Pseudomonas putida KT2440, complete genome - 1..6181863 Location Strand Length PID Gene Synonym Code COG Product 6471-8153 - 560 26986751 yidC PP_0006 - COG0706U putative inner membrane protein translocase component YidC 13330-15750 + 806 26986758 gyrB PP_0013 - COG0187L DNA gyrase subunit B 263249-264691 + 480 26986956 gabD PP_0213 - COG1012C succinate-semialdehyde dehydrogenase 264874-266151 + 425 26986957 gabT PP_0214 - COG0160E 4-aminobutyrate aminotransferase 406363-408003 - 546 26987080 aceF PP_0338 - COG0508C dihydrolipoamide acetyltransferase 408017-410662 - 881 26987081 aceE PP_0339 - COG2609C pyruvate dehydrogenase, E1 component 471083-472933 - 616 26987129 rpoD PP_0387 - COG0568K RNA polymerase sigma factor 532734-533927 + 397 26987181 tuf PP_0440 - COG0050J elongation factor Tu 535133-535564 + 143 26987184 rplK PP_0443 - - 50S ribosomal protein L11 535564-536259 + 231 26987185 rplA PP_0444 - - 50S ribosomal protein L1 537035-537400 + 121 26987187 rplL PP_0446 - COG0222J 50S ribosomal protein L7/L12 537621-541694 + 1357 26987188 rpoB PP_0447 - COG0085K DNA-directed RNA polymerase beta subunit 541759-545958 + 1399 26987189 rpoC PP_0448 - COG0086K DNA-directed RNA polymerase beta' subunit 546170-546541 + 123 26987190 rpsL PP_0449 - - 30S ribosomal protein S12 547149-549296 + 715 26987192 fusA PP_0451 - COG0480J elongation factor G 549324-550517 + 397 26987193 tuf PP_0452 - COG0050J elongation factor Tu 551018-551686 + 222 26987195 rplC PP_0454 - - 50S ribosomal protein L3 551699-552301 + 200 26987196 rplD PP_0455 - - 50S ribosomal protein L4 552612-553436 + 274 26987198 rplB PP_0457 - COG0090J 50S ribosomal protein L2 555392-555658 + 88 26987204 rpsQ PP_0463 - COG0186J 30S ribosomal protein S17 556062-556376 + 104 26987206 rplX PP_0465 - COG0198J 50S ribosomal protein L24 557869-558402 + 177 26987210 rplF PP_0469 - COG0097J 50S ribosomal protein L6 558767-559267 + 166 26987212 rpsE PP_0471 - COG0098J 30S ribosomal protein S5 561493-561849 + 118 26987217 rpsM PP_0476 - COG0099J 30S ribosomal protein S13 561868-562257 + 129 26987218 rpsK PP_0477 - COG0100J 30S ribosomal protein S11 562273-562893 + 206 26987219 rpsD PP_0478 - COG0522J 30S ribosomal protein S4 563960-564346 + 128 26987221 rplQ PP_0480 - COG0203J 50S ribosomal protein L17 603694-604170 + 158 26987255 ribH PP_0517 - - riboflavin synthase subunit beta 648320-649675 - 451 26987296 accC-1 PP_0558 - COG0439I acetyl-CoA carboxylase 649693-650154 - 153 26987297 accB PP_0559 - COG0511I acetyl-CoA carboxylase 695578-697071 + 497 26987335 mmsA-1 PP_0597 - COG1012C methylmalonate-semialdehyde dehydrogenase 707068-707346 - 92 26987337 rpsT PP_0600 - COG0268J 30S ribosomal protein S20 798026-798643 + 205 26987420 fklB-1 PP_0684 - COG0545O peptidyl-prolyl cis-trans isomerase, FKBP-type 801514-802740 + 408 26987426 - PP_0690 - COG0536R GTP-binding protein, GTP1/Obg family 838042-838695 - 217 26987457 - PP_0721 - COG1825J 50S ribosomal protein L25 894045-894530 + 161 26987512 slyD PP_0776 - COG1047O peptidyl-prolyl cis-trans isomerase, FKBP-type 901610-902572 + 320 26987522 trxB PP_0786 - COG0492O thioredoxin reductase 975318-976136 - 272 26987574 suhB PP_0838 - COG0483G extragenic suppressor protein SuhB 983629-984054 + 141 26987585 ndk PP_0849 - - nucleoside diphosphate kinase 987012-988121 + 369 26987589 ispG PP_0853 - - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1175568-1177037 + 489 26987767 guaB PP_1031 - COG0516F,COG0517R inositol-5-monophosphate dehydrogenase 1243107-1243709 + 200 26987820 - PP_1084 - COG0450O antioxidant, AhpC/Tsa family 1246968-1248185 + 405 26987824 argG PP_1088 - COG0137E argininosuccinate synthase 1256919-1257128 - 69 26987835 - PP_1099 - - cold-shock domain family protein 1383313-1385028 - 571 26987940 proS PP_1205 - COG0442J prolyl-tRNA synthetase 1390192-1391967 + 591 26987948 aspS PP_1213 - COG0173J aspartyl-tRNA synthetase 1503194-1503622 + 142 26988050 rplM PP_1315 - - 50S ribosomal protein L13 1503637-1504029 + 130 26988051 rpsI PP_1316 - - 30S ribosomal protein S9 1528974-1530170 + 398 26988076 ftsZ PP_1342 - COG0206D cell division protein FtsZ 1549597-1551237 + 546 26988095 groEL PP_1361 - COG0459O chaperonin GroEL 1551363-1552817 - 484 26988096 pykA PP_1362 - - pyruvate kinase 1668553-1668882 + 109 26988195 rpsP PP_1462 - - 30S ribosomal protein S16 1670223-1670573 + 116 26988198 rplS PP_1465 - - 50S ribosomal protein L19 1712263-1712913 + 216 26988238 adk PP_1506 - COG0563F adenylate kinase 1736601-1737635 - 344 26988262 - PP_1530 - COG2171E 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putative 1785243-1785980 + 245 26988323 rpsB PP_1591 - - 30S ribosomal protein S2 1786166-1787029 + 287 26988324 tsf PP_1592 - - elongation factor Ts 1803644-1804591 + 315 26988339 accA PP_1607 - COG0825I acetyl-CoA carboxylase alpha subunit 1808946-1810235 + 429 26988344 eno PP_1612 - COG0148G phosphopyruvate hydratase 1827143-1828210 + 355 26988361 recA PP_1629 - COG0468L recombinase A 1860932-1861990 - 352 26988397 purM PP_1665 - COG0150F phosphoribosylaminoimidazole synthetase 1979328-1981058 + 576 26988503 rpsA PP_1772 - COG0539J 30S ribosomal protein S1 2014042-2015484 - 480 26988525 - PP_1794 - - hypothetical protein 2090672-2092351 + 559 26988598 - PP_1868 - COG0513LKJ ATP-dependent RNA helicase, DEAD box family 2147241-2150516 - 1091 26988635 rne PP_1905 - COG1530J ribonuclease E 2380334-2381368 + 344 26988814 oprF PP_2089 - COG2885M outer membrane protein OprF 2669705-2672314 - 869 26989063 acnB PP_2339 - COG1049C aconitate hydratase 2786987-2787550 + 187 26989162 ahpC PP_2439 - COG0450O alkyl hydroperoxide reductase, C subunit 2813861-2816242 + 793 26989193 pheT PP_2470 - COG0073R,COG0072J phenylalanyl-tRNA synthetase beta subunit 3300900-3301400 - 166 26989622 ppiB PP_2903 - COG0652O peptidyl-prolyl cis-trans isomerase B 3533320-3534018 + 232 26989841 - PP_3122 - COG1788I CoA-transferase, subunit A, putative 4522151-4524376 + 741 26990717 - PP_4012 - - isocitrate dehydrogenase, NADP-dependent, monomeric-type 4653520-4654845 + 441 26990810 aceA PP_4116 - COG2224C isocitrate lyase 4717435-4718655 + 406 26990867 fabB PP_4175 - COG0304IQ 3-oxoacyl-(acyl carrier protein) synthase 4727784-4728668 - 294 26990877 sucD PP_4185 - COG0074C succinyl-CoA synthetase alpha subunit 4728668-4729834 - 388 26990878 sucC PP_4186 - COG0045C succinyl-CoA synthetase subunit beta 4730006-4731442 - 478 26990879 lpdG PP_4187 - COG1249C dihydrolipoamide dehydrogenase 4731536-4732759 - 407 26990880 kgdB PP_4188 - COG0508C dihydrolipoamide acetyltransferase 4736596-4738368 - 590 26990883 sdhA PP_4191 - COG1053C succinate dehydrogenase 4746082-4747011 - 309 26990893 - PP_4201 - COG2025C electron transfer flavoprotein, alpha subunit 4886941-4888716 + 591 26990988 gcl PP_4297 - COG3960R glyoxylate carboligase 5080301-5081536 - 411 26991159 - PP_4473 - COG0527E aspartate kinase 5316081-5317097 - 338 26991362 ilvC PP_4678 - COG0059EH ketol-acid reductoisomerase 5352009-5354114 - 701 26991392 pnp PP_4708 - COG1185J polyribonucleotide nucleotidyltransferase 5354365-5354688 - 107 26991393 rpsO PP_4709 - - 30S ribosomal protein S15 5356218-5358758 - 846 26991395 infB PP_4712 - COG0532J translation initiation factor IF-2 5358786-5360267 - 493 26991396 nusA PP_4713 - COG0195K transcription elongation factor NusA 5368225-5368707 - 160 26991405 greA PP_4722 - COG0782K transcription elongation factor GreA 5368704-5371934 - 1076 26991406 carB PP_4723 - COG0458EF carbamoyl-phosphate synthase large subunit 5374311-5375438 - 375 26991409 dnaJ PP_4726 - COG0484O dnaJ protein 5375637-5377562 - 641 26991410 dnaK PP_4727 - COG0443O molecular chaperone DnaK 5525210-5525707 + 165 26991538 - PP_4858 - - hypothetical protein 5542809-5543255 - 148 26991554 rplI PP_4874 - COG0359J 50S ribosomal protein L9 5544432-5544857 - 141 26991557 rpsF PP_4877 - COG0360J 30S ribosomal protein S6 5557956-5559248 - 430 26991567 purA PP_4889 - - adenylosuccinate synthetase 5651400-5652464 - 354 26991638 fda PP_4960 - COG0191G fructose-bisphosphate aldolase 5742148-5743158 - 336 26991716 fbp PP_5040 - COG0158G fructose-1,6-bisphosphatase 5748150-5749970 - 606 26991720 - PP_5044 - COG1217T GTP-binding protein TypA/BipA 5752024-5753430 + 468 26991722 glnA PP_5046 - - glutamine synthetase, type I 5759538-5760023 - 161 26991729 secB PP_5053 - COG1952U export protein SecB 5774125-5775597 + 490 26991739 betB PP_5063 - COG1012C betaine aldehyde dehydrogenase 5808011-5809279 - 422 26991761 maeB PP_5085 - COG0281C malic enzyme 6002437-6003927 - 496 26991934 - PP_5258 - COG1012C aldehyde dehydrogenase family protein 6039265-6039906 - 213 26991967 pyrE PP_5291 - COG0461F orotate phosphoribosyltransferase 6041192-6041914 - 240 26991970 rph PP_5294 - COG0689J ribonuclease PH 6084881-6086317 + 478 26992014 aspA PP_5338 - COG1027E aspartate ammonia-lyase 6175210-6176586 - 458 26992088 atpD PP_5413 - COG0055C ATP synthase subunit B 6177523-6179067 - 514 26992090 atpA PP_5415 - COG0056C ATP synthase subunit A