Yersinia pestis CO92, complete genome - 1..4653728 Location Strand Length PID Gene Synonym Code COG Product 33131-34540 - 469 16120377 glnA YPO0024 - - glutamine synthetase 35102-36925 + 607 16120379 bipA YPO0026 - COG1217T putative GTPase 52433-52708 - 91 16120392 rpoZ YPO0039 - COG1758K DNA-directed RNA polymerase omega subunit 62928-63095 + 55 16120404 rpmG YPO0051 - COG0267J 50S ribosomal protein L33 69009-69941 - 310 16120411 rfaD YPO0058 - COG0451MG ADP-L-glycero-D-manno-heptose-6-epimerase 74909-76456 - 515 16120415 - YPO0064 - COG0696G phosphoglyceromutase 77742-78218 + 158 16120418 secB YPO0067 - COG1952U export protein SecB 96170-96937 - 255 16120436 tpiA YPO0085 - COG0149G triosephosphate isomerase 109863-110102 + 79 16120447 - YPO0100 - - hypothetical protein 119972-120187 + 71 16120457 rpmE YPO0111 - COG0254J 50S ribosomal protein L31 210924-211511 + 195 16120532 slyD YPO0193 - COG1047O peptidyl-prolyl cis-trans isomerase 212265-213065 + 266 16120534 fkpA YPO0195 - COG0545O peptidyl-prolyl cis-trans isomerase 215246-215620 + 124 16120539 rpsl YPO0200 - - 30S ribosomal protein S12 215717-216187 + 156 16120540 rpsG YPO0201 - COG0049J 30S ribosomal protein S7 216281-218389 + 702 16120541 fusA YPO0202 - COG0480J elongation factor G 218462-219646 + 394 16120542 tuf YPO0203 - COG0050J elongation factor Tu 221655-221966 + 103 16120546 rpsJ YPO0209 - COG0051J 30S ribosomal protein S10 221999-222628 + 209 16120547 rplC YPO0210 - - 50S ribosomal protein L3 222645-223250 + 201 16120548 rplD YPO0211 - - 50S ribosomal protein L4 223247-223549 + 100 16120549 rplW YPO0212 - COG0089J 50S ribosomal protein L23 223566-224390 + 274 16120550 rplB YPO0213 - COG0090J 50S ribosomal protein L2 224698-225030 + 110 16120552 rplV YPO0215 - - 50S ribosomal protein L22 225048-225746 + 232 16120553 rpsC YPO0216 - COG0092J 30S ribosomal protein S3 227177-227491 + 104 16120558 rplX YPO0221 - COG0198J 50S ribosomal protein L24 227506-228045 + 179 16120559 rplE YPO0222 - COG0094J 50S ribosomal protein L5 228398-228790 + 130 16120561 rpsH YPO0223 - - 30S ribosomal protein S8 229348-229701 + 117 16120563 rplR YPO0225 - COG0256J 50S ribosomal protein L18 229716-230219 + 167 16120564 rpsE YPO0226 - COG0098J 30S ribosomal protein S5 230222-230401 + 59 16120565 rpmD YPO0227 - COG1841J 50S ribosomal protein L30 230405-230839 + 144 16120566 rplO YPO0228 - COG0200J 50S ribosomal protein L15 232212-232328 + 38 16120568 rpmJ YPO0230 - COG0257J 50S ribosomal protein L36 232476-232832 + 118 16120569 rpsM YPO0231 - COG0099J 30S ribosomal protein S13 232849-233238 + 129 16120570 rpsK YPO0232 - COG0100J 30S ribosomal protein S11 233269-233889 + 206 16120571 rpsD YPO0233 - COG0522J 30S ribosomal protein S4 234945-235334 + 129 16120573 rplQ YPO0235 - COG0203J 50S ribosomal protein L17 299025-299603 + 192 16120637 terD YPO0298 - COG2310T tellurium resistance protein 299787-300362 + 191 16120638 terE YPO0299 - COG2310T tellurium resistance protein 361243-361536 + 97 16120685 groES YPO0350 - COG0234O co-chaperonin GroES 361583-363229 + 548 16120686 groEL YPO0351 - COG0459O chaperonin GroEL 365600-366166 + 188 16120689 efp YPO0354 - COG0231J elongation factor P 368384-369118 - 244 16120694 frdB YPO0359 - COG0479C succinate dehydrogenase 389875-391134 + 419 16120710 hflK YPO0375 - COG0330O hypothetical protein 392614-393912 + 432 16120713 purA YPO0378 - - adenylosuccinate synthetase 459643-460866 + 407 16120770 deoB YPO0439 - COG1015G phosphopentomutase 490204-491157 + 317 16120792 talB YPO0463 - - transaldolase 497339-499249 + 636 16120797 dnaK YPO0468 - COG0443O molecular chaperone DnaK 503087-503350 - 87 16120801 rpsT YPO0472 - COG0268J 30S ribosomal protein S20 605874-607025 + 383 16120888 ftsZ YPO0560 - COG0206D cell division protein FtsZ 609376-612090 + 904 16120892 secA YPO0564 - COG0653U translocase 692692-692850 - 52 16120958 - YPO0634 - - hypothetical protein 699212-701050 - 612 16120968 rpoD YPO0643 - COG0568K RNA polymerase sigma factor 703092-703307 - 71 16120970 rpsU YPO0645 - COG0828J 30S ribosomal protein S21 797110-798309 + 399 16121056 flaA2 YPO0738 - COG1344N putative flagellin 798592-799797 + 401 16121057 flaA3 YPO0739 - COG1344N putative flagellin 994379-994765 - 128 16121211 gcsH YPO0906 - COG0509E glycine cleavage system protein H 1009783-1010862 - 359 16121225 fbaA YPO0920 - COG0191G fructose-bisphosphate aldolase 1010982-1012145 - 387 16121226 pgk YPO0921 - - phosphoglycerate kinase 1016330-1018324 - 664 16121231 tktA YPO0926 - COG0021G transketolase 1023523-1024677 + 384 16121235 metK YPO0931 - COG0192H S-adenosylmethionine synthetase 1080046-1080537 - 163 16121277 - YPO0973 - - hypothetical protein 1180398-1181222 - 274 16121341 dapD YPO1041 - COG2171E 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 1185364-1186089 + 241 16121344 rpsB YPO1044 - - 30S ribosomal protein S2 1186217-1187074 + 285 16121345 tsf YPO1045 - - elongation factor Ts 1195917-1196414 + 165 16121353 ompH YPO1053 - COG2825M cationic 19 kDa outer membrane protein precursor 1213727-1214542 - 271 16121372 - YPO1071 - COG1464P putative lipoprotein 1251398-1252678 - 426 16121408 gltA YPO1108 - COG0372C citrate synthase 1261180-1262346 + 388 16121415 sucC YPO1115 - COG0045C succinyl-CoA synthetase subunit beta 1262346-1263218 + 290 16121416 sucD YPO1116 - COG0074C succinyl-CoA synthetase alpha subunit 1268903-1270069 + 388 16121423 tolA YPO1123 - COG3064M cell envelope integrity inner membrane protein TolA 1271532-1272038 + 168 16121425 pal YPO1125 - COG2885M peptidoglycan-associated lipoprotein Pal 1280296-1281048 - 250 16121432 gpmA YPO1133 - COG0588G phosphoglyceromutase 1334740-1335213 + 157 16121481 - YPO1186 - - hypothetical protein 1359182-1360624 - 480 16121498 katA YPO1207 - COG0753P catalase 1365664-1366794 - 376 16121504 nrdB YPO1213 - COG0208F ribonucleotide-diphosphate reductase beta subunit 1366957-1369245 - 762 16121505 nrdA YPO1214 - COG0209F ribonucleotide-diphosphate reductase alpha subunit 1382162-1383277 + 371 120401027 ompC YPO1222 - - outer membrane protein C, porin 1420786-1421070 - 94 16121550 rplY YPO1264 - COG1825J 50S ribosomal protein L25 1494106-1494369 - 87 16121609 grxA YPO1327 - COG0695O glutaredoxin 1 1514818-1515549 - 243 16121631 artI YPO1351 - COG0834ET arginine-binding periplasmic protein 1 precursor 1538760-1538978 - 72 16121650 infA YPO1370 - COG0361J translation initiation factor IF-1 1558055-1560337 - 760 16121663 pflB YPO1383 - COG1882C formate acetyltransferase 1 1572210-1573883 + 557 16121672 rpsA YPO1392 - COG0539J 30S ribosomal protein S1 1597698-1598888 - 396 16121690 aspC YPO1410 - COG1448E aspartate aminotransferase 1599145-1600227 - 360 16121691 - YPO1411 - COG3203M putative outer membrane porin C protein 1627192-1628253 - 353 16121713 ompA YPO1435 - COG2885M putative outer membrane porin A protein 1662274-1662765 + 163 16121745 - YPO1470 - - hypothetical protein 1711305-1712312 + 335 16121780 mglB YPO1507 - COG1879G galactose-binding protein 1756276-1757685 + 469 16121814 gnd YPO1541 - COG0362G 6-phosphogluconate dehydrogenase 1777163-1777480 + 105 16121831 - YPO1560 - - hypothetical protein 1789948-1791315 - 455 16121840 argG YPO1570 - COG0137E argininosuccinate synthase 1820059-1820226 + 55 16121863 - YPO1595 - COG0333J 50S ribosomal protein L32 1824120-1824356 + 78 16121868 acpP YPO1600 - COG0236IQ acyl carrier protein 1866223-1867476 + 417 16121909 icdA YPO1641 - COG0538C isocitrate dehydrogenase 1883773-1883985 + 70 16121922 - YPO1655 - - cold shock protein 1989489-1989698 + 69 16122003 - YPO1746 - - cold shock protein 2086661-2087770 + 369 16122093 fliC YPO1842 - COG1344N flagellin 2282141-2283232 - 363 16122253 - YPO2010 - COG0012J hypothetical protein 2333917-2334660 + 247 16122294 - YPO2055 - - hypothetical protein 2427149-2428153 - 334 16122389 gapA YPO2157 - COG0057G glyceraldehyde-3-phosphate dehydrogenase 2452605-2455280 - 891 16122410 adhE YPO2180 - COG1012C,COG1454C aldehyde-alcohol dehydrogenase 2606217-2606501 + 94 16122542 asr YPO2318 - - putative acid shock protein 2613025-2613630 + 201 16122547 acpD YPO2323 - COG1182I acyl carrier protein phosphodiesterase 2636489-2636992 + 167 16122566 tpx YPO2342 - COG2077O thiol peroxidase 2689564-2690976 + 470 16122616 pykF YPO2393 - - pyruvate kinase 2691297-2691533 + 78 16122617 lpp YPO2394 - - major outer membrane lipoprotein 2731960-2732316 - 118 16122651 rplT YPO2430 - - 50S ribosomal protein L20 2732354-2732551 - 65 16122652 rpmI YPO2431 - COG0291J 50S ribosomal protein L35 2816610-2817134 - 174 16122727 ompX YPO2506 - COG3637M outer membrane protein X 2822515-2823258 + 247 16122733 glnH YPO2512 - COG0834ET glutamine ABC transporter periplasmic-binding protein 2830226-2830486 + 86 16122740 - YPO2521 - - hypothetical protein 2860817-2861359 - 180 16122766 nuoI YPO2548 - COG1143C NADH dehydrogenase subunit I 2866561-2867079 - 172 16122770 nuoE YPO2552 - COG1905C ATP synthase subunit E 2879734-2880936 + 400 16122784 ackA YPO2566 - COG0282C acetate/propionate kinase 2881104-2883257 + 717 16122785 pta YPO2567 - COG0280C,COG0857R phosphate acetyltransferase 2917054-2917263 + 69 16122808 cspE YPO2595 - - cold shock protein E 2930913-2933495 - 860 16122823 leuS YPO2610 - COG0495J leucyl-tRNA synthetase 2964398-2964925 - 175 16122846 fldA YPO2635 - COG0716C flavodoxin 2984316-2984528 + 70 16122865 cspB YPO2659 - - cold shock protein 3032552-3032935 + 127 16122909 - YPO2705 - COG3445R hypothetical protein 3089861-3091084 + 407 16122961 fabB YPO2757 - COG0304IQ 3-oxoacyl-(acyl carrier protein) synthase 3092975-3093505 + 176 16122963 - YPO2759 - COG3539NU putative mannose-resistant/Proteus-like fimbrial protein 3205218-3206681 - 487 16123063 guaB YPO2871 - COG0516F,COG0517R inositol-5-monophosphate dehydrogenase 3219476-3219904 - 142 16123075 ndk YPO2883 - - nucleoside diphosphate kinase 3238947-3240176 - 409 16123087 - YPO2896 - COG1104E cysteine desulfurase 3241772-3242575 + 267 16123090 - YPO2899 - COG0483G putative inositol monophosphatase family protein 3249072-3250325 - 417 16123098 glyA YPO2907 - COG0112E serine hydroxymethyltransferase 3253589-3253927 - 112 16123100 glnB YPO2911 - COG0347E nitrogen regulatory protein P-II 3272776-3273036 + 86 16123114 fdx YPO2927 - - putative [4Fe-4S] ferredoxin 3279799-3280284 - 161 16123122 - YPO2937 - - hypothetical protein 3288399-3288944 - 181 16123128 - YPO2945 - COG3539NU frimbrial protein 3343372-3343629 + 85 16123174 ptsH YPO2993 - COG1925G PTS system, phosphocarrier protein 3345454-3345963 + 169 16123176 crr YPO2995 - - glucose-specific PTS system enzyme IIA component 3430215-3430709 + 164 16123251 ppiB YPO3074 - COG0652O peptidyl-prolyl cis-trans isomerase B 3439389-3440303 + 304 16123260 - YPO3083 - COG0330O hypothetical protein 3475023-3475667 - 214 16123283 adk YPO3118 - COG0563F adenylate kinase 3516043-3516315 - 90 16123316 hupB YPO3154 - - DNA-binding protein HU-beta 3521644-3522948 - 434 16123320 tig YPO3158 - COG0544O trigger factor 3544644-3545114 - 156 16123344 ribH YPO3182 - - riboflavin synthase subunit beta 3552167-3552502 - 111 16123352 yajC YPO3190 - COG1862U preprotein translocase subunit YajC 3555984-3556586 + 200 16123356 ahpC YPO3194 - COG0450O putative alkyl hydroperoxide reductase subunit c 3671971-3672318 - 115 16123445 rplS YPO3292 - - 50S ribosomal protein L19 3673748-3673996 - 82 16123448 rpsP YPO3295 - - 30S ribosomal protein S16 3687182-3688252 - 356 16123460 recA YPO3307 - COG0468L recombinase A 3764439-3765734 - 431 16123525 eno YPO3376 - COG0148G phosphopyruvate hydratase 3817028-3818455 - 475 16123566 lpdA YPO3417 - COG1249C dihydrolipoamide dehydrogenase 3818758-3820287 - 509 16123567 aceF YPO3418 - COG0508C dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex 3820301-3822964 - 887 16123568 aceE YPO3419 - COG2609C pyruvate dehydrogenase E1 component 3848237-3851134 + 965 16123591 valS YPO3443 - COG0525J valyl-tRNA synthetase 3852287-3852718 - 143 16123593 - YPO3445 - COG3076S hypothetical protein 3895290-3897284 - 664 16123634 deaD YPO3488 - COG0513LKJ cold-shock dead-box protein A 3898480-3900597 - 705 16123636 pnp YPO3490 - COG1185J polyribonucleotide nucleotidyltransferase 3902305-3902574 - 89 16123639 rpsO YPO3493 - - 30S ribosomal protein S15 3903670-3904080 - 136 16123641 rbfA YPO3495 - COG0858J ribosome-binding factor A 3904146-3906800 - 884 16123642 infB YPO3496 - COG0532J translation initiation factor IF-2 3906825-3908312 - 495 16123643 nusA YPO3497 - COG0195K transcription elongation factor NusA 3921623-3921880 - 85 16123657 rpmA YPO3511 - - 50S ribosomal protein L27 3921900-3922211 - 103 16123658 rplU YPO3512 - - 50S ribosomal protein L21 3930365-3930892 + 175 16123667 ppa YPO3521 - COG0221C inorganic pyrophosphatase 3947900-3948352 - 150 16123682 rplI YPO3536 - COG0359J 50S ribosomal protein L9 3948392-3948619 - 75 16123683 rpsR YPO3537 - - 30S ribosomal protein S18 3948950-3949342 - 130 16123685 rpsF YPO3539 - COG0360J 30S ribosomal protein S6 3975643-3976035 - 130 16123706 rpsI YPO3562 - - 30S ribosomal protein S9 3976050-3976478 - 142 16123707 rplM YPO3563 - - 50S ribosomal protein L13 3998123-3998509 + 128 16123732 - YPO3590 - COG0251J hypothetical protein 4065083-4065295 - 70 16123785 cspa2 YPO3643 - - major cold shock protein Cspa2 4065555-4065767 - 70 16123786 cspa1 YPO3644 - - major cold shock protein Cspa1 4073149-4073445 - 98 16123796 fiS YPO3654 - COG2901KL DNA-binding protein Fis 4079025-4080374 - 449 16123801 accC YPO3658 - COG0439I acetyl-CoA carboxylase 4080386-4080850 - 154 16123802 accB YPO3659 - COG0511I acetyl-CoA carboxylase 4087297-4088340 + 347 16123808 mreB YPO3665 - COG1077D rod shape-determining protein MreB 4142000-4142518 + 172 16123846 - YPO3708 - - hypothetical protein 4144571-4145842 - 423 16123849 lamB YPO3711 - - maltoporin precursor 4147824-4149035 + 403 16123852 malE YPO3714 - COG2182G periplasmic maltose-binding protein 4152388-4154034 - 548 16123856 pgi YPO3718 - COG0166G glucose-6-phosphate isomerase 4184904-4185179 - 91 16123868 hupA YPO3731 - - DNA-binding protein HU-alpha 4197264-4201484 - 1406 16123883 rpoC YPO3746 - COG0086K DNA-directed RNA polymerase beta' subunit 4201613-4205641 - 1342 16123884 rpoB YPO3747 - COG0085K DNA-directed RNA polymerase beta subunit 4205984-4206352 - 122 16123885 rplL YPO3748 - COG0222J 50S ribosomal protein L7/L12 4206419-4206916 - 165 16123886 rplJ YPO3749 - COG0244J 50S ribosomal protein L10 4207281-4207985 - 234 16123887 rplA YPO3750 - - 50S ribosomal protein L1 4207989-4208417 - 142 16123888 rplK YPO3751 - - 50S ribosomal protein L11 4209789-4210973 - 394 16123891 tuf YPO3754 - COG0050J elongation factor Tu 4274244-4275359 - 371 16123942 livK YPO3808 - COG0683E branched-chain amino acid-binding protein 4332277-4333407 - 376 16123994 rffA YPO3859 - COG0399M putative lipopolysaccharide biosynthesis protein 4336364-4337626 - 420 16123998 rffD YPO3863 - COG0677M putative UDP-glucose/GDP-mannose dehydrogenase 4362378-4363856 - 492 16124021 ilvC YPO3888 - COG0059EH ketol-acid reductoisomerase 4370065-4371915 - 616 16124030 ilvD YPO3897 - - dihydroxy-acid dehydratase 4372226-4373152 - 308 16124031 ilvE YPO3899 - COG0115EH branched-chain amino acid aminotransferase 4398338-4399069 + 243 16124048 - YPO3916 - COG0678O,COG0695O putative peroxiredoxin/glutaredoxin family protein 4511834-4513441 - 535 16124128 dppA YPO4003 - COG0747E periplasmic dipeptide transport protein 4580167-4580790 + 207 16124175 sodA YPO4061 - COG0605P superoxide dismutase 4584782-4585138 - 118 16124179 - YPO4065 - - hypothetical protein