Shewanella denitrificans OS217, complete genome - 1..4545906 Location Strand Length PID Gene Synonym Code COG Product 19738-20901 - 387 91791383 - Sden_0014 - COG0183I Acetyl-CoA C-acyltransferase FadA 20924-23152 - 742 91791384 - Sden_0015 - COG1250I,COG1024I Fatty oxidation complex, alpha subunit FadB 179836-180387 + 183 91791527 - Sden_0158 - COG0250K transcription termination/antitermination factor NusG 180516-180944 + 142 91791528 - Sden_0159 - - ribosomal protein L11 180949-181650 + 233 91791529 - Sden_0160 - - ribosomal protein L1 181935-182435 + 166 91791530 - Sden_0161 - COG0244J ribosomal protein L10 182490-182858 + 122 91791531 - Sden_0162 - COG0222J ribosomal protein L7/L12 183091-187122 + 1343 91791532 - Sden_0163 - COG0085K DNA-directed RNA polymerase, beta subunit 187204-191436 + 1410 91791533 - Sden_0164 - COG0086K DNA-directed RNA polymerase, subunit beta-prime 191615-191989 + 124 91791534 - Sden_0165 - - ribosomal protein S12 192070-192540 + 156 91791535 - Sden_0166 - COG0049J ribosomal protein S7 194785-195969 + 394 91791537 - Sden_0168 - COG0050J translation elongation factor Tu 196309-196620 + 103 91791538 - Sden_0169 - COG0051J ribosomal protein S10 196648-197286 + 212 91791539 - Sden_0170 - - ribosomal protein L3 197304-197909 + 201 91791540 - Sden_0171 - - ribosomal protein L4/L1e 197906-198208 + 100 91791541 - Sden_0172 - COG0089J Ribosomal protein L25/L23 198225-199049 + 274 91791542 - Sden_0173 - COG0090J ribosomal protein L2 199704-200393 + 229 91791545 - Sden_0176 - COG0092J ribosomal protein S3 200405-200815 + 136 91791546 - Sden_0177 - COG0197J ribosomal protein L16 200815-201006 + 63 91791547 - Sden_0178 - - ribosomal protein L29 202141-202680 + 179 91791551 - Sden_0182 - COG0094J ribosomal protein L5 202691-202996 + 101 91791552 - Sden_0183 - COG0199J ribosomal protein S14 203021-203413 + 130 91791553 - Sden_0184 - - ribosomal protein S8 203969-204319 + 116 91791555 - Sden_0186 - COG0256J ribosomal protein L18 204331-204834 + 167 91791556 - Sden_0187 - COG0098J ribosomal protein S5 204841-205023 + 60 91791557 - Sden_0188 - COG1841J ribosomal protein L30 205028-205462 + 144 91791558 - Sden_0189 - COG0200J ribosomal protein L15 207435-207827 + 130 91791562 - Sden_0193 - COG0100J ribosomal protein S11 209537-209932 + 131 91791565 - Sden_0196 - COG0203J ribosomal protein L17 357751-358464 + 237 91791686 - Sden_0319 - COG0689J ribonuclease PH 365682-365855 + 57 91791695 - Sden_0328 - COG0267J ribosomal protein L33 493178-493468 + 96 91791786 - Sden_0421 - COG0234O chaperonin Cpn10 493528-495165 + 545 91791787 - Sden_0422 - COG0459O chaperonin GroEL 515109-515414 - 101 91791808 - Sden_0444 - COG2901KL helix-turn-helix, Fis-type 517684-518949 - 421 91791811 - Sden_0447 - COG1158K transcription termination factor Rho 519163-519489 - 108 91791812 - Sden_0448 - COG0526OC thioredoxin 533413-533667 + 84 91791828 - Sden_0464 - - hypothetical protein 536786-537850 + 354 91791832 - Sden_0468 - COG0407H uroporphyrinogen decarboxylase 575953-576381 + 142 91791870 - Sden_0506 - - ribosomal protein L13 576396-576788 + 130 91791871 - Sden_0507 - - ribosomal protein S9 584952-585344 + 130 91791879 - Sden_0515 - COG0360J ribosomal protein S6 585668-585895 + 75 91791881 - Sden_0517 - - ribosomal protein S18 585936-586388 + 150 91791882 - Sden_0518 - COG0359J ribosomal protein L9 599328-599717 + 129 91791895 - Sden_0531 - COG3076S protein of unknown function DUF1260 634886-635659 - 257 91791923 - Sden_0561 - - MltA-interacting MipA 655483-655746 + 87 91791939 - Sden_0577 - COG2841S hypothetical protein 740960-742141 + 393 91792000 - Sden_0638 - - phosphate-selective porin O and P 759236-759508 - 90 91792020 - Sden_0658 - - histone-like DNA-binding protein 786458-788614 + 718 91792046 - Sden_0684 - - hypothetical protein 799566-800834 - 422 91792053 - Sden_0691 - COG0306P phosphate transporter 829567-830370 + 267 91792079 - Sden_0717 - - hypothetical protein 926463-926723 + 86 91792169 - Sden_0807 - - hypothetical protein 947352-948287 + 311 91792187 - Sden_0826 - COG0039C malate dehydrogenase, NAD-dependent 955752-956141 + 129 91792195 - Sden_0834 - COG0509E glycine cleavage system H protein 972421-972669 + 82 91792209 - Sden_0849 - - hypothetical protein 980824-981153 - 109 91792217 - Sden_0857 - - Iojap-related protein 1001740-1001991 - 83 91792237 - Sden_0877 - - hypothetical protein 1057154-1057366 + 70 91792287 - Sden_0927 - - Cold-shock protein, DNA-binding 1071829-1072302 - 157 91792298 - Sden_0938 - - blue (type 1) copper domain 1122287-1123486 + 399 91792343 - Sden_0983 - COG1805C NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 1124276-1124908 + 210 91792345 - Sden_0985 - COG1347C NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 1124914-1125522 + 202 91792346 - Sden_0986 - COG2209C NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 1125569-1126795 + 408 91792347 - Sden_0987 - COG2871C NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 1130476-1131093 + 205 91792353 - Sden_0993 - COG0545O peptidylprolyl isomerase, FKBP-type 1137462-1137761 - 99 91792358 - Sden_0998 - - protein of unknown function UPF0044 1143835-1144167 + 110 91792364 - Sden_1004 - COG1314U preprotein translocase, SecG subunit 1145078-1146577 + 499 91792366 - Sden_1006 - COG0195K transcription termination factor NusA 1146603-1149257 + 884 91792367 - Sden_1007 - COG0532J translation initiation factor IF-2 1150872-1151141 + 89 91792370 - Sden_1010 - - ribosomal protein S15 1164035-1166140 + 701 91792379 - Sden_1019 - COG1185J Polyribonucleotide nucleotidyltransferase 1170024-1171286 + 420 91792383 - Sden_1023 - - nucleoside transporter 1171613-1172500 + 295 91792384 - Sden_1024 - COG3248M nucleoside-specific channel-forming protein, Tsx 1172874-1173650 + 258 91792385 - Sden_1025 - COG0274F deoxyribose-phosphate aldolase 1176420-1177130 + 236 91792388 - Sden_1028 - COG0813F purine nucleoside phosphorylase 1209014-1209817 + 267 91792417 - Sden_1057 - - hypothetical protein 1239191-1241185 + 664 91792443 - Sden_1083 - COG0021G transketolase 1247056-1249143 - 695 91792449 - Sden_1089 - COG3590O Endothelin-converting enzyme 1 1313312-1314565 + 417 91792500 - Sden_1142 - COG0112E Glycine hydroxymethyltransferase 1371042-1372958 + 638 91792540 - Sden_1182 - COG0443O Chaperone DnaK 1393022-1394317 + 431 91792554 - Sden_1196 - COG0148G Phosphopyruvate hydratase 1406529-1407590 + 353 91792566 - Sden_1208 - COG0468L recA protein 1456275-1457600 + 441 91792604 - Sden_1246 - COG2224C isocitrate lyase 1501138-1501617 - 159 91792640 - Sden_1282 - - hypothetical protein 1536030-1536848 + 272 91792673 - Sden_1315 - COG1344N flagellin-like protein 1626021-1626557 + 178 91792753 - Sden_1395 - COG2885M OmpA/MotB 1635013-1635288 + 91 91792760 - Sden_1402 - COG1862U preprotein translocase, YajC subunit 1640820-1643231 - 803 91792767 - Sden_1409 - COG1404O,COG4935O peptidase S8 and S53, subtilisin, kexin, sedolisin 1652141-1652578 - 145 91792774 - Sden_1416 - - hypothetical protein 1666077-1666721 + 214 91792788 - Sden_1430 - COG0563F adenylate kinases 1690071-1690874 - 267 91792811 - Sden_1454 - COG0483G inositol monophosphatase 1693546-1694760 + 404 91792815 - Sden_1458 - COG1104E cysteine desulfurase IscS 1694797-1695180 + 127 91792816 - Sden_1459 - COG0822C FeS cluster assembly scaffold IscU 1742231-1742518 + 95 91792860 - Sden_1503 - COG1825J ribosomal protein L25 1808003-1808731 + 242 91792911 - Sden_1554 - - ribosomal protein S2 1808848-1809699 + 283 91792912 - Sden_1555 - - translation elongation factor Ts 1810605-1811162 + 185 91792914 - Sden_1557 - - ribosome recycling factor 1818179-1818676 + 165 91792920 - Sden_1563 - COG2825M outer membrane chaperone Skp (OmpH) 1848383-1848979 + 198 91792944 - Sden_1588 - - hypothetical protein 1904190-1904774 - 194 91792995 - Sden_1639 - COG0605P Superoxide dismutase 1904996-1905331 + 111 91792996 - Sden_1640 - COG0278O Glutaredoxin-related protein 2009732-2010088 + 118 91793064 - Sden_1708 - - ribosomal protein L20 2016731-2017684 - 317 91793069 - Sden_1713 - COG0492O thioredoxin reductase 2074751-2076484 + 577 91793109 - Sden_1753 - COG0539J ribosomal protein S1 2084415-2086862 - 815 91793120 - Sden_1764 - COG1960I acyl-CoA dehydrogenase-like protein 2115813-2116823 - 336 91793147 - Sden_1791 - COG0057G glyceraldehyde-3-phosphate dehydrogenase, type I 2157091-2159313 + 740 91793187 - Sden_1831 - - isocitrate dehydrogenase, NADP-dependent 2174787-2175743 - 318 91793204 - Sden_1848 - COG2010C cytochrome c oxidase, cbb3-type, subunit III 2354886-2355413 + 175 91793345 - Sden_1990 - COG0716C Flavodoxin, long chain 2356734-2357294 + 186 91793347 - Sden_1992 - COG0231J elongation factor P/YeiP 2485108-2485368 + 86 91793444 - Sden_2090 - COG0695O Glutaredoxin, GrxA 2485482-2486087 - 201 91793445 - Sden_2091 - COG0450O alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2525612-2526064 + 150 91793481 - Sden_2127 - - hypothetical protein 2529823-2531007 + 394 91793486 - Sden_2132 - COG0399M DegT/DnrJ/EryC1/StrS aminotransferase 2531082-2532152 + 356 91793487 - Sden_2133 - COG1454C iron-containing alcohol dehydrogenase 2537177-2538892 - 571 91793491 - Sden_2137 - COG0737F 5'-nucleotidase 2540423-2540905 - 160 91793494 - Sden_2140 - COG1047O peptidylprolyl isomerase, FKBP-type 2542399-2542770 + 123 91793496 - Sden_2142 - - hypothetical protein 2545283-2545465 + 60 91793499 - Sden_2145 - - hypothetical protein 2562082-2563122 + 346 91793517 - Sden_2163 - COG3185ER 4-hydroxyphenylpyruvate dioxygenase 2584838-2585710 - 290 91793534 - Sden_2180 - COG0074C succinyl-CoA synthetase, alpha subunit 2585710-2586876 - 388 91793535 - Sden_2181 - COG0045C succinyl-CoA synthetase, beta subunit 2586952-2588142 - 396 91793536 - Sden_2182 - COG0508C 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 2591205-2591912 - 235 91793538 - Sden_2184 - COG0479C succinate dehydrogenase and fumarate reductase iron-sulfur protein 2591929-2593695 - 588 91793539 - Sden_2185 - COG1053C succinate dehydrogenase, flavoprotein subunit 2594836-2596173 + 445 91793542 - Sden_2189 - COG0372C Citrate synthase I 2703707-2705617 - 636 91793632 - Sden_2280 - COG1166E arginine decarboxylase 2710110-2710319 - 69 91793637 - Sden_2285 - - Cold-shock protein, DNA-binding 2717168-2717401 - 77 91793644 - Sden_2292 - COG0236IQ acyl carrier protein 2721403-2721573 - 56 91793649 - Sden_2297 - COG0333J ribosomal protein L32 2725306-2728614 + 1102 91793654 - Sden_2302 - COG1530J ribonuclease, Rne/Rng family 2765865-2766077 + 70 91793688 - Sden_2336 - - protein of unknown function DUF1414 2833280-2833612 - 110 91793732 - Sden_2380 - COG0718S conserved hypothetical protein 103 2839860-2840222 - 120 91793739 - Sden_2387 - - hypothetical protein 2842195-2842626 - 143 91793742 - Sden_2390 - - Nucleoside-diphosphate kinase 2858561-2861179 + 872 91793756 - Sden_2404 - COG1629P TonB-dependent receptor 2873143-2874813 - 556 91793765 - Sden_2413 - COG0008J glutaminyl-tRNA synthetase 2878373-2878651 - 92 91793769 - Sden_2417 - COG0760O PpiC-type peptidyl-prolyl cis-trans isomerase 2881243-2882490 - 415 91793772 - Sden_2420 - - Tetratricopeptide region 2883115-2883519 - 134 91793774 - Sden_2422 - COG0848U Biopolymer transport protein ExbD/TolR 2884060-2885412 - 450 91793776 - Sden_2424 - COG0811U MotA/TolQ/ExbB proton channel 2885412-2886194 - 260 91793777 - Sden_2425 - - hypothetical protein 2887182-2890082 - 966 91793779 - Sden_2427 - COG1629P TonB-dependent receptor, plug 2970743-2971015 - 90 91793844 - Sden_2492 - - histone-like DNA-binding protein 2975847-2977151 - 434 91793848 - Sden_2496 - COG0544O trigger factor 2980895-2981389 + 164 91793851 - Sden_2499 - COG0652O peptidyl-prolyl cis-trans isomerase, cyclophilin type 2996355-2996741 - 128 91793861 - Sden_2509 - - protein of unknown function DUF1260 3038971-3039378 + 135 91793891 - Sden_2540 - COG2916R histone-like nucleoid-structuring protein H-NS 3049489-3049650 + 53 91793901 - Sden_2550 - - hypothetical protein 3221187-3222140 - 317 91794041 - Sden_2690 - COG3203M porin, Gram-negative type 3229609-3229935 - 108 91794047 - Sden_2696 - - protein of unknown function DUF469 3265422-3265688 + 88 91794077 - Sden_2726 - COG0268J ribosomal protein S20 3273232-3274353 + 373 91794083 - Sden_2732 - COG2885M OmpA/MotB 3274874-3276007 + 377 91794084 - Sden_2733 - COG2885M OmpA/MotB 3285755-3286237 + 160 91794092 - Sden_2741 - COG1047O peptidylprolyl isomerase, FKBP-type 3287506-3287955 + 149 91794095 - Sden_2744 - - cytochrome c, class II 3294684-3295037 - 117 91794102 - Sden_2751 - - ribosomal protein L19 3296386-3296637 - 83 91794105 - Sden_2754 - - ribosomal protein S16 3347237-3347929 + 230 91794152 - Sden_2801 - COG0775F Methylthioadenosine nucleosidase 3362568-3362918 - 116 91794166 - Sden_2815 - COG0316S HesB/YadR/YfhF 3374261-3374527 + 88 91794175 - Sden_2824 - - major outer membrane lipoprotein, putative 3379972-3380187 + 71 91794182 - Sden_2831 - COG0828J ribosomal protein S21 3382604-3384457 + 617 91794185 - Sden_2834 - COG0568K RNA polymerase sigma factor RpoD-like protein 3385001-3385360 + 119 91794186 - Sden_2835 - - hypothetical protein 3405424-3405774 - 116 91794207 - Sden_2856 - - hypothetical protein 3420799-3421560 + 253 91794215 - Sden_2864 - COG4105R putative lipoprotein 3430475-3430942 + 155 91794221 - Sden_2870 - - hypothetical protein 3468765-3471386 - 873 91794256 - Sden_2906 - COG2374R Endonuclease/exonuclease/phosphatase 3473594-3474364 - 256 91794259 - Sden_2909 - COG0545O peptidylprolyl isomerase, FKBP-type 3493721-3493975 - 84 91794276 - Sden_2926 - - ribosomal protein L27 3493992-3494303 - 103 91794277 - Sden_2927 - - ribosomal protein L21 3539567-3541660 - 697 91794308 - Sden_2958 - COG0480J translation elongation factor G 3553535-3554602 - 355 91794318 - Sden_2968 - - hypothetical protein 3617843-3618412 - 189 91794362 - Sden_3012 - COG0450O alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 3653719-3654186 - 155 91794394 - Sden_3044 - - hypothetical protein 3654208-3656319 - 703 91794395 - Sden_3045 - COG1404O,COG4935O peptidase S8 and S53, subtilisin, kexin, sedolisin 3661140-3664802 + 1220 91794400 - Sden_3050 - - protease-associated PA 3692470-3693228 - 252 91794424 - Sden_3074 - COG2820F uridine phosphorylase 3714385-3716892 - 835 91794442 - Sden_3093 - COG3291R,COG4935O,COG1404O peptidase S8 and S53, subtilisin, kexin, sedolisin 3717756-3719252 + 498 91794444 - Sden_3095 - - Curlin associated 3740480-3740713 - 77 91794460 - Sden_3111 - - hypothetical protein 3756582-3758084 - 500 91794476 - Sden_3127 - COG1190J lysyl-tRNA synthetase 3825624-3826841 - 405 91794541 - Sden_3193 - COG4992E acetylornithine and succinylornithine aminotransferases 3831637-3832095 - 152 91794545 - Sden_3197 - - Stringent starvation protein B 3832819-3833514 - 231 91794547 - Sden_3199 - COG2857C cytochrome c1 3833514-3834728 - 404 91794548 - Sden_3200 - COG1290C cytochrome b/b6-like protein 3835770-3836666 - 298 91794550 - Sden_3202 - COG0330O HflC protein 3847172-3847717 - 181 91794560 - Sden_3212 - COG1949A Exonuclease 3860278-3861576 + 432 91794573 - Sden_3225 - COG1538MU Type I secretion outer membrane protein, TolC 3909649-3909819 - 56 91794630 - Sden_3282 - - hypothetical protein 3917296-3919116 + 606 91794638 - Sden_3290 - COG1404O peptidase S8 and S53, subtilisin, kexin, sedolisin 3944411-3945106 - 231 91794661 - Sden_3313 - COG0629L single-strand binding protein 3951048-3952883 + 611 91794665 - Sden_3317 - COG0513LKJ DEAD/DEAH box helicase-like protein 3997359-3997571 - 70 91794702 - Sden_3354 - COG0254J ribosomal protein L31 4020846-4023443 - 865 91794725 - Sden_3377 - COG1049C Aconitate hydratase 4031969-4033399 - 476 91794729 - Sden_3381 - COG1249C Dihydrolipoamide dehydrogenase 4033637-4035535 - 632 91794730 - Sden_3382 - COG0508C Dihydrolipoamide acetyltransferase 4035549-4038209 - 886 91794731 - Sden_3383 - COG2609C 2-oxo-acid dehydrogenase E1 component, homodimeric type 4103367-4103645 + 92 91794781 - Sden_3434 - COG1758K DNA-directed RNA polymerase, omega subunit 4105824-4106207 + 127 91794783 - Sden_3436 - COG0251J YjgF-like protein 4133135-4134544 - 469 91794801 - Sden_3454 - - glutamine synthetase, type I 4135179-4136990 + 603 91794802 - Sden_3455 - COG1217T GTP-binding protein TypA 4155674-4156423 - 249 91794819 - Sden_3472 - - hypothetical protein 4334489-4335682 + 397 91794962 - Sden_3615 - COG0156H 2-amino-3-ketobutyrate coenzyme A ligase 4343305-4343925 + 206 91794969 - Sden_3622 - COG2863C cytochrome c, class I 4358870-4359670 - 266 91794986 - Sden_3639 - COG1344N flagellin-like protein 4367046-4368254 - 402 91794995 - Sden_3648 - COG1749N flagellar basal body FlaE