Shewanella frigidimarina NCIMB 400, complete genome - 1..4845257 Location Strand Length PID Gene Synonym Code COG Product 15577-16740 - 387 114561200 - Sfri_0012 - - acetyl-CoA C-acyltransferase FadA 70083-72932 + 949 114561245 - Sfri_0057 - - Twin-arginine translocation pathway signal 152246-153430 + 394 114561322 - Sfri_0134 - - translation elongation factor Tu 154081-154632 + 183 114561324 - Sfri_0136 - - NusG antitermination factor 154762-155190 + 142 114561325 - Sfri_0137 - - ribosomal protein L11 155195-155896 + 233 114561326 - Sfri_0138 - - ribosomal protein L1 156728-157093 + 121 114561328 - Sfri_0140 - - ribosomal protein L7/L12 157329-161360 + 1343 114561329 - Sfri_0141 - - DNA-directed RNA polymerase, beta subunit 161443-165669 + 1408 114561330 - Sfri_0142 - - DNA-directed RNA polymerase, beta' subunit 165847-166221 + 124 114561331 - Sfri_0143 - - ribosomal protein S12 169019-170203 + 394 114561334 - Sfri_0146 - - translation elongation factor Tu 170896-171534 + 212 114561336 - Sfri_0148 - - ribosomal protein L3 172154-172456 + 100 114561338 - Sfri_0150 - - Ribosomal protein L25/L23 173951-174640 + 229 114561342 - Sfri_0154 - - ribosomal protein S3 176935-177240 + 101 114561349 - Sfri_0161 - - ribosomal protein S14 181683-182075 + 130 114561359 - Sfri_0171 - - ribosomal protein S11 183783-184178 + 131 114561362 - Sfri_0174 - - ribosomal protein L17 188342-188635 + 97 114561368 - Sfri_0180 - - cytochrome c, class I 213206-214429 + 407 114561382 - Sfri_0194 - - Argininosuccinate synthase 343068-343559 + 163 114561501 - Sfri_0313 - - spheroplast protein y precursor, putative 353180-354991 - 603 114561512 - Sfri_0324 - - GTP-binding protein TypA 355472-356881 + 469 114561513 - Sfri_0325 - - glutamine synthetase, type I 393881-394159 - 92 114561552 - Sfri_0364 - - DNA-directed RNA polymerase, omega subunit 459222-460703 + 493 114561608 - Sfri_0421 - - ketol-acid reductoisomerase 519454-519759 - 101 114561640 - Sfri_0453 - - helix-turn-helix, Fis-type 544348-544596 + 82 114561665 - Sfri_0478 - - hypothetical protein 547769-548833 + 354 114561669 - Sfri_0482 - - uroporphyrinogen decarboxylase 557680-557898 - 72 114561678 - Sfri_0491 - - hypothetical protein 569378-570421 - 347 114561689 - Sfri_0503 - - porin, Gram-negative type 582403-586041 - 1212 114561699 - Sfri_0513 - - peptidase S8 and S53, subtilisin, kexin, sedolisin 592539-593108 + 189 114561708 - Sfri_0522 - - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 610595-611311 - 238 114561719 - Sfri_0533 - - two component transcriptional regulator, winged helix family protein 634530-636623 + 697 114561736 - Sfri_0550 - - translation elongation factor G 677097-678599 + 500 114561769 - Sfri_0583 - - lysyl-tRNA synthetase 725629-727020 + 463 114561807 - Sfri_0622 - - Nitrite reductase (cytochrome; ammonia-forming) 733134-733310 - 58 114561814 - Sfri_0629 - - hypothetical protein 748322-749473 - 383 114561831 - Sfri_0646 - - Methionine adenosyltransferase 749965-752007 + 680 114561832 - Sfri_0647 - - transketolase 753293-754468 + 391 114561834 - Sfri_0649 - - Phosphoglycerate kinase 754624-755688 + 354 114561835 - Sfri_0650 - - fructose-bisphosphate aldolase, class II, Calvin cycle subtype 757337-758077 + 246 114561837 - Sfri_0652 - - protein of unknown function DUF481 841979-843070 + 363 114561900 - Sfri_0717 - - GTP-binding protein YchF 851829-852224 + 131 114561908 - Sfri_0725 - - Invasion gene expression up-regulator, SirB 861223-861435 + 70 114561918 - Sfri_0735 - - cold-shock DNA-binding domain protein 874696-875238 + 180 114561927 - Sfri_0745 - - hypothetical protein 913591-913731 - 46 114561959 - Sfri_0778 - - hypothetical protein 968130-968453 + 107 114562002 - Sfri_0822 - - hypothetical protein 974405-974680 + 91 114562007 - Sfri_0829 - - protein of unknown function DUF1458 989013-991100 - 695 114562020 - Sfri_0842 - - Endothelin-converting enzyme 1 1065336-1065794 - 152 114562083 - Sfri_0905 - - putative lipoprotein 1073125-1075437 + 770 114562091 - Sfri_0913 - - decaheme cytochrome c 1114039-1114647 + 202 114562131 - Sfri_0953 - - NADH:ubiquinone oxidoreductase, subunit E 1114694-1115941 + 415 114562132 - Sfri_0954 - - NADH:ubiquinone oxidoreductase, subunit F 1118103-1118570 + 155 114562136 - Sfri_0958 - - bacterioferritin 1130511-1132427 + 638 114562147 - Sfri_0969 - - chaperone protein DnaK 1136013-1136630 + 205 114562151 - Sfri_0973 - - peptidylprolyl isomerase, FKBP-type 1155871-1158516 + 881 114562168 - Sfri_0990 - - translation initiation factor IF-2 1160109-1160378 + 89 114562171 - Sfri_0993 - - ribosomal protein S15 1163942-1166038 + 698 114562173 - Sfri_0995 - - Polyribonucleotide nucleotidyltransferase 1169967-1171229 + 420 114562178 - Sfri_1000 - - nucleoside transporter 1171592-1172431 + 279 114562179 - Sfri_1001 - - nucleoside-specific channel-forming protein, Tsx 1172811-1173584 + 257 114562180 - Sfri_1002 - - deoxyribose-phosphate aldolase 1175056-1176273 + 405 114562182 - Sfri_1004 - - phosphopentomutase 1176375-1177085 + 236 114562183 - Sfri_1005 - - purine nucleoside phosphorylase 1217872-1219125 + 417 114562211 - Sfri_1033 - - Glycine hydroxymethyltransferase 1240136-1241437 + 433 114562230 - Sfri_1052 - - Phosphopyruvate hydratase 1302210-1303526 + 438 114562280 - Sfri_1102 - - isocitrate lyase 1310200-1310502 - 100 114562288 - Sfri_1110 - - NrfJ-related protein 1504247-1504975 + 242 114562448 - Sfri_1270 - - ribosomal protein S2 1505093-1505944 + 283 114562449 - Sfri_1271 - - translation elongation factor Ts 1506013-1506750 + 245 114562450 - Sfri_1272 - - uridylate kinase 1506870-1507427 + 185 114562451 - Sfri_1273 - - ribosome recycling factor 1514370-1514867 + 165 114562457 - Sfri_1279 - - outer membrane chaperone Skp (OmpH) 1562246-1565182 - 978 114562491 - Sfri_1313 - - TonB-dependent receptor, plug 1657707-1658945 + 412 114562568 - Sfri_1391 - - beta-ketoacyl synthase 1681272-1681928 + 218 114562586 - Sfri_1409 - - nitroreductase 1695939-1696238 - 99 114562598 - Sfri_1421 - - YCII-related 1719245-1719532 + 95 114562619 - Sfri_1442 - - ribosomal protein L25 1739795-1740400 + 201 114562632 - Sfri_1455 - - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1747435-1747971 + 178 114562640 - Sfri_1463 - - OmpA/MotB domain protein 1751949-1752209 - 86 114562643 - Sfri_1466 - - Glutaredoxin, GrxA family protein 1770741-1771169 - 142 114562658 - Sfri_1481 - - protein of unknown function DUF413 1786057-1786227 + 56 114562671 - Sfri_1495 - - ribosomal protein L32 1790119-1790352 + 77 114562676 - Sfri_1500 - - acyl carrier protein 1793665-1794000 + 111 114562680 - Sfri_1504 - - cytochrome c3 1833236-1833880 + 214 114562716 - Sfri_1540 - - adenylate kinases 1873912-1874175 - 87 114562747 - Sfri_1571 - - hypothetical protein 1999531-1999737 + 68 114562869 - Sfri_1693 - - cold-shock DNA-binding domain protein 2055788-2056372 - 194 114562922 - Sfri_1747 - - Superoxide dismutase 2056608-2056949 + 113 114562923 - Sfri_1748 - - glutaredoxin-like protein 2066751-2066984 - 77 114562933 - Sfri_1758 - - hypothetical protein 2067887-2068957 - 356 114562935 - Sfri_1760 - - iron-containing alcohol dehydrogenase 2069029-2070213 - 394 114562936 - Sfri_1761 - - DegT/DnrJ/EryC1/StrS aminotransferase 2094854-2095096 + 80 114562958 - Sfri_1783 - - hypothetical protein 2101253-2103973 - 906 114562962 - Sfri_1787 - - TonB-dependent receptor 2114600-2115736 - 378 114562968 - Sfri_1793 - - alanine dehydrogenase 2205104-2206201 + 365 114563038 - Sfri_1865 - - NlpBDapX family lipoprotein 2235850-2237289 - 479 114563061 - Sfri_1890 - - Pyruvate kinase 2260064-2260624 - 186 114563079 - Sfri_1908 - - Elongation factor P/YeiP protein 2261955-2262482 - 175 114563081 - Sfri_1910 - - flavodoxin 2291327-2292280 - 317 114563103 - Sfri_1932 - - thioredoxin reductase 2302010-2303020 - 336 114563111 - Sfri_1940 - - glyceraldehyde-3-phosphate dehydrogenase, type I 2307490-2308197 - 235 114563115 - Sfri_1944 - - hypothetical protein 2384851-2385477 + 208 114563182 - Sfri_2011 - - cytochrome c oxidase, cbb3-type, subunit II 2385663-2386637 + 324 114563184 - Sfri_2013 - - cytochrome c oxidase, cbb3-type, subunit III 2389681-2389995 + 104 114563187 - Sfri_2016 - - cytochrome oxidase maturation protein, cbb3-type 2398541-2398900 - 119 114563196 - Sfri_2025 - - ribosomal protein L20 2398917-2399111 - 64 114563197 - Sfri_2026 - - ribosomal protein L35 2472836-2473714 + 292 114563251 - Sfri_2080 - - 6-phosphogluconate dehydrogenase, NAD-binding 2523852-2525519 - 555 114563294 - Sfri_2123 - - ribosomal protein S1 2590807-2592207 + 466 114563340 - Sfri_2169 - - asparaginyl-tRNA synthetase 2609808-2611583 - 591 114563355 - Sfri_2184 - - aspartyl-tRNA synthetase 2702003-2704228 - 741 114563428 - Sfri_2257 - - isocitrate dehydrogenase, NADP-dependent 2752962-2754680 - 572 114563480 - Sfri_2309 - - 5'-nucleotidase 2756118-2756600 - 160 114563483 - Sfri_2312 - - peptidylprolyl isomerase, FKBP-type 2758384-2758791 + 135 114563485 - Sfri_2314 - - hypothetical protein 2763749-2763922 + 57 114563491 - Sfri_2320 - - hypothetical protein 2769898-2770938 + 346 114563498 - Sfri_2327 - - 4-hydroxyphenylpyruvate dioxygenase 2778131-2778526 + 131 114563504 - Sfri_2333 - - hypothetical protein 2781380-2783479 + 699 114563506 - Sfri_2335 - - 5'-Nucleotidase domain protein 2786728-2787600 - 290 114563511 - Sfri_2340 - - succinyl-CoA synthetase, alpha subunit 2787600-2788766 - 388 114563512 - Sfri_2341 - - succinyl-CoA synthetase, beta subunit 2788842-2790038 - 398 114563513 - Sfri_2342 - - 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 2793092-2793799 - 235 114563515 - Sfri_2344 - - succinate dehydrogenase and fumarate reductase iron-sulfur protein 2793816-2795582 - 588 114563516 - Sfri_2345 - - succinate dehydrogenase, flavoprotein subunit 2796729-2798015 + 428 114563519 - Sfri_2348 - - citrate synthase I 2811466-2811945 - 159 114563531 - Sfri_2361 - - protein of unknown function DUF796 2870490-2870762 + 90 114563575 - Sfri_2405 - - hypothetical protein 2870824-2871156 - 110 114563576 - Sfri_2406 - - conserved hypothetical protein 103 2877423-2877851 - 142 114563583 - Sfri_2413 - - hypothetical protein 2879956-2882484 - 842 114563586 - Sfri_2416 - - TonB-dependent receptor 2883277-2883771 - 164 114563587 - Sfri_2417 - - Nucleoside-diphosphate kinase 2888138-2888521 - 127 114563593 - Sfri_2423 - - FeS cluster assembly scaffold IscU 2888594-2889808 - 404 114563594 - Sfri_2424 - - cysteine desulfurase IscS 2892297-2893100 + 267 114563598 - Sfri_2428 - - inositol monophosphatase 2940560-2941525 + 321 114563638 - Sfri_2468 - - cysteine synthase A 2951431-2953713 + 760 114563643 - Sfri_2473 - - formate acetyltransferase 3057523-3060012 - 829 114563720 - Sfri_2553 - - periplasmic nitrate reductase, large subunit 3100782-3101057 - 91 114563759 - Sfri_2593 - - histone family protein DNA-binding protein 3105915-3107219 - 434 114563763 - Sfri_2597 - - trigger factor 3110708-3111202 + 164 114563766 - Sfri_2600 - - peptidyl-prolyl cis-trans isomerase, cyclophilin type 3136860-3138107 - 415 114563787 - Sfri_2621 - - Tetratricopeptide domain protein 3139674-3141029 - 451 114563791 - Sfri_2625 - - MotA/TolQ/ExbB proton channel 3143255-3145861 - 868 114563794 - Sfri_2628 - - TonB-dependent receptor 3189889-3190404 + 171 114563822 - Sfri_2656 - - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 3199965-3200243 - 92 114563830 - Sfri_2664 - - hypothetical protein 3246408-3247532 - 374 114563867 - Sfri_2702 - - queuine tRNA-ribosyltransferase 3265560-3266579 + 339 114563880 - Sfri_2715 - - TRAP dicarboxylate transporter, DctP subunit 3305422-3305832 + 136 114563914 - Sfri_2749 - - histone family protein nucleoid-structuring protein H-NS 3318558-3318728 + 56 114563927 - Sfri_2762 - - hypothetical protein 3325621-3326592 - 323 114563931 - Sfri_2766 - - phosphate binding protein 3329800-3330744 - 314 114563934 - Sfri_2769 - - porin, Gram-negative type 3349452-3349676 + 74 114563949 - Sfri_2784 - - hypothetical protein 3438654-3439757 - 367 114564018 - Sfri_2854 - - hypothetical protein 3454727-3455053 - 108 114564035 - Sfri_2871 - - protein of unknown function DUF469 3457163-3457441 + 92 114564038 - Sfri_2874 - - Fe(II) trafficking protein YggX 3457532-3458107 - 191 114564039 - Sfri_2875 - - YceI family protein 3484483-3486849 + 788 114564062 - Sfri_2898 - - Phosphoketolase 3487233-3488363 + 376 114564063 - Sfri_2899 - - OmpA/MotB domain protein 3500001-3500450 + 149 114564074 - Sfri_2910 - - cytochrome c, class II 3507622-3507975 - 117 114564081 - Sfri_2917 - - ribosomal protein L19 3509323-3509574 - 83 114564084 - Sfri_2920 - - ribosomal protein S16 3565984-3566676 + 230 114564130 - Sfri_2966 - - Adenosylhomocysteine nucleosidase 3573663-3574061 + 132 114564138 - Sfri_2974 - - hypothetical protein 3587054-3587320 + 88 114564149 - Sfri_2985 - - major outer membrane lipoprotein, putative 3593142-3593357 + 71 114564157 - Sfri_2993 - - ribosomal protein S21 3691675-3692061 - 128 114564245 - Sfri_3083 - - hypothetical protein 3695277-3695531 - 84 114564250 - Sfri_3088 - - ribosomal protein L27 3695548-3695859 - 103 114564251 - Sfri_3089 - - ribosomal protein L21 3698716-3699042 + 108 114564255 - Sfri_3093 - - hypothetical protein 3700647-3703202 - 851 114564258 - Sfri_3096 - - TonB-dependent receptor 3737317-3738066 - 249 114564285 - Sfri_3123 - - hypothetical protein 3756977-3758557 + 526 114564301 - Sfri_3139 - - isocitrate lyase and phosphorylmutase 3770722-3771111 - 129 114564311 - Sfri_3150 - - glycine cleavage system H protein 3800557-3801492 - 311 114564334 - Sfri_3173 - - malate dehydrogenase, NAD-dependent 3875779-3876531 - 250 114564399 - Sfri_3238 - - peptidylprolyl isomerase, FKBP-type 3886313-3886534 + 73 114564409 - Sfri_3248 - - hypothetical protein 3908061-3908750 + 229 114564427 - Sfri_3266 - - phage shock protein A, PspA 3936621-3937256 + 211 114564453 - Sfri_3292 - - transcriptional regulator, Crp/Fnr family protein 3943279-3944496 - 405 114564460 - Sfri_3299 - - acetylornithine and succinylornithine aminotransferases 3949832-3950461 - 209 114564465 - Sfri_3304 - - Glutathione S-transferase, N-terminal domain protein 3950557-3951291 - 244 114564466 - Sfri_3305 - - cytochrome c1 3956912-3957169 - 85 114564472 - Sfri_3311 - - RNA chaperone Hfq 3972589-3972780 + 63 114564485 - Sfri_3324 - - BFD domain protein (2Fe-2S)-binding domain protein 3981377-3982672 + 431 114564493 - Sfri_3332 - - type I secretion outer membrane protein, TolC family protein 3991917-3992384 + 155 114564505 - Sfri_3344 - - CheC domain protein 3998364-3998816 - 150 114564509 - Sfri_3348 - - ribosomal protein L9 3999411-3999803 - 130 114564512 - Sfri_3351 - - ribosomal protein S6 4008439-4008831 - 130 114564520 - Sfri_3359 - - ribosomal protein S9 4008849-4009277 - 142 114564521 - Sfri_3360 - - ribosomal protein L13 4052300-4053058 - 252 114564564 - Sfri_3403 - - uridine phosphorylase 4107415-4107771 + 118 114564610 - Sfri_3454 - - hypothetical protein 4202007-4202279 + 90 114564684 - Sfri_3532 - - histone family protein DNA-binding protein 4223195-4223524 + 109 114564706 - Sfri_3554 - - cytochrome c family protein 4230824-4231747 + 307 114564713 - Sfri_3561 - - DHHA2 domain protein 4253596-4256430 - 944 114564733 - Sfri_3581 - - putative lipoprotein 4265508-4265684 - 58 114564742 - Sfri_3590 - - hypothetical protein 4271344-4271766 + 140 114564749 - Sfri_3597 - - OsmC family protein 4339965-4341602 - 545 114564812 - Sfri_3660 - - chaperonin GroEL 4379265-4381016 + 583 114564842 - Sfri_3690 - - flavocytochrome c 4406509-4408413 + 634 114564866 - Sfri_3714 - - DEAD/DEAH box helicase domain protein 4451358-4451879 - 173 114564896 - Sfri_3744 - - methylation site containing protein 4466787-4466999 - 70 114564910 - Sfri_3758 - - ribosomal protein L31 4480959-4483556 - 865 114564923 - Sfri_3771 - - Aconitate hydratase 4492187-4493617 - 476 114564927 - Sfri_3775 - - dihydrolipoamide dehydrogenase 4495826-4498492 - 888 114564929 - Sfri_3777 - - 2-oxo-acid dehydrogenase E1 subunit, homodimeric type 4564933-4565106 - 57 114564976 - Sfri_3826 - - ribosomal protein L33 4565113-4565349 - 78 114564977 - Sfri_3827 - - ribosomal protein L28 4574888-4575601 - 237 114564986 - Sfri_3836 - - ribonuclease PH 4707835-4708458 + 207 114565095 - Sfri_3945 - - cytochrome c, class I 4767934-4768128 - 64 114565149 - Sfri_3999 - - hypothetical protein 4791453-4791926 - 157 114565169 - Sfri_4019 - - protein-export protein SecB 4811959-4813134 - 391 114565185 - Sfri_4035 - - phosphate-selective porin O and P 4817885-4819714 - 609 114565190 - Sfri_4040 - - glucosamine--fructose-6-phosphate aminotransferase, isomerizing 4824585-4825013 - 142 114565194 - Sfri_4044 - - ATP synthase F1, epsilon subunit