Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome - 1..4791961


Location	Strand	Length	PID		Gene	Synonym	Code	COG	Product

190-255	+	21	29140544	thrL	t0001	-	-	thr operon leader peptide 
7665-8618	+	317	29140550	talB	t0007	-	-	transaldolase 
11594-13510	+	638	29140555	dnaK	t0012	-	COG0443O	molecular chaperone DnaK 
17873-19972	+	699	29140561	-	t0018	-	COG3979R	putative chitinase 
64859-66634	-	591	29140599	oadA	t0057	-	COG1038C,COG5016C	oxaloacetate decarboxylase 
76851-80078	+	1075	29140610	carB	t0068	-	COG0458EF	carbamoyl-phosphate synthase large subunit 
157089-158240	+	383	29140678	ftsZ	t0137	-	COG0206D	cell division protein FtsZ 
160098-162803	+	901	29140681	secA	t0140	-	COG0653U	translocase 
179378-182041	+	887	29140699	aceE	t0158	-	COG2609C	pyruvate dehydrogenase E1 component 
182056-183945	+	629	29140700	aceF	t0159	-	COG0508C	dihydrolipoamide acetyltransferase 
184144-185571	+	475	29140701	lpdA	t0160	-	COG1249C	dihydrolipoamide dehydrogenase 
188997-191594	+	865	29140705	acnB	t0164	-	COG1049C	aconitate hydratase 
207896-208276	-	126	29140722	panD	t0181	-	-	aspartate 1-decarboxylase precursor 
234210-235490	-	426	29140743	hemL	t0203	-	COG0001H	glutamate-1-semialdehyde aminotransferase 
246289-247113	-	274	29140753	dapD	t0214	-	COG2171E	2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 
249928-250722	-	264	29140755	map	t0216	-	COG0024J	methionine aminopeptidase 
251172-251897	+	241	29140756	rpsB	t0217	-	-	30S ribosomal protein S2 
252155-253006	+	283	29140757	tsf	t0218	-	-	elongation factor Ts 
253151-253876	+	241	29140758	pyrH	t0219	-	COG0528F	uridylate kinase 
280756-282474	-	572	29140783	proS	t0245	-	COG0442J	prolyl-tRNA synthetase 
283812-284627	-	271	29140786	yaeC	t0248	-	COG1464P	putative lipoprotein precursor 
302960-303343	+	127	29140799	yfiD	t0264	-	COG3445R	hypothetical protein 
336765-337103	+	112	29140829	glnB	t0295	-	COG0347E	nitrogen regulatory protein p-II 
345815-347068	+	417	29140835	glyA	t0301	-	COG0112E	serine hydroxymethyltransferase 
355499-356302	-	267	29140843	suhB	t0310	-	COG0483G	extragenic suppressor protein SuhB 
358069-359283	+	404	29140846	-	t0313	-	COG1104E	cysteine desulfurase 
359311-359697	+	128	29140847	nifU	t0314	-	COG0822C	NifU-like protein 
414059-415531	+	490	29140875	guaB	t0346	-	COG0516F,COG0517R	inositol-5-monophosphate dehydrogenase 
415601-417178	+	525	29140876	guaA	t0347	-	COG0518F,COG0519F	bifunctional GMP synthase/glutamine amidotransferase protein 
496725-497234	-	169	29140951	crr	t0424	-	-	glucose-specific PTS system enzyme IIA component 
499051-499308	-	85	29140953	ptsH	t0426	-	COG1925G	phosphocarrier protein HPr 
512524-513939	+	471	29140965	gltX	t0442	-	COG0008J	glutamyl-tRNA synthetase 
559857-561071	+	404	29141001	fabB	t0486	-	COG0304IQ	3-oxoacyl-(acyl carrier protein) synthase 
598328-600472	-	714	29141041	pta	t0526	-	COG0280C,COG0857R	phosphate acetyltransferase 
600549-601751	-	400	29141042	ackA	t0527	-	COG0282C	acetate/propionate kinase 
613699-615036	+	445	29141055	nuoF	t0540	-	COG1894C	NADH dehydrogenase I chain F 
615061-617793	+	910	29141056	nuoG	t0541	-	COG1034C	NADH dehydrogenase gamma subunit 
624056-625333	+	425	29141063	nuoN	t0548	-	COG1007C	NADH dehydrogenase subunit N 
632265-633122	+	285	29141071	menB	t0556	-	COG0447H	naphthoate synthase 
663367-665652	-	761	29141102	nrdA	t0587	-	COG0209F	ribonucleotide-diphosphate reductase alpha subunit 
670704-673340	+	878	29141106	gyrA	t0592	-	COG0188L	DNA gyrase subunit A 
681183-682319	+	378	29141111	ompC	t0597	-	COG3203M	outer membrane protein C 
694714-695373	+	219	29141125	ccmB	t0611	-	COG2386O	heme exporter protein B1 
711610-711894	-	94	29141140	rplY	t0630	-	COG1825J	50S ribosomal protein L25 
786583-788616	-	677	29141207	metG	t0701	-	COG0073R,COG0143J	methionyl-tRNA synthetase 
913171-913506	+	111	29141313	-	t0815	-	-	hypothetical protein 
927729-929393	-	554	29141331	pduC	t0834	-	-	glycerol dehydratase large subunit 
929412-930113	-	233	29141332	pduB	t0835	-	-	putative propanediol utilization protein PduB 
984125-985309	-	394	29141371	ompS	t0883	-	COG3203M	outer membrane protein S1 
1064639-1066411	+	590	29141457	aspS	t0976	-	COG0173J	aspartyl-tRNA synthetase 
1066996-1067736	+	246	29141459	yebC	t0978	-	-	hypothetical protein 
1123771-1123980	+	69	29141516	cspC	t1041	-	-	cold shock-like protein CspC 
1129174-1129974	-	266	29141522	manY	t1047	-	-	phosphotransferase enzyme II, C component 
1180822-1181769	-	315	29141568	prsA	t1096	-	COG0462FE	ribose-phosphate pyrophosphokinase 
1188269-1189123	+	284	29141576	kdsA	t1104	-	COG2877M	2-dehydro-3-deoxyphosphooctonate aldolase 
1236572-1237567	-	331	29141635	gapA	t1169	-	COG0057G	glyceraldehyde-3-phosphate dehydrogenase 
1283215-1283412	+	65	29141679	rpmI	t1215	-	COG0291J	50S ribosomal protein L35 
1283463-1283819	+	118	29141680	rplT	t1216	-	-	50S ribosomal protein L20 
1283940-1283984	+	14	29141681	pheM	t1217	-	-	phenylalanyl-tRNA synthetase operon leader peptide 
1314060-1314296	-	78	29141708	lppA	t1245	-	-	major outer membrane lipoprotein 
1314607-1316019	-	470	29141709	pykF	t1246	-	-	pyruvate kinase 
1403668-1404819	-	383	29141798	-	t1341	-	COG3203M	outer membrane protein 
1430820-1431131	-	103	29141829	-	t1375	-	-	hypothetical protein 
1718612-1721290	+	892	29142095	adh	t1660	-	COG1012C,COG1454C	alcohol dehydrogenase 
1731824-1733359	-	511	29142106	narH	t1672	-	COG1140C	respiratory nitrate reductase 1 beta chain 
1783717-1785150	-	477	29142150	ptsG	t1717	-	COG1263G	glucose-specific IIBC component of PTS system 
1791164-1791400	-	78	29142157	acpP	t1724	-	COG0236IQ	acyl carrier protein 
1795494-1795667	-	57	29142162	rpmF	t1729	-	COG0333J	50S ribosomal protein L32 
1909758-1910810	+	350	29142277	ompA	t1850	-	COG2885M	outer membrane protein A 
1979688-1980779	+	363	29142359	ompF	t1935	-	COG3203M	outer membrane protein F precursor 
2003102-2004775	-	557	29142376	rpsA	t1953	-	COG0539J	30S ribosomal protein S1 
2013188-2015470	+	760	29142384	pflB	t1961	-	COG1882C	formate acetyltransferase 1 
2054762-2056414	+	550	29142417	-	t1996	-	-	hydroxylamine reductase 
2117228-2117743	-	171	29142476	ompX	t2055	-	COG3637M	outer membrane protein X 
2126553-2126813	+	86	29142485	ybiJ	t2065	-	-	hypothetical protein 
2179378-2180130	+	250	29142530	gpmA	t2115	-	COG0588G	phosphoglyceromutase 
2188580-2189104	-	174	29142539	pal	t2127	-	COG2885M	peptidoglycan-associated lipoprotein precursor 
2198361-2199230	-	289	29142549	sucD	t2137	-	COG0074C	succinyl-CoA synthetase alpha subunit 
2199230-2200396	-	388	29142550	sucC	t2138	-	COG0045C	succinyl-CoA synthetase subunit beta 
2200538-2201746	-	402	29142551	sucB	t2139	-	COG0508C	dihydrolipoamide acetyltransferase 
2205821-2207587	-	588	29142554	sdhA	t2142	-	COG1053C	succinate dehydrogenase catalytic subunit 
2254145-2255551	-	468	29142596	ybfM	t2188	-	-	putative outer membrane protein 
2256003-2257670	-	555	29142597	glnS	t2189	-	COG0008J	glutaminyl-tRNA synthetase 
2257881-2259833	-	650	29142598	nagE	t2190	-	COG1263G	N-acetylglucosamine-specific IIABC component of PTS system 
2284615-2287197	+	860	29142620	leuS	t2219	-	COG0495J	leucyl-tRNA synthetase 
2310948-2312477	+	509	29142646	citF	t2246	-	COG3051C	citrate lyase alpha chain 
2325972-2326535	-	187	29142660	ahpC	t2260	-	COG0450O	alkyl hydroperoxide reductase c22 protein 
2388932-2389426	+	164	29142717	ppiB	t2325	-	COG0652O	peptidyl-prolyl cis-trans isomerase B 
2441391-2442035	-	214	29142761	adk	t2372	-	COG0563F	adenylate kinase 
2442451-2444349	-	632	29142762	htpG	t2373	-	COG0326O	heat shock protein 90 
2445041-2445370	-	109	29142764	ybaB	t2375	-	COG0718S	hypothetical protein 
2483597-2484868	-	423	29142799	clpX	t2411	-	COG1219O	ATP-dependent protease ATP-binding subunit 
2485990-2487288	-	432	29142801	tig	t2413	-	COG0544O	trigger factor 
2493754-2494368	+	204	29142807	cyoC	t2419	-	COG1845C	cytochrome o ubiquinol oxidase subunit III 
2520492-2521355	+	287	29142838	tsx	t2450	-	COG3248M	nucleoside-specific channel-forming protein tsx precursor 
2526592-2526924	-	110	29142845	yajC	t2457	-	COG1862U	preprotein translocase subunit YajC 
2530220-2530822	+	200	29142849	-	t2461	-	COG0450O	probable peroxidase 
2664315-2664800	-	161	29142960	-	t2584	-	-	hypothetical protein 
2705977-2706324	-	115	29142997	rplS	t2628	-	-	50S ribosomal protein L19 
2707744-2707992	-	82	29143000	rpsP	t2631	-	-	30S ribosomal protein S16 
2813610-2814671	-	353	29143089	recA	t2730	-	COG0468L	recombinase A 
2832089-2832631	-	180	29143109	hycF	t2750	-	COG1143C	hydrogenase 4 Fe-S subunit 
2832641-2834350	-	569	29143110	hycE	t2751	-	COG3261C,COG3262C	formate hydrogenlyase subunit 5 
2930210-2931508	-	432	29143208	eno	t2853	-	COG0148G	phosphopyruvate hydratase 
2962204-2963493	+	429	29143232	sdaC	t2878	-	COG0814E	putative serine transporter 
3047236-3048753	-	505	29143308	lysS	t2958	-	COG1190J	lysyl-tRNA synthetase 
3063190-3063582	-	130	29143322	gcvH	t2972	-	COG0509E	glycine cleavage system protein H 
3078242-3079321	-	359	29143337	fba	t2987	-	COG0191G	fructose-bisphosphate aldolase 
3079423-3080586	-	387	29143338	pgk	t2988	-	-	phosphoglycerate kinase 
3085832-3087823	-	663	29143346	tktA	t2996	-	COG0021G	transketolase 
3088958-3089878	-	306	29143348	speB	t2998	-	COG0010E	agmatinase 
3092872-3094026	+	384	29143352	metK	t3002	-	COG0192H	S-adenosylmethionine synthetase 
3183252-3183644	-	130	29143439	-	t3097	-	-	possible exported protein 
3217050-3217265	+	71	29143470	rpsU	t3129	-	COG0828J	30S ribosomal protein S21 
3287491-3289431	-	646	29143534	-	t3198	-	COG0513LKJ	ATP-dependent RNA helicase 
3290553-3292688	-	711	29143536	pnp	t3200	-	COG1185J	polynucleotide phosphorylase 
3292930-3293199	-	89	29143537	rpsO	t3201	-	-	30S ribosomal protein S15 
3294294-3294695	-	133	29143539	rbfA	t3203	-	COG0858J	ribosome-binding factor A 
3294916-3297594	-	892	29143540	infB	t3204	-	COG0532J	translation initiation factor IF-2 
3297619-3299121	-	500	29143541	nusA	t3205	-	COG0195K	transcription elongation factor NusA 
3304708-3306642	-	644	29143547	ftsH	t3213	-	COG0465O	cell division protein 
3310236-3311408	-	390	29143552	-	t3218	-	COG0536R	probable GTP-binding protein 
3312519-3312776	-	85	29143554	rpmA	t3220	-	-	50S ribosomal protein L27 
3312796-3313107	-	103	29143555	rplU	t3221	-	-	50S ribosomal protein L21 
3323133-3323651	+	172	29143569	-	t3235	-	COG1934S	hypothetical protein 
3351511-3351903	-	130	29143593	rpsI	t3260	-	-	30S ribosomal protein S9 
3351919-3352347	-	142	29143594	rplM	t3261	-	-	50S ribosomal protein L13 
3359150-3360925	-	591	29143600	oadA	t3267	-	COG1038C,COG5016C	oxaloacetate decarboxylase 
3382612-3383655	-	347	29143622	mreB	t3289	-	COG1077D	rod shape-determining protein 
3389673-3391022	+	449	29143628	accC	t3295	-	COG0439I	acetyl-CoA carboxylase 
3455762-3456082	+	106	29143680	cyaY	t3354	-	-	frataxin-like protein 
3480444-3481703	-	419	29143702	rho	t3380	-	COG1158K	transcription termination factor Rho 
3490391-3491866	-	491	29143711	ilvC	t3389	-	COG0059EH	ketol-acid reductoisomerase 
3516382-3517440	+	352	29143740	-	t3419	-	-	major capsid protein 
3544138-3545727	+	529	29143769	purH	t3455	-	-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 
3545743-3547032	+	429	29143770	purD	t3456	-	COG0151F	phosphoribosylamine--glycine ligase 
3551212-3551484	-	90	29143775	hupA	t3461	-	-	histone like DNA-binding protein HU-alpha 
3562636-3566859	-	1407	29143787	rpoC	t3473	-	COG0086K	DNA-directed RNA polymerase beta' subunit 
3566936-3570964	-	1342	29143788	rpoB	t3474	-	COG0085K	DNA-directed RNA polymerase beta subunit 
3571282-3571647	-	121	29143789	rplL	t3475	-	COG0222J	50S ribosomal protein L7/L12 
3571714-3572211	-	165	29143790	rplJ	t3476	-	COG0244J	50S ribosomal protein L10 
3572627-3573331	-	234	29143791	rplA	t3477	-	-	50S ribosomal protein L1 
3573335-3573763	-	142	29143792	rplK	t3478	-	-	50S ribosomal protein L11 
3573921-3574466	-	181	29143793	nusG	t3479	-	COG0250K	transcription antitermination protein NusG 
3575081-3576265	-	394	29143795	tuf	t3481	-	COG0050J	elongation factor Tu 
3625098-3625310	-	70	29143827	rpmE	t3522	-	COG0254J	50S ribosomal protein L31 
3630613-3631944	+	443	29143832	hslU	t3527	-	COG1220O	ATP-dependent protease ATP-binding subunit 
3640059-3640826	+	255	29143842	tpiA	t3537	-	COG0149G	triosephosphate isomerase 
3657807-3658769	-	320	29143860	pfkA	t3557	-	COG0205G	6-phosphofructokinase 
3663934-3664554	-	206	29143867	sodA	t3564	-	COG0605P	manganese superoxide dismutase 
3676049-3677197	+	382	29143876	-	t3575	-	COG1454C	alcohol dehydrogenase 
3686254-3687156	+	300	29143885	fdoH	t3584	-	COG0437C	formate dehydrogenase-O beta subunit 
3711782-3713605	-	607	29143912	typA	t3613	-	COG1217T	GTP-binding protein 
3713981-3715390	+	469	29143913	glnA	t3614	-	-	glutamine synthetase 
3739217-3740107	-	296	29143930	rbsB	t3635	-	COG1879G	D-ribose-binding periplasmic protein 
3755407-3755646	+	79	29143944	atpE	t3649	-	COG0636C	ATP synthase subunit C 
3756737-3758278	+	513	29143947	atpA	t3652	-	COG0056C	ATP synthase subunit A 
3759219-3760601	+	460	29143949	atpD	t3654	-	COG0055C	ATP synthase subunit B 
3763847-3765676	+	609	29143953	glmS	t3658	-	COG0449M	D-fructose-6-phosphate amidotransferase 
3775334-3776374	+	346	29143960	pstS	t3666	-	COG0226P	periplasmic phosphate-binding protein 
3779234-3779959	+	241	29143964	phoU	t3670	-	COG0704P	phosphate transport system regulatory protein 
3787571-3789217	-	548	29143972	yidC	t3678	-	COG0706U	inner membrane protein translocase component YidC 
3789817-3789957	-	46	29143974	rpmH	t3680	-	COG0230J	50S ribosomal protein L34 
3794423-3796837	+	804	29143978	gyrB	t3684	-	COG0187L	DNA gyrase subunit B 
3816239-3816898	+	219	29143993	ccmB	t3700	-	COG2386O	heme exporter protein B2 
3911334-3911570	+	78	29144070	rpmB	t3790	-	COG0227J	50S ribosomal protein L28 
3911591-3911758	+	55	29144071	rpmG	t3791	-	COG0267J	50S ribosomal protein L33 
3928387-3929319	-	310	29144089	rfaD	t3809	-	COG0451MG	ADP-L-Glycero-D-mannoheptose-6-epimerase 
3930728-3931753	+	341	29144091	tdh	t3811	-	COG1063ER	L-threonine 3-dehydrogenase 
3935528-3937051	-	507	29144095	-	t3815	-	COG0696G	phosphoglyceromutase 
3956413-3958329	-	638	29144113	mtlA	t3834	-	COG2213G,COG4668G	mannitol-specific enzyme II of phosphotransferase system 
3991752-3993821	+	689	29144141	glyS	t3864	-	COG0751J	glycyl-tRNA synthetase beta subunit 
3997272-3997484	-	70	29144146	cspA	t3870	-	-	cold shock protein 
4054874-4056226	-	450	29144189	gor	t3918	-	COG1249C	glutathione reductase 
4063524-4063958	-	144	29144196	uspA	t3925	-	COG0589T	universal stress protein A 
4118530-4119063	+	177	29144247	gntK	t3980	-	COG3265G	putative gluconokinase 
4188137-4190680	-	847	29144298	nirB	t4031	-	COG1251C	nitrite reductase large subunit 
4207246-4207836	+	196	29144315	slyD	t4050	-	COG1047O	FKBP-type peptidyl-prolyl cis-trans isomerase 
4211441-4211815	+	124	29144322	rpsL	t4057	-	-	30S ribosomal protein S12 
4211911-4212381	+	156	29144323	rpsG	t4058	-	COG0049J	30S ribosomal protein S7 
4212478-4214592	+	704	29144324	fusA	t4059	-	COG0480J	elongation factor EF-2 
4214664-4215848	+	394	29144325	tuf	t4060	-	COG0050J	elongation factor Tu 
4217620-4217931	+	103	29144329	rpsJ	t4064	-	COG0051J	30S ribosomal protein S10 
4217964-4218593	+	209	29144330	rplC	t4065	-	-	50S ribosomal protein L3 
4218604-4219209	+	201	29144331	rplD	t4066	-	-	50S ribosomal protein L4 
4219206-4219508	+	100	29144332	rplW	t4067	-	COG0089J	50S ribosomal protein L23 
4219526-4220347	+	273	29144333	rplB	t4068	-	COG0090J	50S ribosomal protein L2 
4220657-4220989	+	110	29144335	rplV	t4070	-	-	50S ribosomal protein L22 
4221007-4221708	+	233	29144336	rpsC	t4071	-	COG0092J	30S ribosomal protein S3 
4222322-4222576	+	84	29144339	rpsQ	t4074	-	COG0186J	30S ribosomal protein S17 
4223122-4223436	+	104	29144341	rplX	t4076	-	COG0198J	50S ribosomal protein L24 
4224344-4224736	+	130	29144344	rpsH	t4079	-	-	30S ribosomal protein S8 
4225292-4225645	+	117	29144346	rplR	t4081	-	COG0256J	50S ribosomal protein L18 
4225660-4226163	+	167	29144347	rpsE	t4082	-	COG0098J	30S ribosomal protein S5 
4226350-4226784	+	144	29144349	rplO	t4084	-	COG0200J	50S ribosomal protein L15 
4255379-4259062	+	1227	29144377	metH	t4115	-	COG0646E,COG1410E	B12-dependent methionine synthase 
4269936-4271585	+	549	29144389	pgi	t4127	-	COG0166G	glucose-6-phosphate isomerase 
4291262-4291474	+	70	29144408	-	t4146	-	COG3237S	hypothetical protein 
4359935-4360270	-	111	29144458	phnA	t4196	-	COG2824P	hypothetical protein 
4474736-4475800	-	354	29144572	-	t4319	-	-	putative major capsid protein 
4530341-4531777	-	478	29144626	aspA	t4377	-	COG1027E	aspartate ammonia-lyase 
4534170-4534463	+	97	29144630	groES	t4381	-	COG0234O	co-chaperonin GroES 
4534507-4536153	+	548	29144631	groEL	t4382	-	COG0459O	chaperonin GroEL 
4539006-4539572	+	188	29144635	efp	t4386	-	COG0231J	elongation factor P 
4543377-4545167	-	596	29144644	frdA	t4395	-	COG1053C	fumarate reductase 
4566963-4567967	+	334	29144662	hflC	t4415	-	COG0330O	HflC protein 
4568346-4569644	+	432	29144664	purA	t4417	-	-	adenylosuccinate synthetase 
4585884-4586534	+	216	29144682	sgaH	t4437	-	COG0269G	putative hexulose-6-phosphate synthase 
4588960-4589355	+	131	29144687	rpsF	t4442	-	COG0360J	30S ribosomal protein S6 
4589681-4589908	+	75	29144689	rpsR	t4444	-	-	30S ribosomal protein S18 
4589950-4590399	+	149	29144690	rplI	t4445	-	COG0359J	50S ribosomal protein L9 
4616736-4617266	-	176	29144713	ppa	t4468	-	COG0221C	inorganic pyrophosphatase 
4642000-4642386	-	128	29144738	yjgF	t4493	-	COG0251J	hypothetical protein 
4655990-4658845	-	951	29144755	valS	t4510	-	COG0525J	valyl-tRNA synthetase