Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete sequence - 0..1072315 Location Strand Length PID Gene Synonym Code COG Product 4811-5530 + 239 15600777 - VCA0006 - - hypothetical protein 19781-20299 + 172 15600788 - VCA0017 - - hcp protein 61320-62057 - 245 15600824 - VCA0053 - COG0813F purine nucleoside phosphorylase 79395-80294 + 299 15600841 - VCA0070 - COG0226P phosphate ABC transporter, periplasmic phosphate-binding protein 117393-118871 + 492 15600879 - VCA0108 - - hypothetical protein 144693-145577 + 294 15600901 - VCA0130 - COG1879G ribose ABC transporter, periplasmic D-ribose-binding protein 184257-184469 + 70 15600936 - VCA0166 - - cold shock transcriptional regulator CspA 203449-203658 - 69 15600954 - VCA0184 - - cold shock DNA-binding domain protein 282297-282677 + 126 15601033 - VCA0265 - - hypothetical protein 295889-296269 - 126 15601044 - VCA0277 - COG0509E glycine cleavage system protein H 306492-308420 + 642 15601053 - VCA0287 - COG0441J threonyl-tRNA synthetase 309079-309273 + 64 15601054 rpmI VCA0289 - COG0291J 50S ribosomal protein L35 309315-309668 + 117 15601055 - VCA0290 - - 50S ribosomal protein L20 557117-558067 + 316 15601381 - VCA0623 - - transaldolase 558116-560158 + 680 15601382 - VCA0624 - COG0021G transketolase 586449-586886 + 145 15601410 - VCA0652 - - hypothetical protein 649740-651119 + 459 15601463 - VCA0707 - COG2271G regulatory protein UhpC, putative 678403-678801 + 132 15601488 - VCA0732 - - hypothetical protein 687029-687349 + 106 15601497 - VCA0741 - - hypothetical protein 746491-748482 - 663 15601559 - VCA0804 - COG0513LKJ ATP-dependent RNA helicase DeaD 760423-761352 - 309 15601569 - VCA0814 - COG0010E agmatinase 838926-840119 - 397 15601641 - VCA0886 - COG0156H 2-amino-3-ketobutyrate coenzyme A ligase 852453-853901 + 482 15601652 - VCA0898 - COG0362G 6-phosphogluconate dehydrogenase 886068-886280 + 70 15601687 - VCA0933 - - cold shock domain family protein 896008-897228 - 406 15601698 malE VCA0945 - COG2182G periplasmic maltose-binding protein 959181-960176 + 331 15601761 - VCA1008 - COG3203M outer membrane protein, putative 972427-973227 + 266 15601778 - VCA1025 - COG0363G glucosamine-6-phosphate deaminase 4492-4629 - 45 15640039 - VC0007 - - 50S ribosomal protein L34 11103-13520 + 805 15640047 - VC0015 - COG0187L DNA gyrase subunit B 14769-15206 + 145 15640050 - VC0018 - COG0071O 16 kDa heat shock protein A 16869-18935 - 688 15640052 glyS VC0020 - COG0751J glycyl-tRNA synthetase beta subunit 189457-190821 - 454 15640216 - VC0186 - COG1249C glutathione reductase 226229-226465 + 78 15640248 - VC0218 - COG0227J ribosomal protein L28 226479-226646 + 55 15640249 rpmG VC0219 - COG0267J 50S ribosomal protein L33 278432-278704 + 90 15640302 - VC0273 - - DNA-binding protein HU 279539-280828 - 429 15640304 - VC0275 - COG0151F phosphoribosylamine--glycine ligase 299889-300185 - 98 15640318 - VC0290 - COG2901KL DNA-binding protein Fis 302413-303756 - 447 15640323 - VC0295 - COG0439I acetyl-CoA carboxylase 317772-318098 + 108 15640334 - VC0306 - COG0526OC thioredoxin 318296-319555 + 419 15640335 rho VC0307 - COG1158K transcription termination factor Rho 335326-336510 + 394 15640348 tuf VC0321 - COG0050J elongation factor Tu 337809-338237 + 142 15640351 rplK VC0324 - - 50S ribosomal protein L11 338242-338943 + 233 15640352 - VC0325 - - 50S ribosomal protein L1 339213-339701 + 162 15640353 rplJ VC0326 - COG0244J 50S ribosomal protein L10 339768-340133 + 121 15640354 - VC0327 - COG0222J 50S ribosomal protein L7/L12 340272-344399 + 1375 15640355 - VC0328 - COG0085K DNA-directed RNA polymerase beta subunit 344504-348709 + 1401 15640356 - VC0329 - COG0086K DNA-directed RNA polymerase beta' subunit 354684-356216 - 510 15640363 - VC0336 - COG0696G phosphoglyceromutase 370149-370412 + 87 15640374 - VC0347 - COG1923R RNA-binding protein Hfq 375590-376369 + 259 15640381 - VC0354 - COG0545O peptidyl-prolyl cis-trans isomerase, FKBP-type 378505-378879 + 124 15640386 - VC0359 - - 30S ribosomal protein S12 378995-379465 + 156 15640387 - VC0360 - COG0049J 30S ribosomal protein S7 379541-381637 + 698 15640388 - VC0361 - COG0480J elongation factor EF-2 381760-382944 + 394 15640389 tuf VC0362 - COG0050J elongation factor Tu 384193-384561 + 122 15640393 rpsF VC0366 - COG0360J 30S ribosomal protein S6 384887-385114 + 75 15640395 rpsR VC0368 - - 30S ribosomal protein S18 385148-385597 + 149 15640396 - VC0369 - COG0359J 50S ribosomal protein L9 389886-391538 + 550 15640401 - VC0374 - COG0166G glucose-6-phosphate isomerase 420633-421508 - 291 15640422 - VC0395 - COG1210M UTP--glucose-1-phosphate uridylyltransferase 454890-455312 + 140 15640451 - VC0424 - COG3076S hypothetical protein 460153-461139 - 328 15640457 - VC0430 - COG2358R immunogenic protein 466449-466760 + 103 15640462 - VC0435 - - 50S ribosomal protein L21 466781-467041 + 86 15640463 - VC0436 - - 50S ribosomal protein L27 467249-468436 + 395 15640464 - VC0437 - COG0536R GTP1/Obg family protein 500170-501327 - 385 15640499 - VC0472 - COG0192H S-adenosylmethionine synthetase 501605-503689 + 694 15640500 - VC0473 - COG0021G transketolase 508071-509249 + 392 15640504 - VC0477 - - phosphoglycerate kinase 509405-510481 + 358 15640505 - VC0478 - COG0191G fructose-bisphosphate aldolase 514732-516144 - 470 15640512 - VC0485 - - pyruvate kinase 554708-554923 - 71 15640543 - VC0520 - COG0828J 30S ribosomal protein S21 576524-579106 + 860 15640567 - VC0545 - COG0013J alanyl-tRNA synthetase 580589-580786 + 65 15640570 - VC0548 - - carbon storage regulator 596286-596534 + 82 15640583 - VC0561 - - 30S ribosomal protein S16 597929-598282 + 117 15640586 - VC0564 - - 50S ribosomal protein L19 603055-603483 + 142 15640592 - VC0570 - - 50S ribosomal protein L13 603499-603891 + 130 15640593 - VC0571 - - 30S ribosomal protein S9 644349-646754 - 801 15640632 - VC0612 - COG3459G cellobiose/cellodextrin-phosphorylase, putative 655653-657323 - 556 15640640 - VC0620 - COG0747E peptide ABC transporter, periplasmic peptide-binding protein 674828-675880 - 350 15640653 - VC0633 - COG3203M outer membrane protein OmpU 683825-685312 + 495 15640662 - VC0642 - COG0195K transcription elongation factor NusA 685337-688033 + 898 15640663 infB VC0643 - COG0532J translation initiation factor IF-2 689613-689882 + 89 15640666 - VC0646 - - 30S ribosomal protein S15 690245-692374 + 709 15640667 - VC0647 - COG1185J polyribonucleotide nucleotidyltransferase 710583-712121 + 512 15640683 lysS VC0664 - COG1190J lysyl-tRNA synthetase 725539-725799 - 86 15640698 rpsT VC0679 - COG0268J 30S ribosomal protein S20 728687-731536 + 949 15640701 - VC0682 - COG0060J isoleucyl-tRNA synthetase 733798-735282 - 494 15640706 - VC0687 - COG1966T carbon starvation protein A, putative 746356-748023 - 555 15640717 - VC0698 - COG0488R ABC transporter, ATP-binding protein 769565-770965 - 466 15640736 - VC0717 - - protease, putative 786666-787289 - 207 15640750 - VC0731 - COG0450O antioxidant, AhpC/Tsa family 790749-792062 + 437 15640755 - VC0736 - COG2224C isocitrate lyase 794241-795380 + 379 15640760 - VC0741 - COG0343J queuine tRNA-ribosyltransferase 795485-795817 + 110 15640761 yajC VC0742 - COG1862U preprotein translocase subunit YajC 798822-799688 - 288 15640764 - VC0745 - COG0483G inositol monophosphate family protein 801201-802415 + 404 15640767 - VC0748 - COG1104E cysteine desulfurase 802452-802835 + 127 15640768 - VC0749 - COG0822C NifU-related protein 820012-821481 + 489 15640786 - VC0767 - COG0516F,COG0517R inositol-5-monophosphate dehydrogenase 825292-825885 + 197 15640789 - VC0770 - COG1584S hypothetical protein 919557-920159 + 200 15640870 - VC0854 - COG0576O heat shock protein GrpE 920423-922330 + 635 15640871 dnaK VC0855 - COG0443O molecular chaperone DnaK 937854-939569 - 571 15640891 - VC0875 - COG0442J prolyl-tRNA synthetase 940625-940882 + 85 15640894 - VC0878 - COG0254J 50S ribosomal protein L31 965193-966020 - 275 15640921 - VC0905 - COG1464P lipoprotein YaeC 1006823-1008130 + 435 15640957 - VC0941 - COG0112E serine hydroxymethyltransferase 1018821-1021505 - 894 15640972 leuS VC0956 - COG0495J leucyl-tRNA synthetase 1029142-1029651 - 169 15640980 - VC0964 - - glucose-specific PTS system enzyme IIA component 1029760-1031481 - 573 15640981 - VC0965 - COG1080G phosphoenolpyruvate-protein phosphotransferase 1031615-1031872 - 85 15640982 - VC0966 - COG1925G phosphocarrier protein HPr 1037891-1038940 + 349 15640988 - VC0972 - COG3203M porin, putative 1050494-1051138 + 214 15641001 adk VC0986 - COG0563F adenylate kinase 1061324-1062895 + 523 15641010 - VC0995 - COG1263G PTS system, N-acetylglucosamine-specific IIABC component 1063143-1064813 + 556 15641012 - VC0997 - COG0008J glutaminyl-tRNA synthetase 1158668-1160299 + 543 15641104 - VC1091 - COG4166E oligopeptide ABC transporter, periplasmic oligopeptide-binding protein 1165467-1167611 - 714 15641110 - VC1097 - COG0857R,COG0280C phosphate acetyltransferase 1167747-1168943 - 398 15641111 - VC1098 - COG0282C acetate/propionate kinase 1179130-1180437 + 435 15641123 - VC1110 - COG0172J seryl-tRNA synthetase 1198167-1198580 - 137 15641143 - VC1130 - COG2916R DNA-binding protein H-NS 1209652-1211877 + 741 15641154 - VC1141 - - isocitrate dehydrogenase 1217246-1217524 - 92 15641159 - VC1146 - COG0695O glutaredoxin 1 1238124-1239899 + 591 15641179 - VC1166 - COG0173J aspartyl-tRNA synthetase 1283779-1284099 - 106 15641221 - VC1208 - - hypothetical protein 1284104-1284703 - 199 15641222 - VC1209 - COG0231J elongation factor P 1296440-1297423 + 327 15641232 pheS VC1219 - COG0016J phenylalanyl-tRNA synthetase alpha subunit 1297450-1299837 + 795 15641233 pheT VC1220 - COG0073R,COG0072J phenylalanyl-tRNA synthetase beta subunit 1326384-1328669 - 761 15641269 - VC1256 - COG0209F ribonucleotide-diphosphate reductase alpha subunit 1330207-1332891 + 894 15641271 - VC1258 - COG0188L DNA gyrase, subunit A 1375995-1377440 - 481 15641310 - VC1297 - COG0017J asparaginyl-tRNA synthetase 1380028-1381389 - 453 15641313 - VC1300 - COG1760E L-serine dehydratase 1 1381482-1382735 - 417 15641314 - VC1301 - COG0814E serine transporter 1476980-1477462 + 160 15641396 - VC1384 - - hypothetical protein 1509632-1510150 + 172 15641426 - VC1415 - - hcp protein 1608526-1609152 - 208 15641506 - VC1497 - COG3109T putative solute/DNA competence effector 1621375-1621857 + 160 15641517 - VC1508 - - hypothetical protein 1632888-1634480 - 530 15641528 - VC1520 - COG0488R ABC transporter, ATP-binding protein 1644190-1644465 + 91 15641539 - VC1531 - - hypothetical protein 1766460-1766738 + 92 15641645 - VC1640 - COG1825J 50S ribosomal protein L25 1874114-1875013 - 299 15641742 - VC1738 - COG3007S hypothetical protein 1961550-1962953 + 467 15641823 - VC1821 - COG1299G PTS system, fructose-specific IIBC component 1976570-1977088 - 172 15641837 - VC1835 - COG2885M peptidoglycan-associated lipoprotein 1988801-1989295 + 164 15641851 - VC1849 - COG0652O peptidyl-prolyl cis-trans isomerase B 2006867-2009230 + 787 15641868 - VC1866 - COG1882C formate acetyltransferase 2063813-2065483 - 556 15641917 - VC1915 - COG0539J 30S ribosomal protein S1 2068910-2069182 - 90 15641921 - VC1919 - - DNA-binding protein HU-beta 2071849-2073129 - 426 15641923 - VC1921 - COG1219O ATP-dependent protease ATP-binding subunit 2073941-2075242 - 433 15641925 tig VC1923 - COG0544O trigger factor 2113168-2113659 + 163 15641964 - VC1962 - COG3015MP lipoprotein 2152265-2153260 + 331 15642002 - VC2000 - COG0057G glyceraldehyde-3-phosphate dehydrogenase 2166647-2168149 - 500 15642015 - VC2013 - COG1263G PTS system, glucose-specific IIBC component 2174580-2175326 - 248 15642023 fabG VC2021 - COG1028IQR 3-ketoacyl-(acyl-carrier-protein) reductase 2175342-2176280 - 312 15642024 - VC2022 - COG0331I acyl carrier protein S-malonyltransferase 2178326-2178496 - 56 15642027 - VC2025 - COG0333J 50S ribosomal protein L32 2187618-2190302 - 894 15642035 - VC2033 - COG1012C,COG1454C alcohol dehydrogenase/acetaldehyde dehydrogenase 2202606-2202938 - 110 15642046 - VC2044 - COG0278O hypothetical protein 2203190-2203774 + 194 15642047 - VC2045 - COG0605P superoxide dismutase, Fe 2243201-2244073 - 290 15642084 - VC2084 - COG0074C succinyl-CoA synthetase alpha subunit 2244073-2245239 - 388 15642085 - VC2085 - COG0045C succinyl-CoA synthetase subunit beta 2245407-2246621 - 404 15642086 - VC2086 - COG0508C dihydrolipoamide acetyltransferase 2250274-2252040 - 588 15642089 sdhA VC2089 - COG1053C succinate dehydrogenase catalytic subunit 2259674-2260201 + 175 15642099 - VC2099 - COG0716C flavodoxin 2297661-2298794 - 377 15642142 - VC2143 - COG1344N flagellin 2318621-2320282 - 553 15642173 - VC2174 - COG0737F UDP-sugar hydrolase 2327823-2328767 + 314 15642182 - VC2183 - COG0462FE ribose-phosphate pyrophosphokinase 2329477-2330628 + 383 15642184 - VC2185 - COG0012J GTP-binding protein 2365293-2366258 - 321 15642211 - VC2213 - COG2885M outer membrane protein OmpA 2366554-2368083 - 509 15642212 gltX VC2214 - COG0008J glutamyl-tRNA synthetase 2396718-2397677 - 319 15642242 - VC2244 - COG0825I acetyl-CoA carboxylase alpha subunit 2405587-2406096 - 169 15642249 - VC2251 - COG2825M outer membrane protein OmpH 2412887-2413444 - 185 15642255 frr VC2257 - - ribosome releasing factor 2413498-2414229 - 243 15642256 - VC2258 - COG0528F uridylate kinase 2414417-2415259 - 280 15642257 tsf VC2259 - - elongation factor Ts 2415391-2416119 - 242 15642258 - VC2260 - - 30S ribosomal protein S2 2422308-2422778 - 156 15642265 nusB VC2267 - COG0781K transcription antitermination protein NusB 2444923-2446149 - 408 15642288 - VC2290 - COG2871C Na(+)-translocating NADH-quinone reductase subunit F 2446787-2447419 - 210 15642290 - VC2292 - COG1347C NADH-ubiquinone oxidoreductase 2447419-2448192 - 257 15642291 - VC2293 - COG2869C Na(+)-translocating NADH-quinone reductase subunit C 2495396-2497483 - 695 15642339 - VC2342 - COG0480J elongation factor EF-2 2503591-2504316 - 241 15642344 - VC2347 - COG0813F purine nucleoside phosphorylase 2507071-2507850 - 259 15642347 - VC2350 - COG0274F deoxyribose-phosphate aldolase 2508452-2509708 - 418 15642349 - VC2352 - - NupC family protein 2517140-2517517 + 125 15642358 - VC2361 - COG3445R formate acetyl transferase-related protein 2524550-2525266 + 238 15642365 - VC2368 - COG0745TK aerobic respiration control protein FexA 2544258-2544953 + 231 15642376 - VC2379 - COG0775F 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2554049-2557279 - 1076 15642386 carB VC2389 - COG0458EF carbamoyl-phosphate synthase large subunit 2560390-2563101 - 903 15642391 - VC2394 - COG0653U translocase 2581292-2582719 - 475 15642409 - VC2412 - COG1249C dihydrolipoamide dehydrogenase 2582987-2584894 - 635 15642410 - VC2413 - COG0508C dihydrolipoamide acetyltransferase 2584895-2587555 - 886 15642411 - VC2414 - COG2609C pyruvate dehydrogenase, E1 component 2626616-2627917 - 433 15642443 eno VC2447 - COG0148G phosphopyruvate hydratase 2627996-2629633 - 545 15642444 - VC2448 - COG0504F CTP synthetase 2645187-2646980 - 597 15642459 - VC2463 - COG0481M GTP-binding protein LepA 2659090-2659746 + 218 15642476 - VC2480 - COG0120G ribose-5-phosphate isomerase A 2688698-2691559 + 953 15642499 - VC2503 - COG0525J valyl-tRNA synthetase 2701112-2701501 + 129 15642508 - VC2512 - COG0251J hypothetical protein 2718330-2718911 + 193 15642531 - VC2536 - - hypothetical protein 2726081-2726611 + 176 15642540 - VC2545 - COG0221C inorganic pyrophosphatase 2749721-2750350 + 209 15642563 - VC2568 - COG0545O peptidyl-prolyl cis-trans isomerase, FKBP-type 2751112-2751498 - 128 15642565 - VC2570 - COG0203J 50S ribosomal protein L17 2751525-2752517 - 330 15642566 - VC2571 - COG0202K DNA-directed RNA polymerase alpha subunit 2752542-2753162 - 206 15642567 - VC2572 - COG0522J 30S ribosomal protein S4 2753190-2753579 - 129 15642568 - VC2573 - COG0100J 30S ribosomal protein S11 2755612-2756046 - 144 15642572 - VC2577 - COG0200J 50S ribosomal protein L15 2756052-2756228 - 58 15642573 - VC2578 - COG1841J 50S ribosomal protein L30 2756235-2756738 - 167 15642574 rpsE VC2579 - COG0098J 30S ribosomal protein S5 2756753-2757106 - 117 15642575 - VC2580 - COG0256J 50S ribosomal protein L18 2757116-2757649 - 177 15642576 - VC2581 - COG0097J 50S ribosomal protein L6 2757664-2758056 - 130 15642577 - VC2582 - - 30S ribosomal protein S8 2758086-2758391 - 101 15642578 - VC2583 - COG0199J 30S ribosomal protein S14 2758409-2758948 - 179 15642579 - VC2584 - COG0094J 50S ribosomal protein L5 2758973-2759290 - 105 15642580 - VC2585 - COG0198J 50S ribosomal protein L24 2759303-2759674 - 123 15642581 - VC2586 - - 50S ribosomal protein L14 2759837-2760091 - 84 15642582 - VC2587 - COG0186J 30S ribosomal protein S17 2760091-2760282 - 63 15642583 rpmC VC2588 - - 50S ribosomal protein L29 2760282-2760692 - 136 15642584 - VC2589 - COG0197J 50S ribosomal protein L16 2760704-2761405 - 233 15642585 rpsC VC2590 - COG0092J 30S ribosomal protein S3 2761425-2761757 - 110 15642586 - VC2591 - - 50S ribosomal protein L22 2762067-2762891 - 274 15642588 - VC2593 - COG0090J 50S ribosomal protein L2 2762908-2763210 - 100 15642589 - VC2594 - COG0089J 50S ribosomal protein L23 2763207-2763809 - 200 15642590 - VC2595 - - 50S ribosomal protein L4 2763826-2764455 - 209 15642591 - VC2596 - - 50S ribosomal protein L3 2764470-2764781 - 103 15642592 - VC2597 - COG0051J 30S ribosomal protein S10 2771350-2772648 - 432 15642597 - VC2602 - - adenylosuccinate synthetase 2773919-2774524 - 201 15642599 - VC2604 - COG1047O peptidyl-prolyl cis-trans isomerase, FKBP-type 2782257-2782889 + 210 15642609 - VC2614 - COG0664T cyclic AMP receptor protein 2813924-2815138 - 404 15642637 - VC2642 - COG0137E argininosuccinate synthase 2824274-2824738 - 154 15642648 - VC2653 - COG1952U export protein SecB 2826752-2828560 + 602 15642651 - VC2656 - COG1053C fumarate reductase 2828560-2829318 + 252 15642652 - VC2657 - COG0479C succinate dehydrogenase 2830191-2830757 - 188 15642655 - VC2660 - COG0231J elongation factor P 2831849-2832424 - 191 15642657 - VC2662 - - hypothetical protein 2832620-2834254 - 544 15642659 groEL VC2664 - COG0459O chaperonin GroEL 2837230-2838027 + 265 15642665 - VC2670 - COG0149G triosephosphate isomerase 2847810-2848028 + 72 15642674 - VC2679 - COG0254J 50S ribosomal protein L31 2855136-2855378 - 80 15642681 - VC2686 - - hypothetical protein 2856783-2857778 - 331 15642684 pfkA VC2689 - COG0205G 6-phosphofructokinase 2864958-2866409 + 483 15642693 - VC2698 - COG1027E aspartate ammonia-lyase 2880672-2880944 + 90 15642703 rpoZ VC2709 - COG1758K DNA-directed RNA polymerase omega subunit 2894731-2895318 + 195 15642714 - VC2720 - COG0316S,COG0694O hypothetical protein 2901967-2902407 - 146 15642724 - VC2730 - COG2165NU general secretion pathway protein G 2910015-2911643 + 542 15642731 - VC2738 - COG1866C phosphoenolpyruvate carboxykinase 2916766-2918595 - 609 15642737 - VC2744 - COG1217T GTP-binding protein TypA 2919083-2920492 + 469 15642739 glnA VC2746 - - glutamine synthetase