Photorhabdus luminescens subsp. laumondii TTO1, complete genome - 1..5688987 Location Strand Length PID Gene Synonym Code COG Product 14995-15510 - 171 37524046 - plu0014 - - hypothetical protein 23936-24139 - 67 37524058 - plu0026 - - hypothetical protein 34860-36242 - 460 37524072 atpD plu0040 - COG0055C ATP synthase subunit B 37199-38740 - 513 37524074 atpA plu0042 - COG0056C ATP synthase subunit A 38755-39288 - 177 37524075 atpH plu0043 - COG0712C ATP synthase subunit D 73631-74257 + 208 37524101 sodA plu0075 - COG0605P superoxide dismutase [Mn] 78376-78669 - 97 37524108 - plu0082 - COG5572S hypothetical protein 96415-98034 + 539 37524126 pckA plu0100 - COG1866C phosphoenolpyruvate carboxykinase 101566-102060 + 164 37524130 - plu0104 - COG3193R hypothetical protein 126961-127392 + 143 37524147 uspA plu0121 - COG0589T universal stress protein A 129785-131827 - 680 37524150 opdA plu0124 - COG0339E oligopeptidase A 189834-190466 + 210 37524200 eda plu0178 - COG0800G KHG/KDPG aldolase [Includes: 4-hydroxy-2-oxoglutarate ldolase (2-keto-4-hydroxyglutarate aldolase) (KHG-aldolase); 2-dehydro-3-deoxyphosphogluconate aldolase (Phospho-2-dehydro-3-deoxygluconate aldolase) (Phospho-2-keto-3-deoxygluconate aldolase) (2-keto-3-deoxy-6-phosphogluconate aldolase) (KDPG-aldolase)] 205415-205750 - 111 37524218 glpE plu0197 - COG0607P Thiosulfate sulfurtransferase GlpE 221324-222364 + 346 37524234 pstS plu0214 - COG0226P Phosphate-binding periplasmic protein precursor PstS 250149-251558 - 469 37524256 glnA plu0237 - - glutamine synthetase 252018-253838 + 606 37524257 typA plu0238 - COG1217T GTPase 290628-290903 - 91 37524292 rpoZ plu0273 - COG1758K DNA-directed RNA polymerase omega subunit 310052-310966 + 304 37524311 glyQ plu0293 - - glycyl-tRNA synthetase alpha subunit 310976-313045 + 689 37524312 glyS plu0294 - COG0751J glycyl-tRNA synthetase beta subunit 401704-402222 + 172 37524384 - plu0373 - - hypothetical protein 423451-424020 + 189 37524400 ppiA plu0391 - COG0652O Peptidyl-prolyl cis-trans isomerase A precursor (PPIase A) (Rotamase A) (Cyclophilin A) 451818-452390 + 190 37524431 slyD plu0422 - COG1047O peptidyl-prolyl cis-trans isomerase, FkbP-type (rotamase) 455954-456328 + 124 37524438 rpsL plu0429 - - 30S ribosomal protein S12 456426-456896 + 156 37524439 rpsG plu0430 - COG0049J 30S ribosomal protein S7 456977-459085 + 702 37524440 fusA plu0431 - COG0480J translation elongation factor EF-G 459158-460342 + 394 37524441 tuf plu0432 - COG0050J elongation factor Tu 461002-461547 + 181 37524443 nusG plu0434 - COG0250K transcription antitermination protein NusG 461709-462137 + 142 37524444 rplK plu0435 - - 50S ribosomal protein L11 462141-462842 + 233 37524445 rplA plu0436 - - 50S ribosomal protein L1 463159-463665 + 168 37524446 rplJ plu0437 - COG0244J 50S ribosomal protein L10 463729-464100 + 123 37524447 rplL plu0438 - COG0222J 50S ribosomal protein L7/L12 (L8) 464440-468468 + 1342 37524448 rpoB plu0439 - COG0085K DNA-directed RNA polymerase beta subunit 468599-472819 + 1406 37524449 rpoC plu0440 - COG0086K DNA-directed RNA polymerase beta' subunit 531625-531897 + 90 37524501 dbhA plu0492 - - NA-binding protein HU-alpha (NS2) (HU-2) 557154-557735 - 193 37524516 - plu0507 - COG3539NU hypothetical protein 576070-576849 + 259 37524528 deoC plu0520 - COG0274F deoxyribose-phosphate aldolase 578355-579071 + 238 37524530 deoD plu0522 - COG0813F purine nucleoside phosphorylase 643996-644949 + 317 37524574 talB plu0568 - - transaldolase 655919-657829 + 636 37524583 dnaK plu0579 - COG0443O molecular chaperone DnaK 670379-670642 - 87 37524593 rpsT plu0589 - COG0268J 30S ribosomal protein S20 772356-773081 + 241 37524673 rpsB plu0672 - - 30S ribosomal protein S2 773232-774083 + 283 37524674 tsf plu0673 - - elongation factor Ts 775085-775642 + 185 37524676 frr plu0675 - - ribosome releasing factor 782865-783362 + 165 37524682 hlpA plu0681 - COG2825M Histone-like protein HLP-1 precursor 785013-785801 + 262 37524685 lpxA plu0684 - COG1043M UDP-N-acetylglucosamine acyltransferase 791130-792089 + 319 37524689 accA plu0688 - COG0825I acetyl-CoA carboxylase alpha subunit 798252-799067 - 271 37524696 metQ plu0695 - COG1464P D-methionine-binding periplasmic protein precursor MetQ 974708-975577 - 289 37524842 speE plu0843 - COG0421E spermidine synthase 989805-990350 + 181 37524855 - plu0860 - COG0634F hypoxanthine-guanine phosphoribosyltransferase 992368-992919 + 183 37524859 - plu0864 - COG0634F hypoxanthine-guanine phosphoribosyltransferase 1039354-1039701 + 115 37524896 - plu0904 - COG0316S hypothetical protein 1051943-1053244 + 433 37524905 eno plu0913 - COG0148G phosphopyruvate hydratase 1088144-1090138 + 664 37524938 tktA plu0946 - COG0021G transketolase 1097308-1098384 + 358 37524947 fba plu0957 - COG0191G fructose-bisphosphate aldolase 1353190-1353462 - 90 37525136 - plu1168 - - hypothetical protein 1355622-1355948 + 108 37525139 - plu1171 - - hypothetical protein 1381163-1382401 + 412 37525165 nqrB plu1197 - COG1805C Na(+)-translocating NADH-quinone reductase subunit B 1444202-1445269 + 355 37525216 recA plu1249 - COG0468L recombinase A 1456067-1456315 + 82 37525224 rpsP plu1257 - - 30S ribosomal protein S16 1457739-1458092 + 117 37525227 rplS plu1260 - - 50S ribosomal protein L19 1499176-1499388 + 70 37525256 cspE plu1289 - - cold shock protein E 1510833-1513415 - 860 37525270 leuS plu1303 - COG0495J leucyl-tRNA synthetase 1531273-1532940 + 555 37525285 glnS plu1319 - COG0008J glutaminyl-tRNA synthetase 1651658-1652083 + 141 37525328 ndk plu1372 - - nucleoside diphosphate kinase 1682226-1683644 - 472 37525357 gltX plu1401 - COG0008J glutamyl-tRNA synthetase 1712183-1713466 - 427 37525379 gltA plu1425 - COG0372C citrate synthase 1715067-1716833 + 588 37525382 sdhA plu1428 - COG1053C succinate dehydrogenase catalytic subunit 1722062-1723228 + 388 37525386 sucC plu1432 - COG0045C succinyl-CoA synthetase subunit beta 1723231-1724106 + 291 37525387 sucD plu1433 - COG0074C succinyl-CoA synthetase alpha subunit 1741045-1742613 + 522 37525401 cydA plu1449 - COG1271C Cytochrome D ubiquinol oxidase subunit I (Cytochrome BD-I oxidase subunit I) 1748514-1749014 + 166 37525408 pal plu1456 - COG2885M peptidoglycan-associated lipoprotein precursor 1764791-1765543 - 250 37525423 gpmA plu1471 - COG0588G phosphoglyceromutase 1855422-1857449 - 675 37525501 metG plu1554 - COG0073R,COG0143J methionyl-tRNA synthetase 1864556-1865962 + 468 37525507 gnd plu1560 - COG0362G 6-phosphogluconate dehydrogenase 1882485-1882823 - 112 37525522 - plu1575 - - hypothetical protein 1889263-1889523 - 86 37525528 grxA plu1581 - COG0695O glutaredoxin 1 (Grx1) 1913131-1913742 + 203 37525549 lolA plu1602 - COG2834M outer-membrane lipoprotein carrier protein precursor 1915325-1916614 + 429 37525551 serS plu1604 - COG0172J seryl-tRNA synthetase 1926634-1928916 - 760 37525558 pflB plu1613 - COG1882C formate acetyltransferase I (pyruvate formate-lyase 1) 1938005-1939678 + 557 37525567 rpsA plu1622 - COG0539J 30S ribosomal protein S1 2086689-2087879 - 396 37525685 aspC plu1750 - COG1448E aspartate aminotransferase 2088101-2089267 - 388 37525686 ompN plu1751 - COG3203M Outer membrane protein N precursor (Porin OmpN) 2117794-2118900 - 368 37525710 ompA plu1775 - COG2885M Outer membrane protein A precursor (Outer membrane protein II*) 2190134-2190346 + 70 37525773 - plu1842 - - hypothetical protein 2319961-2321028 + 355 37525877 fliC plu1954 - COG1344N flagellin 2490539-2492311 + 590 37526023 aspS plu2107 - COG0173J aspartyl-tRNA synthetase 2492778-2493521 + 247 37526025 - plu2109 - - hypothetical protein 2551258-2552211 - 317 37526082 - plu2166 - - hypothetical protein 2566720-2566944 + 74 37526097 - plu2181 - COG1942R 4-oxalocrotonate tautomerase 2678805-2679005 - 66 37526196 - plu2283 - - hypothetical protein 2700912-2701406 - 164 37526212 - plu2299 - - hypothetical protein 2918691-2919332 - 213 37526370 ompW plu2478 - COG3047M Outer membrane protein W precursor 2921745-2922290 - 181 37526373 - plu2481 - COG3637M hypothetical protein 3001821-3002816 + 331 37526450 gapA plu2558 - COG0057G glyceraldehyde-3-phosphate dehydrogenase 3034569-3035357 + 262 37526483 fabI plu2592 - COG0623I enoyl-(acyl carrier protein) reductase 3038923-3040197 - 424 37526487 tyrS plu2596 - COG0162J tyrosyl-tRNA synthetase 3045733-3046083 - 116 37526495 - plu2604 - COG0278O hypothetical protein 3056560-3057969 + 469 37526504 pykF plu2613 - - pyruvate kinase 3059515-3059751 + 78 37526506 lpp plu2615 - - major outer membrane lipoprotein precursor (murein-lipoprotein) 3119774-3120757 - 327 37526556 pheS plu2665 - COG0016J phenylalanyl-tRNA synthetase alpha subunit 3121029-3121385 - 118 37526557 rplT plu2666 - - 50S ribosomal protein L20 3215568-3217034 - 488 37526603 guaB plu2713 - COG0516F,COG0517R inositol-5-monophosphate dehydrogenase 3304253-3304462 - 69 37526673 cspC plu2783 - - cold shock protein 3308814-3309308 - 164 37526678 - plu2788 - COG5472S hypothetical protein 3326562-3327815 - 417 37526691 icd plu2801 - COG0538C isocitrate dehydrogenase 3361556-3362806 - 416 37526721 fabF plu2831 - COG0304IQ 3-oxoacyl-(acyl carrier protein) synthase 3362880-3363116 - 78 37526722 acpP plu2832 - COG0236IQ acyl carrier protein (cytosolic activating factor) (CAF) 3366996-3367166 - 56 37526727 rpmF plu2837 - COG0333J 50S ribosomal protein L32 3383046-3385025 - 659 37526740 - plu2850 - COG4771P hypothetical protein 3394549-3394968 + 139 37526749 - plu2859 - COG1051F hypothetical protein 3405583-3405867 + 94 37526759 rplY plu2869 - COG1825J 50S ribosomal protein L25 3514650-3515003 + 117 37526902 - plu3014 - - hypothetical protein 3558877-3560007 + 376 37526941 nrdB plu3053 - COG0208F ribonucleotide-diphosphate reductase beta subunit 3579838-3580695 - 285 37526959 menB plu3071 - COG0447H naphthoate synthase 3593863-3594405 - 180 37526970 nuoI plu3082 - COG1143C NADH dehydrogenase subunit I 3595394-3598129 - 911 37526972 nuoG plu3084 - COG1034C NADH dehydrogenase gamma subunit 3611182-3612384 + 400 37526983 ackA plu3095 - COG0282C acetate/propionate kinase 3612456-3614597 + 713 37526984 pta plu3096 - COG0280C,COG0857R phosphate acetyltransferase 3768513-3769856 + 447 37527087 fadL plu3202 - COG2067I Long-chain fatty acid transport protein precursor (outer membrane FadL protein) 3788970-3789986 - 338 37527096 - plu3213 - COG0388R hypothetical protein 3893813-3894013 - 66 37527157 - plu3277 - - hypothetical protein 3894032-3894367 - 111 37527158 fdx plu3278 - COG0633C Ferredoxin, 2Fe-2S 3896232-3896753 - 173 37527160 hscB plu3280 - COG1076O co-chaperone HscB 3897224-3897610 - 128 37527162 nifU plu3282 - COG0822C NifU protein 3900339-3901142 + 267 37527166 suhB plu3286 - COG0483G Inositol-1-monophosphatase (IMPase) (Inositol-1-phosphatase) (I-1-Pase) 3907061-3908314 - 417 37527171 glyA plu3291 - COG0112E serine hydroxymethyltransferase 4040649-4041254 - 201 37527300 - plu3426 - COG4540R hypothetical protein 4067535-4067726 + 63 37527333 - plu3459 - - hypothetical protein 4068248-4068616 + 122 37527335 - plu3461 - COG5566S hypothetical protein 4181518-4183032 - 504 37527421 lysS plu3548 - COG1190J lysyl-tRNA synthetase 4183042-4183974 - 310 37527422 prfB plu3549 - COG1186J Peptide chain release factor 2 (RF-2) 4246377-4246769 - 130 37527465 gcvH plu3597 - COG0509E glycine cleavage system protein H 4254226-4255467 - 413 37527473 serA plu3605 - COG0111HE D-3-phosphoglycerate dehydrogenase (PGDH) 4256691-4256852 - 53 37527475 - plu3607 - - hypothetical protein 4263637-4264509 - 290 37527483 - plu3615 - COG0668M hypothetical protein 4266608-4269205 - 865 37527487 acnB plu3619 - COG1049C aconitate hydratase 4269678-4271108 - 476 37527489 lpdA plu3621 - COG1249C dihydrolipoamide dehydrogenase 4271312-4272910 - 532 37527490 aceF plu3622 - COG0508C dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (E2) 4272925-4275588 - 887 37527491 aceE plu3623 - COG2609C pyruvate dehydrogenase E1 component 4291546-4294257 - 903 37527509 secA plu3645 - COG0653U translocase 4295553-4296485 - 310 37527512 lpxC plu3648 - - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 4296569-4297729 - 386 37527513 ftsZ plu3649 - COG0206D cell division protein FtsZ 4329692-4330297 + 201 37527540 leuD plu3676 - COG0066E isopropylmalate isomerase small subunit 4338372-4339544 + 390 37527547 metK plu3683 - COG0192H S-adenosylmethionine synthetase 4452723-4452938 - 71 37527652 cspI plu3790 - - cold shock-like protein (CPS-I) 4472489-4472983 + 164 37527667 ppiB plu3805 - COG0652O Peptidyl-prolyl cis-trans isomerase B (PPIase B) (rotamase B) 4489199-4490119 + 306 37527681 - plu3821 - COG0330O hypothetical protein 4496126-4497784 - 552 37527688 ushA plu3828 - COG0737F Protein UshA precursor [Includes: UDP-sugar hydrolase (UDP-sugar diphosphatase) (UDP-sugar pyrophosphatase); 5'-nucleotidase (5'-NT)] 4507364-4508008 - 214 37527696 adk plu3836 - COG0563F adenylate kinase 4508191-4510083 - 630 37527697 htpG plu3837 - COG0326O heat shock protein 90 4513682-4514011 - 109 37527700 - plu3840 - COG0718S hypothetical protein 4540897-4541172 - 91 37527726 hupB plu3866 - - DNA-binding protein HU-beta, NS1 (HU-1) 4546269-4547573 - 434 37527730 tig plu3870 - COG0544O trigger factor 4552922-4554913 + 663 37527736 cyoB plu3876 - COG0843C ubiquinol oxidase polypeptide I (cytochrome O subunit 1) (oxidase BO(3) subunit 1) (cytochrome O ubiquinol oxidase subunit 1) (ubiquinol oxidase chain A) 4570286-4570756 - 156 37527754 ribH plu3898 - - riboflavin synthase subunit beta 4575416-4575745 - 109 37527759 yajC plu3903 - COG1862U preprotein translocase subunit YajC 4579165-4579767 + 200 37527763 ahpC plu3907 - COG0450O alkyl hydroperoxide reductase, small subunit (antioxidant) 4605757-4607712 - 651 37527782 cpdB plu3927 - COG0737F 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic precursor protein 4644161-4645321 + 386 37527812 - plu3957 - - hypothetical protein 4650119-4650781 - 220 37527820 - plu3965 - COG4380S hypothetical protein 4651159-4651830 - 223 37527822 - plu3967 - COG1462M hypothetical protein 4663462-4663677 + 71 37527832 rpsU plu3977 - COG0828J 30S ribosomal protein S21 4665714-4667558 + 614 37527834 rpoD plu3979 - COG0568K RNA polymerase sigma factor 4704344-4704736 - 130 37527869 rpsI plu4014 - - 30S ribosomal protein S9 4704752-4705180 - 142 37527870 rplM plu4015 - - 50S ribosomal protein L13 4706909-4707313 + 134 37527872 - plu4017 - - hypothetical protein 4759808-4761157 + 449 37527922 accC plu4075 - COG0439I acetyl-CoA carboxylase 4776705-4777001 + 98 37527936 fis plu4089 - COG2901KL DNA-binding protein Fis 4818449-4819015 - 188 37527975 efp plu4130 - COG0231J elongation factor P 4822824-4824470 - 548 37527979 groEL plu4134 - COG0459O chaperonin GroEL 4824520-4824813 - 97 37527980 groES plu4135 - COG0234O co-chaperonin GroES 4825877-4827301 + 474 37527982 aspA plu4137 - COG1027E Aspartate ammonia-lyase (Aspartase) 5003890-5004195 - 101 37528110 - plu4279 - - hypothetical protein 5041963-5042175 - 70 37528147 - plu4316 - COG2501S hypothetical protein 5080307-5080843 - 178 37528177 ssb plu4349 - COG0629L single-strand DNA-binding protein 5134218-5135525 - 435 37528223 aceA plu4395 - COG2224C isocitrate lyase 5147771-5149105 - 444 37528229 pepQ plu4401 - COG0006E Xaa-Pro dipeptidase (X-Pro dipeptidase) (proline dipeptidase) (prolidase) (imidodipeptidase) 5235451-5238348 + 965 37528304 valS plu4483 - COG0525J valyl-tRNA synthetase 5255551-5255937 + 128 37528319 - plu4498 - COG0251J hypothetical protein 5259368-5259619 - 83 37528323 - plu4502 - - hypothetical protein 5281393-5283327 - 644 37528342 deaD plu4523 - COG0513LKJ inducible ATP-independent RNA helicase 5284616-5286745 - 709 37528344 pnp plu4525 - COG1185J polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) (PNPase) (CAP87K) 5286991-5287260 - 89 37528345 rpsO plu4526 - - 30S ribosomal protein S15 5288806-5291535 - 909 37528348 infB plu4529 - COG0532J translation initiation factor IF-2 5294549-5295886 - 445 37528352 mrsA plu4533 - COG1109G Phosphoglucomutase protein MrsA 5296811-5298772 - 653 37528354 ftsH plu4535 - COG0465O cell division protein 5300017-5300493 - 158 37528357 greA plu4538 - COG0782K transcription elongation factor GreA 5303698-5303955 - 85 37528360 rpmA plu4541 - - 50S ribosomal protein L27 5303975-5304283 - 102 37528361 rplU plu4542 - - 50S ribosomal protein L21 5312079-5312609 + 176 37528370 ppa plu4551 - COG0221C inorganic pyrophosphatase 5336224-5336676 - 150 37528389 rplI plu4570 - COG0359J 50S ribosomal protein L9 5336715-5336942 - 75 37528390 rpsR plu4571 - - 30S ribosomal protein S18 5337270-5337665 - 131 37528392 rpsF plu4573 - COG0360J 30S ribosomal protein S6 5341933-5343231 - 432 37528396 purA plu4577 - - adenylosuccinate synthetase 5343379-5344389 - 336 37528397 hflC plu4578 - COG0330O Lambda CII stability-governing protein HflC 5381423-5382223 - 266 37528435 - plu4618 - COG0561R hypothetical protein 5417538-5417711 - 57 37528465 - plu4648 - COG2314S hypothetical protein 5437845-5438171 - 108 37528481 trxA plu4664 - COG0526OC thioredoxin 1 (TRX1) (TRX) 5443372-5444850 - 492 37528485 ilvC plu4668 - COG0059EH ketol-acid reductoisomerase 5486963-5487352 - 129 37528521 rpsK plu4704 - COG0100J 30S ribosomal protein S11 5489362-5489796 - 144 37528524 rplO plu4707 - COG0200J 50S ribosomal protein L15 5489800-5489979 - 59 37528525 rpmD plu4708 - COG1841J 50S ribosomal protein L30 5489985-5490485 - 166 37528526 rpsE plu4709 - COG0098J 30S ribosomal protein S5 5490500-5490853 - 117 37528527 rplR plu4710 - COG0256J 50S ribosomal protein L18 5490863-5491396 - 177 37528528 rplF plu4711 - COG0097J 50S ribosomal protein L6 5492155-5492694 - 179 37528531 rplE plu4714 - COG0094J 50S ribosomal protein L5 5492709-5493023 - 104 37528532 rplX plu4715 - COG0198J 50S ribosomal protein L24 5493585-5493839 - 84 37528534 rpsQ plu4717 - COG0186J 30S ribosomal protein S17 5493839-5494030 - 63 37528535 rpmC plu4718 - - 50S ribosomal protein L29 5494030-5494440 - 136 37528536 rplP plu4719 - COG0197J 50S ribosomal protein L16 5494453-5495154 - 233 37528537 rpsC plu4720 - COG0092J 30S ribosomal protein S3 5495812-5496636 - 274 37528540 rplB plu4723 - COG0090J 50S ribosomal protein L2 5496656-5496958 - 100 37528541 rplW plu4724 - COG0089J 50S ribosomal protein L23 5496955-5497560 - 201 37528542 rplD plu4725 - - 50S ribosomal protein L4 5497577-5498206 - 209 37528543 rplC plu4726 - - 50S ribosomal protein L3 5498239-5498550 - 103 37528544 rpsJ plu4727 - COG0051J 30S ribosomal protein S10 5500355-5501539 - 394 37528547 tuf plu4730 - COG0050J elongation factor Tu 5539633-5539848 - 71 37528573 rpmE plu4758 - COG0254J 50S ribosomal protein L31 5548238-5548480 - 80 37528581 - plu4766 - COG3074S hypothetical protein 5612392-5612868 - 158 37528648 secB plu4839 - COG1952U export protein SecB 5612938-5613375 - 145 37528649 - plu4840 - COG0607P hypothetical protein 5618734-5619759 - 341 37528654 tdh plu4845 - COG1063ER L-threonine 3-dehydrogenase 5619769-5620965 - 398 37528655 kbl plu4846 - COG0156H 2-amino-3-ketobutyrate coenzyme A ligase 5638584-5638751 - 55 37528672 rpmG plu4863 - COG0267J 50S ribosomal protein L33