Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, complete genome - 1..4585229 Location Strand Length PID Gene Synonym Code COG Product 190-255 + 21 56412277 thrL SPA0001 - - thr operon leader peptide 7664-8617 + 317 56412282 talB SPA0007 - - transaldolase 11594-13510 + 638 56412287 dnaK SPA0012 - COG0443O molecular chaperone DnaK 64804-66570 - 588 56412328 oadA SPA0056 - COG1038C,COG5016C oxaloacetate decarboxylase 76798-80025 + 1075 56412339 carB SPA0068 - COG0458EF carbamoyl-phosphate synthase large subunit 157187-158338 + 383 56412405 ftsZ SPA0135 - COG0206D cell division protein FtsZ 160194-162899 + 901 56412408 secA SPA0138 - COG0653U translocase 179470-182133 + 887 56412426 aceE SPA0156 - COG2609C pyruvate dehydrogenase E1 component 182148-184037 + 629 56412427 aceF SPA0157 - COG0508C dihydrolipoamide acetyltransferase 184239-185663 + 474 56412428 lpdA SPA0158 - COG1249C dihydrolipoamide dehydrogenase 189095-191692 + 865 56412432 acnB SPA0162 - COG1049C aconitate hydratase 203093-203629 + 178 56412443 hpt SPA0173 - COG0634F hypoxanthine-guanine phosphoribosyltransferase 215257-215637 - 126 56412456 panD SPA0186 - - aspartate 1-decarboxylase precursor 234923-235483 + 186 56412470 stfA SPA0201 - COG3539NU putative fimbrial subunit 253561-254385 - 274 56412486 dapD SPA0219 - COG2171E 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 257200-257994 - 264 56412488 map SPA0221 - COG0024J methionine aminopeptidase 258445-259170 + 241 56412489 rpsB SPA0223 - - 30S ribosomal protein S2 259428-260279 + 283 56412490 tsf SPA0224 - - elongation factor Ts 260424-261149 + 241 56412491 pyrH SPA0225 - COG0528F uridylate kinase 261296-261853 + 185 56412492 frr SPA0226 - - ribosome releasing factor 308870-309253 + 127 56412531 yfiD SPA0272 - COG3445R hypothetical protein 342668-343006 + 112 56412562 glnB SPA0305 - COG0347E nitrogen regulatory protein p-II 351730-352983 + 417 56412567 glyA SPA0311 - COG0112E serine hydroxymethyltransferase 361426-362229 - 267 56412576 suhB SPA0320 - COG0483G extragenic suppressor protein SuhB 363932-365146 + 404 56412579 nifS SPA0323 - COG1104E cysteine desulfurase 365174-365560 + 128 56412580 nifU SPA0324 - COG0822C NifU-like protein 420292-421758 + 488 56412607 guaB SPA0356 - COG0516F,COG0517R inositol-5-monophosphate dehydrogenase 421828-423405 + 525 56412608 guaA SPA0357 - COG0518F,COG0519F bifunctional GMP synthase/glutamine amidotransferase protein 500309-500818 - 169 56412680 crr SPA0432 - - glucose-specific PTS system enzyme IIA component 502635-502892 - 85 56412682 ptsH SPA0434 - COG1925G phosphocarrier protein HPr 511700-513115 + 471 56412690 gltX SPA0446 - COG0008J glutamyl-tRNA synthetase 558073-559287 + 404 56412725 fabB SPA0486 - COG0304IQ 3-oxoacyl-(acyl carrier protein) synthase 596547-598691 - 714 56412765 pta SPA0526 - COG0280C,COG0857R phosphate acetyltransferase 598768-599970 - 400 56412766 ackA SPA0527 - COG0282C acetate/propionate kinase 611931-613268 + 445 56412779 nuoF SPA0540 - COG1894C NADH dehydrogenase I chain F 613293-616025 + 910 56412780 nuoG SPA0541 - COG1034C NADH dehydrogenase gamma subunit 622226-623503 + 425 56412787 nuoN SPA0548 - COG1007C NADH dehydrogenase subunit N 630435-631292 + 285 56412795 menB SPA0556 - COG0447H naphthoate synthase 668921-671557 + 878 56412831 gyrA SPA0592 - COG0188L DNA gyrase subunit A 678689-679825 + 378 56412835 ompC SPA0597 - COG3203M outer membrane protein C 692223-692879 + 218 56412849 ccmB SPA0611 - COG2386O heme exporter protein B1 704403-704687 - 94 56412863 rplY SPA0626 - COG1825J 50S ribosomal protein L25 779500-781533 - 677 56412932 metG SPA0697 - COG0073R,COG0143J methionyl-tRNA synthetase 911652-911987 + 111 56413039 yeeX SPA0812 - - hypothetical protein 926204-927868 - 554 56413058 pduC SPA0831 - - glycerol dehydratase large subunit 927887-928588 - 233 56413059 pduB SPA0832 - - putative propanediol utilization protein PduB 960192-961370 - 392 56413094 ompS SPA0875 - COG3203M outer membrane protein S1 1040902-1042674 + 590 56413180 aspS SPA0968 - COG0173J aspartyl-tRNA synthetase 1043259-1043999 + 246 56413182 yebC SPA0970 - - hypothetical protein 1106376-1106585 + 69 56413244 cspC SPA1036 - - cold shock-like protein CspC 1163417-1164364 - 315 56413299 prsA SPA1093 - COG0462FE ribose-phosphate pyrophosphokinase 1170864-1171718 + 284 56413307 kdsA SPA1101 - COG2877M 2-dehydro-3-deoxyphosphooctonate aldolase 1183710-1185245 + 511 56413315 narH SPA1110 - COG1140C respiratory nitrate reductase 1 beta chain 1196525-1199203 - 892 56413327 adh SPA1129 - COG1012C,COG1454C alcohol dehydrogenase 1373950-1375038 - 362 56413481 nmpC SPA1296 - COG3203M new outer membrane protein; predicted bacterial porin 1461466-1462617 + 383 56413561 ompN SPA1382 - COG3203M outer membrane protein 1550958-1552370 + 470 56413649 pykF SPA1475 - - pyruvate kinase 1552681-1552917 + 78 56413650 lppA SPA1476 - - major outer membrane lipoprotein 1583464-1583820 - 118 56413677 rplT SPA1507 - - 50S ribosomal protein L20 1583871-1584068 - 65 56413678 rpmI SPA1508 - COG0291J 50S ribosomal protein L35 1629151-1630146 + 331 56413724 gapA SPA1554 - COG0057G glyceraldehyde-3-phosphate dehydrogenase 1712389-1713822 - 477 56413811 ptsG SPA1648 - COG1263G PTS system, glucose-specific IIBC component 1719842-1720078 - 78 56413818 acpP SPA1655 - COG0236IQ acyl carrier protein 1724172-1724345 - 57 56413823 rpmF SPA1660 - COG0333J 50S ribosomal protein L32 1807352-1808818 - 488 56413905 hpaE SPA1748 - COG1012C 4-hydroxyphenylacetate catabolism 1836306-1837358 + 350 56413933 ompA SPA1780 - COG2885M outer membrane protein A 1861612-1862703 + 363 56413952 ompF SPA1799 - COG3203M outer membrane protein F precursor 1885026-1886699 - 557 56413969 rpsA SPA1817 - COG0539J 30S ribosomal protein S1 1895112-1897394 + 760 56413977 pflB SPA1825 - COG1882C formate acetyltransferase 1 1939055-1940707 + 550 56414010 hcp SPA1862 - - hydroxylamine reductase 2000822-2001337 - 171 56414068 ompX SPA1920 - COG3637M outer membrane protein X 2010150-2010410 + 86 56414077 ybiJ SPA1930 - - hypothetical protein 2072705-2073229 - 174 56414134 pal SPA1994 - COG2885M peptidoglycan-associated lipoprotein precursor 2082598-2083467 - 289 56414144 sucD SPA2004 - COG0074C succinyl-CoA synthetase alpha subunit 2083467-2084633 - 388 56414145 sucC SPA2005 - COG0045C succinyl-CoA synthetase subunit beta 2084775-2085983 - 402 56414146 sucB SPA2006 - COG0508C dihydrolipoamide acetyltransferase 2090058-2091824 - 588 56414149 sdhA SPA2009 - COG1053C succinate dehydrogenase catalytic subunit 2141671-2143338 - 555 56414194 glnS SPA2055 - COG0008J glutaminyl-tRNA synthetase 2170757-2173339 + 860 56414217 leuS SPA2086 - COG0495J leucyl-tRNA synthetase 2197092-2198621 + 509 56414243 citF SPA2113 - COG3051C citrate lyase alpha chain 2211480-2212043 - 187 56414255 ahpC SPA2126 - COG0450O alkyl hydroperoxide reductase c22 protein 2274390-2274884 + 164 56414313 ppiB SPA2187 - COG0652O peptidyl-prolyl cis-trans isomerase B 2326380-2327024 - 214 56414357 adk SPA2234 - COG0563F adenylate kinase 2327671-2329569 - 632 56414358 htpG SPA2235 - COG0326O heat shock protein 90 2367752-2369023 - 423 56414395 clpX SPA2273 - COG1219O ATP-dependent protease ATP-binding subunit 2370145-2371443 - 432 56414397 tig SPA2275 - COG0544O trigger factor 2404650-2405513 + 287 56414432 tsx SPA2310 - COG3248M nucleoside-specific channel-forming protein tsx precursor 2410744-2411076 - 110 56414439 yajC SPA2317 - COG1862U preprotein translocase subunit YajC 2414372-2414974 + 200 56414443 - SPA2321 - COG0450O probable peroxidase 2632718-2633065 - 115 56414638 rplS SPA2532 - - 50S ribosomal protein L19 2634485-2634733 - 82 56414641 rpsP SPA2535 - - 30S ribosomal protein S16 2679379-2680443 - 354 56414684 - SPA2580 - - putative major capsid protein 2808764-2809306 - 180 56414800 hycF SPA2706 - COG1143C hydrogenase 4 Fe-S subunit 2809316-2811025 - 569 56414801 hycE SPA2707 - COG3261C,COG3262C formate hydrogenlyase subunit 5 2901162-2902874 - 570 56414892 cysI SPA2803 - COG0155P sulfite reductase (NADPH) hemoprotein alpha subunit 2907768-2909066 - 432 56414896 eno SPA2809 - COG0148G phosphopyruvate hydratase 2938407-2939696 + 429 56414919 sdaC SPA2834 - COG0814E putative serine transporter 3016839-3018356 - 505 56414986 lysS SPA2908 - COG1190J lysyl-tRNA synthetase 3032794-3033183 - 129 56415000 gcvH SPA2922 - COG0509E glycine cleavage system protein H 3047129-3048208 - 359 56415014 fba SPA2939 - COG0191G fructose-bisphosphate aldolase 3048310-3049473 - 387 56415015 pgk SPA2940 - - phosphoglycerate kinase 3054011-3056002 - 663 56415022 tktA SPA2947 - COG0021G transketolase 3057137-3058057 - 306 56415024 speB SPA2949 - COG0010E agmatinase 3061051-3062205 + 384 56415028 metK SPA2953 - COG0192H S-adenosylmethionine synthetase 3150834-3151226 - 130 56415117 ygiW SPA3045 - - possible exported protein 3184513-3184728 + 71 56415149 rpsU SPA3077 - COG0828J 30S ribosomal protein S21 3254940-3256829 - 629 56415212 deaD SPA3147 - COG0513LKJ ATP-dependent RNA helicase 3258002-3260137 - 711 56415214 pnp SPA3149 - COG1185J polynucleotide phosphorylase 3260379-3260648 - 89 56415215 rpsO SPA3151 - - 30S ribosomal protein S15 3261743-3262144 - 133 56415217 rbfA SPA3153 - COG0858J ribosome-binding factor A 3262365-3265043 - 892 56415218 infB SPA3154 - COG0532J translation initiation factor IF-2 3265068-3266570 - 500 56415219 nusA SPA3155 - COG0195K transcription elongation factor NusA 3272157-3274091 - 644 56415225 ftsH SPA3163 - COG0465O cell division protein 3277685-3278857 - 390 56415230 yhbZ SPA3168 - COG0536R probable GTP-binding protein 3279968-3280225 - 85 56415232 rpmA SPA3170 - - 50S ribosomal protein L27 3280245-3280556 - 103 56415233 rplU SPA3171 - - 50S ribosomal protein L21 3318966-3319358 - 130 56415272 rpsI SPA3211 - - 30S ribosomal protein S9 3319374-3319802 - 142 56415273 rplM SPA3212 - - 50S ribosomal protein L13 3326586-3328352 - 588 56415280 oadA SPA3219 - COG5016C,COG1038C oxaloacetate decarboxylase 3350040-3351083 - 347 56415301 mreB SPA3241 - COG1077D rod shape-determining protein 3357100-3358449 + 449 56415307 accC SPA3247 - COG0439I acetyl-CoA carboxylase 3393753-3394187 - 144 56415340 rplO SPA3287 - COG0200J 50S ribosomal protein L15 3394374-3394877 - 167 56415342 rpsE SPA3289 - COG0098J 30S ribosomal protein S5 3395801-3396193 - 130 56415345 rpsH SPA3292 - - 30S ribosomal protein S8 3397101-3397415 - 104 56415348 rplX SPA3295 - COG0198J 50S ribosomal protein L24 3397961-3398215 - 84 56415350 rpsQ SPA3297 - COG0186J 30S ribosomal protein S17 3398829-3399530 - 233 56415353 rpsC SPA3300 - COG0092J 30S ribosomal protein S3 3399548-3399880 - 110 56415354 rplV SPA3301 - - 50S ribosomal protein L22 3400190-3401011 - 273 56415356 rplB SPA3303 - COG0090J 50S ribosomal protein L2 3401029-3401331 - 100 56415357 rplW SPA3304 - COG0089J 50S ribosomal protein L23 3401328-3401933 - 201 56415358 rplD SPA3305 - - 50S ribosomal protein L4 3401944-3402573 - 209 56415359 rplC SPA3306 - - 50S ribosomal protein L3 3402606-3402917 - 103 56415360 rpsJ SPA3307 - COG0051J 30S ribosomal protein S10 3404689-3405873 - 394 56415364 tuf SPA3311 - COG0050J elongation factor Tu 3405945-3408059 - 704 56415365 fusA SPA3312 - COG0480J elongation factor EF-2 3408156-3408626 - 156 56415366 rpsG SPA3313 - COG0049J 30S ribosomal protein S7 3408722-3409096 - 124 56415367 rpsL SPA3314 - - 30S ribosomal protein S12 3412704-3413294 - 196 56415374 slyD SPA3321 - COG1047O FKBP-type peptidyl-prolyl cis-trans isomerase 3429904-3432447 + 847 56415392 nirB SPA3340 - COG1251C nitrite reductase large subunit 3557519-3557953 + 144 56415496 uspA SPA3448 - COG0589T universal stress protein A 3565259-3566611 + 450 56415503 gor SPA3455 - COG1249C glutathione reductase 3624053-3624265 + 70 56415543 cspA SPA3501 - - cold shock protein 3627721-3629790 - 689 56415548 glyS SPA3506 - COG0751J glycyl-tRNA synthetase beta subunit 3629800-3630711 - 303 56415549 glyQ SPA3507 - - glycyl-tRNA synthetase alpha subunit 3663274-3665190 + 638 56415577 mtlA SPA3536 - COG4668G,COG2213G mannitol-specific enzyme II of phosphotransferase system 3685530-3687053 + 507 56415594 pmgI SPA3556 - COG0696G phosphoglyceromutase 3690828-3691853 - 341 56415598 tdh SPA3560 - COG1063ER L-threonine 3-dehydrogenase 3693262-3694194 + 310 56415600 rfaD SPA3562 - COG0451MG ADP-L-Glycero-D-mannoheptose-6-epimerase 3710697-3710864 - 55 56415617 rpmG SPA3579 - COG0267J 50S ribosomal protein L33 3710885-3711121 - 78 56415618 rpmB SPA3580 - COG0227J 50S ribosomal protein L28 3805380-3806039 - 219 56415698 ccmB SPA3668 - COG2386O heme exporter protein B1 3820806-3823220 - 804 56415708 gyrB SPA3679 - COG0187L DNA gyrase subunit B 3827636-3827776 + 46 56415712 rpmH SPA3683 - COG0230J 50S ribosomal protein L34 3837634-3838359 - 241 56415723 phoU SPA3694 - COG0704P phosphate transport system regulatory protein 3844054-3845883 - 609 56415729 glmS SPA3700 - COG0449M D-fructose-6-phosphate amidotransferase 3849130-3850512 - 460 56415733 atpD SPA3704 - COG0055C ATP synthase subunit B 3851453-3852994 - 513 56415735 atpA SPA3706 - COG0056C ATP synthase subunit A 3854085-3854324 - 79 56415738 atpE SPA3709 - COG0636C ATP synthase subunit C 3869609-3870499 + 296 56415751 rbsB SPA3723 - COG1879G D-ribose-binding periplasmic protein 3893024-3894499 + 491 56415768 ilvC SPA3748 - COG0059EH ketol-acid reductoisomerase 3993664-3995073 - 469 56415853 glnA SPA3848 - - glutamine synthetase 3995449-3997272 + 607 56415855 typA SPA3850 - COG1217T GTP-binding protein 4044575-4045195 + 206 56415901 sodA SPA3898 - COG0605P manganese superoxide dismutase 4050367-4051329 + 320 56415908 pfkA SPA3905 - COG0205G 6-phosphofructokinase 4068311-4069078 - 255 56415926 tpiA SPA3924 - COG0149G triosephosphate isomerase 4077198-4078529 - 443 56415935 hslU SPA3934 - COG1220O ATP-dependent protease ATP-binding subunit 4083808-4084020 + 70 56415940 rpmE SPA3939 - COG0254J 50S ribosomal protein L31 4134232-4135416 + 394 56415973 tuf SPA3984 - COG0050J elongation factor Tu 4136031-4136576 + 181 56415975 nusG SPA3986 - COG0250K transcription antitermination protein NusG 4136734-4137162 + 142 56415976 rplK SPA3987 - - 50S ribosomal protein L11 4137166-4137870 + 234 56415977 rplA SPA3988 - - 50S ribosomal protein L1 4138286-4138783 + 165 56415978 rplJ SPA3989 - COG0244J 50S ribosomal protein L10 4138850-4139215 + 121 56415979 rplL SPA3990 - COG0222J 50S ribosomal protein L7/L12 4139533-4143561 + 1342 56415980 rpoB SPA3991 - COG0085K DNA-directed RNA polymerase beta subunit 4143638-4147861 + 1407 56415981 rpoC SPA3992 - COG0086K DNA-directed RNA polymerase beta' subunit 4159015-4159287 + 90 56415996 hupA SPA4007 - - histone like DNA-binding protein HU-alpha (NS2) (HU-2) 4163467-4164756 - 429 56416001 purD SPA4012 - COG0151F phosphoribosylamine--glycine ligase 4164768-4166357 - 529 56416002 purH SPA4013 - - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4180422-4184105 + 1227 56416009 metH SPA4026 - COG0646E,COG1410E B12-dependent methionine synthase 4194933-4196582 + 549 56416021 pgi SPA4038 - COG0166G glucose-6-phosphate isomerase 4216261-4216473 + 70 56416040 yjbJ SPA4057 - COG3237S hypothetical protein 4282100-4282435 - 111 56416088 phnA SPA4107 - COG2824P hypothetical protein 4320684-4322120 - 478 56416120 aspA SPA4142 - COG1027E aspartate ammonia-lyase 4324513-4324806 + 97 56416124 groES SPA4146 - COG0234O co-chaperonin GroES 4324850-4326496 + 548 56416125 groEL SPA4147 - COG0459O chaperonin GroEL 4329349-4329915 + 188 56416129 efp SPA4151 - COG0231J elongation factor P 4333721-4335511 - 596 56416138 frdA SPA4160 - COG1053C fumarate reductase 4357543-4358547 + 334 56416155 hflC SPA4181 - COG0330O HflC protein 4358926-4360224 + 432 56416157 purA SPA4183 - - adenylosuccinate synthetase 4376469-4377119 + 216 56416177 sgaH SPA4203 - COG0269G putative hexulose-6-phosphate synthase 4379544-4379939 + 131 56416182 rpsF SPA4208 - COG0360J 30S ribosomal protein S6 4380265-4380492 + 75 56416184 rpsR SPA4210 - - 30S ribosomal protein S18 4380534-4380983 + 149 56416185 rplI SPA4211 - COG0359J 50S ribosomal protein L9 4407317-4407847 - 176 56416207 ppa SPA4234 - COG0221C inorganic pyrophosphatase 4433107-4433493 - 128 56416230 yjgF SPA4259 - COG0251J hypothetical protein 4447086-4449941 - 951 56416247 valS SPA4276 - COG0525J valyl-tRNA synthetase