134 glnA CHU_1734 - - glutamine synthetase 2045822-2046616 - 264 110638139 - CHU_1739 - - hypothetical protein 2053121-2053873 - 250 110638144 - CHU_1744 - - hypothetical protein 2061080-2062744 - 554 110638155 pdhC CHU_1755 - - dihydrolipoyllysine-residue acetyltransferase (dihydrolipoamide S-acetyltransferase) 2093981-2096134 - 717 110638186 pnp CHU_1786 - - polyribonucleotide nucleotidyltransferase 2096246-2096521 - 91 110638187 rpsO CHU_1787 - - 30S ribosomal protein S15 2105287-2105652 + 121 110638195 - CHU_1795 - - hypothetical protein 2120340-2121086 + 248 110638206 - CHU_1806 - - hypothetical protein 2143567-2143902 + 111 110638225 - CHU_1825 - - conserved hypothetical protein; possible protein-export membrane protein 2144911-2145189 + 92 110638227 groES CHU_1827 - - 10 kDa chaperonin 2145245-2146873 + 542 110638228 groEL CHU_1828 - - 60 kDa chaperonin 2170821-2171078 + 85 110638251 rpsT CHU_1851 - - 30S ribosomal protein S20 2198716-2199237 - 173 110638278 - CHU_1879 - - hypothetical protein 2238575-2238772 - 65 110638306 - CHU_1907 - - hypothetical protein 2245564-2245947 + 127 110638312 spoIIA CHU_1913 - - anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 2252407-2253048 + 213 110638319 - CHU_1920 - - hypothetical protein 2260329-2260937 + 202 110638329 - CHU_1930 - - hypothetical protein 2278343-2280163 - 606 110638350 rpsA CHU_1951 - - 30S ribosomal protein S1 2329638-2330450 + 270 110638392 - CHU_1993 - - hypothetical protein 2346156-2346530 - 124 110638410 - CHU_2011 - - hypothetical protein 2351429-2352256 - 275 110638417 exbB CHU_2018 - - biopolymer transport protein 2416249-2416836 - 195 110638462 - CHU_2066 - - hypothetical protein 2417105-2417635 - 176 110638464 - CHU_2068 - - hypothetical protein 2452005-2452277 - 90 110638502 - CHU_2106 - - hypothetical protein 2462967-2463251 - 94 110638512 acpP CHU_2116 - - acyl carrier protein 2558779-2559126 - 115 110638597 - CHU_2201 - - hypothetical protein 2559155-2559910 - 251 110638598 cox3 CHU_2202 - - cytochrome c oxidase, subunit III 2562575-2564404 - 609 110638602 coxN CHU_2206 - - cytochrome c oxidase, subunit I 2564461-2565504 - 347 110638603 ctaC CHU_2207 - - heme/copper-type cytochrome/quinol oxidase, subunit 2 2565619-2567031 - 470 110638604 - CHU_2208 - - hypothetical protein 2567055-2567657 - 200 110638605 - CHU_2209 - - hypothetical protein 2568233-2569588 - 451 110638607 nfrD CHU_2211 - - probable molybdopterin oxidoreductase 2569609-2572680 - 1023 110638608 nrfC CHU_2212 - - molybdopterin oxidoreductase, iron-sulfur binding subunit 2583969-2586236 - 755 110638619 acnA CHU_2223 - - aconitate hydratase 2595796-2596143 + 115 110638624 - CHU_2228 - - ferredoxin 2 with 4Fe-4S binding domain 2596259-2597446 + 395 110638625 pgk CHU_2229 - - phosphoglycerate kinase 2609098-2610309 + 403 110638636 sucC CHU_2240 - - succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta subunit) 2644711-2647173 - 820 110638668 bglX CHU_2273 - - candidate b-glucosidase, Glycoside Hydrolase Family 3 protein 2665336-2665896 + 186 110638690 - CHU_2296 - - general stress protein 2712329-2712640 + 103 110638742 - CHU_2351 - - hypothetical protein 2764196-2765077 - 293 110638791 sucD CHU_2402 - - succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) 2806972-2807277 - 101 110638831 yajC CHU_2443 - - preprotein translocase subunit YajC 2842709-2844622 + 637 110638860 sdhA CHU_2473 - - succinate dehydrogenase, flavoprotein subunit (fumarate reductase, flavoprotein subunit) 2847642-2847977 + 111 110638864 - CHU_2477 - - hypothetical protein 2961591-2962259 - 222 110638972 ung CHU_2586 - - uracil-DNA-glycosylase 2964772-2965701 + 309 110638976 - CHU_2590 - - possible chromosome segregation ATPase 2966530-2966973 + 147 110638979 rplI CHU_2593 - - 50S ribosomal subunit protein L9 3007360-3007938 - 192 110639011 rplY CHU_2626 - - 50S ribosomal subunit protein L25 3062206-3063999 + 597 110639064 - CHU_2679 - - probable outer membrane lipoprotein P61 3064152-3065132 + 326 110639065 adhB CHU_2680 - - pyruvate dehydrogenase E1 component 3069823-3070293 + 156 110639070 - CHU_2685 - - hypothetical protein 3071992-3073800 - 602 110639073 typA CHU_2688 - - GTP-binding elongation factor 3095661-3096653 - 330 110639092 - CHU_2708 - - hypothetical protein 3104037-3104405 + 122 110639100 - CHU_2717 - - tonB-related protein 3104445-3105053 + 202 110639101 - CHU_2718 - - hypothetical protein 3107645-3108274 + 209 110639107 ahpC CHU_2724 - - alkyl hydroperoxide reductase, subunit C 3135208-3135480 + 90 110639133 hupB CHU_2750 - - DNA-binding protein HU-beta 3146586-3147230 - 214 110639145 - CHU_2762 - - conserved hypothetical protein; possible methyltransferase 3180243-3180566 - 107 110639172 - CHU_2790 - - hypothetical protein 3180799-3181122 - 107 110639173 - CHU_2791 - - hypothetical protein 3217008-3217334 + 108 110639201 - CHU_2820 - - hypothetical protein 3279408-3280295 - 295 110639249 - CHU_2868 - - hypothetical protein 3329123-3329569 + 148 110639286 - CHU_2911 - - hypothetical protein 3398187-3398423 - 78 110639343 - CHU_2968 - - hypothetical protein 3423220-3424227 + 335 110639361 gapA CHU_2987 - - glyceraldehyde-3-phosphate dehydrogenase A 3463620-3464558 + 312 110639394 mdh CHU_3020 - - malate dehydrogenase 3479921-3480757 - 278 110639410 tsf CHU_3036 - - elongation factor Ts (EF-Ts) 3480854-3481618 - 254 110639411 rpsB CHU_3037 - - 30S ribosomal subunit protein S2 3481643-3482029 - 128 110639412 rpsI CHU_3038 - - 30S ribosomal subunit protein S9 3482041-3482484 - 147 110639413 rplM CHU_3039 - - 50S ribosomal subunit protein L13 3499299-3500396 - 365 110639434 fbaA CHU_3060 - - fructose-bisphosphate aldolase, class II 3509757-3509951 - 64 110639445 - CHU_3072 - - hypothetical protein 3537971-3539869 + 632 110639474 dnaK CHU_3101 - - chaperone protein (heat shock protein 70) 3549818-3550348 + 176 110639481 ppa CHU_3108 - - inorganic pyrophosphatase 3562829-3565825 - 998 110639492 - CHU_3119 - - CHU large protein; possible phytase 3581603-3582886 - 427 110639506 eno CHU_3133 - - phosphopyruvate hydratase (enolase) 3584113-3584583 - 156 110639508 rplQ CHU_3135 - - 50S ribosomal subunit protein L17 3586689-3587066 - 125 110639512 rpsM CHU_3139 - - 30S ribosomal protein S13 3589564-3590016 - 150 110639516 rplO CHU_3143 - - 50S ribosomal protein L15 3590022-3590198 - 58 110639517 rpmD CHU_3144 - - 50S ribosomal protein L30 3590211-3590729 - 172 110639518 rpsE CHU_3145 - - 30S ribosomal protein S5 3590750-3591100 - 116 110639519 rplR CHU_3146 - - 50S ribosomal protein L18 3591108-3591662 - 184 110639520 rplF CHU_3147 - - 50S ribosomal protein L6 3592180-3592449 - 89 110639522 rpsN CHU_3149 - - 30S ribosomal protein S14 3592459-3593013 - 184 110639523 rplE CHU_3150 - - 50S ribosomal protein L5 3594213-3594635 - 140 110639528 rplP CHU_3155 - - 50S ribosomal protein L16 3594669-3595433 - 254 110639529 rpsC CHU_3156 - - 30S ribosomal protein S3 3595439-3595987 - 182 110639530 rplV CHU_3157 - - 50S ribosomal protein L22 3596286-3597125 - 279 110639532 rplB CHU_3159 - - 50S ribosomal protein L2 3598067-3598687 - 206 110639535 rplC CHU_3162 - - 50S ribosomal protein L3 3599191-3601296 - 701 110639537 fusA CHU_3164 - - translation elongation factor G (EF-G) 3601315-3601782 - 155 110639538 rpsG CHU_3165 - - 30S ribosomal protein S7 3602773-3607089 - 1438 110639541 rpoC CHU_3168 - - DNA-directed RNA polymerase, beta prime subunit 3607140-3611015 - 1291 110639542 rpoB CHU_3169 - - DNA-directed RNA polymerase, beta subunit 3611151-3611522 - 123 110639543 rplL CHU_3170 - - 50S ribosomal protein L7/L12 3611588-3612091 - 167 110639544 rplJ CHU_3171 - - 50S ribosomal protein L10 3614241-3615428 - 395 110639548 tufB CHU_3175 - - translation elongation factor EF-Tu 3642297-3642458 - 53 110639578 - CHU_3205 - - hypothetical protein 3651106-3651786 - 226 110639581 - CHU_3208 - - hypothetical protein 3735482-3737575 - 697 110639640 - CHU_3268 - - peptidyl-prolyl cis-trans isomerase 3748584-3749339 - 251 110639649 tpiA CHU_3277 - - triosephosphate isomerase 3752665-3752916 + 83 110639652 - CHU_3280 - - hypothetical protein 3760082-3760348 - 88 110639659 - CHU_3287 - - hypothetical protein 3780892-3781920 - 342 110639680 mreB CHU_3308 - - rod shape-determining protein 3786660-3787988 - 442 110639686 amtB CHU_3314 - - ammonium transporter 3797235-3797447 + 70 110639698 - CHU_3327 - - hypothetical protein 3865373-3866323 + 316 110639753 - CHU_3384 - - hypothetical protein 3877023-3877241 + 72 110639764 - CHU_3395 - - hypothetical protein 3878485-3878682 + 65 110639766 rpsU CHU_3397 - - 30S ribosomal protein S21 3880004-3881263 - 419 110639769 metK CHU_3400 - - methionine adenosyltransferase (AdoMet synthetase) 3892779-3893429 + 216 110639783 ompH CHU_3414 - - outer membrane protein, ompH family 3912896-3913405 + 169 110639799 slyD CHU_3430 - - peptidylprolyl isomerase (FKBP-type peptidyl-prolyl cis-trans isomerase) 3958984-3959142 + 52 110639811 - CHU_3444 - - hypothetical protein 4004106-4005023 - 305 110639826 - CHU_3459 - - hypothetical protein 4010941-4011576 + 211 110639833 grx CHU_3466 - - peroxiredoxin 4017025-4017327 + 100 110639838 - CHU_3471 - - hypothetical protein 4043045-4044235 + 396 110639860 gldJ CHU_3494 - - possible gliding motility-related protein; possible serine kinase 4046418-4048178 + 586 110639864 oppA CHU_3498 - - oligopeptide ABC transporter, solute-binding protein 4099234-4099440 + 68 110639909 - CHU_3543 - - hypothetical protein 4104443-4105057 + 204 110639916 - CHU_3550 - - outer membrane protein 4105346-4105630 + 94 110639918 - CHU_3552 - - hypothetical protein 4187525-4188820 - 431 110639999 glyA CHU_3633 - - glycine hydroxymethyltransferase 4207087-4207974 + 295 110640016 - CHU_3650 - - FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 4259190-4259522 + 110 110640053 - CHU_3687 - - DNA-binding protein HU 4276374-4276952 - 192 110640070 lemA CHU_3704 - - LemA protein 4293049-4294092 + 347 110640084 acoA CHU_3718 - - pyruvate dehydrogenase E1 component alpha subunit 4307737-4308219 - 160 110640094 - CHU_3728 - - hypothetical protein 4312077-4313291 + 404 110640098 - CHU_3732 - - conserved hypothetical protein; possible outer membrane protein 4324692-4326092 + 466 110640108 leuC CHU_3742 - - 3-isopropylmalate dehydratase, large subunit 4326917-4327999 + 360 110640110 leuB CHU_3744 - - 3-isopropylmalate dehydrogenase 4393560-4393853 + 97 110640169 - CHU_3804 - - hypothetical protein